RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 SENP2Q9HC62 589 aa17.02■□□□□ 0.31
CCDC144A-205ENST00000399264 NWD2Q9ULI1 1742 aa17.01■□□□□ 0.31
CCDC144A-205ENST00000399264 MCAMP43121 646 aa17.01■□□□□ 0.31
CCDC144A-205ENST00000399264 PIGBQ92521 554 aa17.01■□□□□ 0.31
CCDC144A-205ENST00000399264 PRIMPOLQ96LW4 560 aa17.01■□□□□ 0.31
CCDC144A-205ENST00000399264 KIF28PB7ZC32 967 aa17.01■□□□□ 0.31
CCDC144A-205ENST00000399264 ZMYND15Q9H091 742 aa17.01■□□□□ 0.31
CCDC144A-205ENST00000399264 NBPF3Q9H094 633 aa17.01■□□□□ 0.31
CCDC144A-205ENST00000399264 GOLGA8BA8MQT2 603 aa17■□□□□ 0.31
CCDC144A-205ENST00000399264 UBE2Q2LH0YL09 131 aa17■□□□□ 0.31
CCDC144A-205ENST00000399264 GPAA1O43292 621 aa17■□□□□ 0.31
CCDC144A-205ENST00000399264 NDUFA8P51970 172 aa17■□□□□ 0.31
CCDC144A-205ENST00000399264 NKX1-1Q15270 411 aaPredicted RBP17■□□□□ 0.31
CCDC144A-205ENST00000399264 HELBQ8NG08 1087 aaPredicted RBP17■□□□□ 0.31
CCDC144A-205ENST00000399264 IFIT5Q13325 482 aaKnown RBP17■□□□□ 0.31
CCDC144A-205ENST00000399264 CCDC73Q6ZRK6 1079 aa17■□□□□ 0.31
CCDC144A-205ENST00000399264 MB21D2Q8IYB1 491 aaPredicted RBP17■□□□□ 0.31
CCDC144A-205ENST00000399264 BCL2L12Q9HB09 334 aa17■□□□□ 0.31
CCDC144A-205ENST00000399264 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
CCDC144A-205ENST00000399264 EVA1CP58658 441 aa16.99■□□□□ 0.31
CCDC144A-205ENST00000399264 DHX40Q8IX18 779 aaKnown RBP16.99■□□□□ 0.31
CCDC144A-205ENST00000399264 COL5A2P05997 1499 aaPredicted RBP16.99■□□□□ 0.31
CCDC144A-205ENST00000399264 KINO60870 393 aaKnown RBP16.99■□□□□ 0.31
CCDC144A-205ENST00000399264 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
CCDC144A-205ENST00000399264 METTL24Q5JXM2 366 aa16.99■□□□□ 0.31
CCDC144A-205ENST00000399264 LDHAL6AQ6ZMR3 332 aa16.99■□□□□ 0.31
CCDC144A-205ENST00000399264 ORC3Q9UBD5 711 aaPredicted RBP16.99■□□□□ 0.31
CCDC144A-205ENST00000399264 KIF3AQ9Y496 699 aa16.99■□□□□ 0.31
CCDC144A-205ENST00000399264 USP27XA6NNY8 438 aa16.98■□□□□ 0.31
CCDC144A-205ENST00000399264 BIN1O00499 593 aa16.98■□□□□ 0.31
CCDC144A-205ENST00000399264 FAM160A1Q05DH4 1040 aa16.98■□□□□ 0.31
CCDC144A-205ENST00000399264 NAA30Q147X3 362 aaPredicted RBP16.98■□□□□ 0.31
CCDC144A-205ENST00000399264 ISM2Q6H9L7 571 aa16.98■□□□□ 0.31
CCDC144A-205ENST00000399264 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
CCDC144A-205ENST00000399264 GOLGA6L19H0YKK7 550 aa16.98■□□□□ 0.31
CCDC144A-205ENST00000399264 ITGA6P23229 1130 aa16.98■□□□□ 0.31
CCDC144A-205ENST00000399264 ATP2B3Q16720 1220 aa16.98■□□□□ 0.31
CCDC144A-205ENST00000399264 FILIP1Q7Z7B0 1213 aa16.98■□□□□ 0.31
CCDC144A-205ENST00000399264 SLC4A9Q96Q91 983 aa16.98■□□□□ 0.31
CCDC144A-205ENST00000399264 UBR2Q8IWV8 1755 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 FMR1NBQ8N0W7 255 aaPredicted RBP16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 AOPEPQ8N6M6 819 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 C8orf76Q96K31 380 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 ZNF396Q96N95 335 aaPredicted RBP16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 PIH1D3Q9NQM4 214 aaKnown RBP16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 RIPOR2Q9Y4F9 1068 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 MYH15Q9Y2K3 1946 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 MYO5AQ9Y4I1 1855 aaKnown RBP16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 IDH1O75874 414 aaKnown RBP16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 CSF1RP07333 972 