RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 HSPD1P10809 573 aaKnown RBP18.09■□□□□ 0.49
COL25A1-201ENST00000399126 KLRK1P26718 216 aa18.09■□□□□ 0.49
COL25A1-201ENST00000399126 PRR5LQ6MZQ0 368 aa18.09■□□□□ 0.49
COL25A1-201ENST00000399126 SPATA5Q8NB90 893 aa18.09■□□□□ 0.49
COL25A1-201ENST00000399126 WWC3Q9ULE0 1092 aa18.09■□□□□ 0.49
COL25A1-201ENST00000399126 FOXP2O15409 715 aa18.08■□□□□ 0.49
COL25A1-201ENST00000399126 LARGE1O95461 756 aa18.08■□□□□ 0.49
COL25A1-201ENST00000399126 GYG1P46976 350 aa18.08■□□□□ 0.49
COL25A1-201ENST00000399126 RPS8P62241 208 aaKnown RBP18.08■□□□□ 0.49
COL25A1-201ENST00000399126 POTEAQ6S8J7 498 aa18.08■□□□□ 0.49
COL25A1-201ENST00000399126 TNPO1Q92973 898 aaKnown RBP18.08■□□□□ 0.49
COL25A1-201ENST00000399126 MCM2P49736 904 aa18.08■□□□□ 0.48
COL25A1-201ENST00000399126 SLC9C2Q5TAH2 1124 aa18.08■□□□□ 0.48
COL25A1-201ENST00000399126 UQCRFS1P1P0C7P4 283 aa18.07■□□□□ 0.48
COL25A1-201ENST00000399126 RAB3GAP1Q15042 981 aa18.07■□□□□ 0.48
COL25A1-201ENST00000399126 TTLL5Q6EMB2 1281 aa18.07■□□□□ 0.48
COL25A1-201ENST00000399126 TM6SF1Q9BZW5 370 aa18.07■□□□□ 0.48
COL25A1-201ENST00000399126 PDRG1Q9NUG6 133 aa18.07■□□□□ 0.48
COL25A1-201ENST00000399126 CIZ1Q9ULV3 898 aaPredicted RBP18.07■□□□□ 0.48
COL25A1-201ENST00000399126 CYP46A1Q9Y6A2 500 aa18.07■□□□□ 0.48
COL25A1-201ENST00000399126 CUL4AQ13619 759 aa18.07■□□□□ 0.48
COL25A1-201ENST00000399126 RNF20Q5VTR2 975 aa18.07■□□□□ 0.48
COL25A1-201ENST00000399126 DDR1Q08345 913 aa18.06■□□□□ 0.48
COL25A1-201ENST00000399126 STOX1Q6ZVD7 989 aa18.06■□□□□ 0.48
COL25A1-201ENST00000399126 U3KPZ7 1027 aaPredicted RBP18.06■□□□□ 0.48
COL25A1-201ENST00000399126 ADD2P35612 726 aa18.06■□□□□ 0.48
COL25A1-201ENST00000399126 APPBP2Q92624 585 aa18.06■□□□□ 0.48
COL25A1-201ENST00000399126 TFCP2L1Q9NZI6 479 aa18.06■□□□□ 0.48
COL25A1-201ENST00000399126 LAMA4Q16363 1823 aa18.05■□□□□ 0.48
COL25A1-201ENST00000399126 SERPINB2P05120 415 aa18.05■□□□□ 0.48
COL25A1-201ENST00000399126 ZFYP08048 801 aaPredicted RBP18.05■□□□□ 0.48
COL25A1-201ENST00000399126 DSCC1Q9BVC3 393 aa18.05■□□□□ 0.48
COL25A1-201ENST00000399126 COL1A1P02452 1464 aaPredicted RBP18.05■□□□□ 0.48
COL25A1-201ENST00000399126 DOCK2Q92608 1830 aa18.05■□□□□ 0.48
COL25A1-201ENST00000399126 ZNF532Q9HCE3 1301 aa18.05■□□□□ 0.48
COL25A1-201ENST00000399126 PDE6AP16499 860 aa18.05■□□□□ 0.48
COL25A1-201ENST00000399126 PLSCR1O15162 318 aa18.04■□□□□ 0.48
COL25A1-201ENST00000399126 GPAA1O43292 621 aa18.04■□□□□ 0.48
COL25A1-201ENST00000399126 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.04■□□□□ 0.48
COL25A1-201ENST00000399126 TTF1Q15361 905 aaPredicted RBP18.04■□□□□ 0.48
COL25A1-201ENST00000399126 TSGA10IPQ3SY00 556 aa18.04■□□□□ 0.48
COL25A1-201ENST00000399126 BLOC1S2Q6QNY1 142 aa18.04■□□□□ 0.48
COL25A1-201ENST00000399126 LIMCH1Q9UPQ0 1083 aa18.04■□□□□ 0.48
COL25A1-201ENST00000399126 TCRBV5S4A2TA0A5A2 114 aa18.03■□□□□ 0.48
COL25A1-201ENST00000399126 RPS6KB1P23443 525 aa18.03■□□□□ 0.48
COL25A1-201ENST00000399126 MCM4P33991 863 aa18.03■□□□□ 0.48
COL25A1-201ENST00000399126 UBE4AQ14139 1066 aa18.03■□□□□ 0.48
COL25A1-201ENST00000399126 TNS1Q9HBL0 1735 aaKnown RBP18.03■□□□□ 0.48
COL25A1-201ENST00000399126 LRRFIP1Q32MZ4 808 aaKnown RBP18.03■□□□□ 0.48
COL25A1-201ENST00000399126 COL23A1Q86Y22 540 aaPredicted RBP18.03■□□□□ 0.48
COL25A1-201ENST00000399126 AKT1S1Q96B36 256 aa18.03■□□□□ 0.48
COL25A1-201ENST00000399126 FAM84BQ96KN1 310 aaPredicted RBP18.03■□□□□ 0.48
COL25A1-201ENST00000399126 ZDHHC9Q9Y397 364 aa18.03■□□□□ 0.48
COL25A1-201ENST00000399126 ZNF804BA4D1E1 1349 aa18.02■□□□□ 0.48
COL25A1-201ENST00000399126 NCLP19338 710 aaKnown RBP18.02■□□□□ 0.48
COL25A1-201ENST00000399126 PSMA5P28066 241 aa18.02■□□□□ 0.48
COL25A1-201ENST00000399126 HAND2P61296 217 aa18.02■□□□□ 0.48
COL25A1-201ENST00000399126 MAGEB6Q8N7X4 407 aa18.02■□□□□ 0.48
COL25A1-201ENST00000399126 LRRC2Q9BYS8 371 aa18.02■□□□□ 0.48
COL25A1-201ENST00000399126 TPCN1Q9ULQ1 816 aa18.02■□□□□ 0.48
COL25A1-201ENST00000399126 POLRMTO00411 1230 aaKnown RBP18.02■□□□□ 0.47
COL25A1-201ENST00000399126 ST3GAL1Q11201 340 aa18.02■□□□□ 0.47
COL25A1-201ENST00000399126 FOXD4L5Q5VV16 416 aaPredicted RBP18.02■□□□□ 0.47
COL25A1-201ENST00000399126 TXNRD3Q86VQ6 643 aa18.02■□□□□ 0.47
COL25A1-201ENST00000399126 FOXD4L4Q8WXT5 416 aaPredicted RBP18.02■□□□□ 0.47
COL25A1-201ENST00000399126 TOB2Q14106 344 aaPredicted RBP18.01■□□□□ 0.47
COL25A1-201ENST00000399126 ME3Q16798 604 aa18.01■□□□□ 0.47
COL25A1-201ENST00000399126 CHAMP1Q96JM3 812 aa18.01■□□□□ 0.47
COL25A1-201ENST00000399126 NEK1Q96PY6 1258 aa18.01■□□□□ 0.47
COL25A1-201ENST00000399126 FGAP02671 866 aa18.01■□□□□ 0.47
COL25A1-201ENST00000399126 NECAB1Q8N987 351 aa18.01■□□□□ 0.47
COL25A1-201ENST00000399126 CWC22Q9HCG8 908 aaKnown RBP18.01■□□□□ 0.47
COL25A1-201ENST00000399126 UBE3CQ15386 1083 aa18■□□□□ 0.47
COL25A1-201ENST00000399126 CCDC83Q8IWF9 413 aa18■□□□□ 0.47
COL25A1-201ENST00000399126 SECISBP2LQ93073 1101 aaKnown RBP18■□□□□ 0.47
COL25A1-201ENST00000399126 GRAPQ13588 217 aa18■□□□□ 0.47
COL25A1-201ENST00000399126 ZSCAN25Q6NSZ9 544 aa18■□□□□ 0.47
COL25A1-201ENST00000399126 GRAPLQ8TC17 118 aaPredicted RBP18■□□□□ 0.47
COL25A1-201ENST00000399126 