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 SLC9C2Q5TAH2 1124 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 TBC1D10CQ8IV04 446 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 LINC00301Q8NCQ3 95 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 TTLL11Q8NHH1 800 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 APPBP2Q92624 585 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 SDF4Q9BRK5 362 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 CARD10Q9BWT7 1032 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 GTF2F1P35269 517 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 STX1AQ16623 288 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 CYB5R4Q7L1T6 521 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 KLHL34Q8N239 644 aa16.97■□□□□ 0.31
CCDC144A-205ENST00000399264 BECN2A8MW95 431 aa16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 ZNF213O14771 459 aa16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 APPP05067 770 aa16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 PCCAP05165 728 aaPredicted RBP16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 TPM3P06753 285 aa16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 MARCKSP29966 332 aaPredicted RBP16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 EVCP57679 992 aa16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 ZBTB38Q8NAP3 1195 aaPredicted RBP16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 FBXO18Q8NFZ0 1043 aa16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 MYL10Q9BUA6 226 aa16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 AKAP2Q9Y2D5 859 aa16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 ABCC6O95255 1503 aa16.96■□□□□ 0.31
CCDC144A-205ENST00000399264 STK38Q15208 465 aa16.96■□□□□ 0.3
CCDC144A-205ENST00000399264 DPCR1Q3MIW9 517 aa16.96■□□□□ 0.3
CCDC144A-205ENST00000399264 PHKBQ93100 1093 aa16.96■□□□□ 0.3
CCDC144A-205ENST00000399264 TBC1D2BQ9UPU7 963 aa16.96■□□□□ 0.3
CCDC144A-205ENST00000399264 RIC1Q4ADV7 1423 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 PHKA1P46020 1223 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 SF3A1Q15459 793 aaKnown RBP16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 STK11IPQ8N1F8 1099 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 MRPS27Q92552 414 aaKnown RBP16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 PRDM10Q9NQV6 1147 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 CNNM1Q9NRU3 951 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 NEDD4P46934 1319 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 CPLX1O14810 134 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 NLRP10Q86W26 655 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 RTEL1Q9NZ71 1219 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 CTNNA3Q9UI47 895 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 WWC3Q9ULE0 1092 aa16.95■□□□□ 0.3
CCDC144A-205ENST00000399264 DCCP43146 1447 aa16.94■□□□□ 0.3
CCDC144A-205ENST00000399264 TNS2Q63HR2 1409 aa16.94■□□□□ 0.3
CCDC144A-205ENST00000399264 RALYLQ86SE5 291 aaKnown RBP16.94■□□□□ 0.3
CCDC144A-205ENST00000399264 NCOA7Q8NI08 942 aa16.94■□□□□ 0.3
CCDC144A-205ENST00000399264 SYTL4Q96C24 671 aaPredicted RBP16.94■□□□□ 0.3
CCDC144A-205ENST00000399264 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
CCDC144A-205ENST00000399264 B4E1Z4 1266 aa16.94■□□□□ 0.3
CCDC144A-205ENST00000399264 MYSM1Q5VVJ2 828 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms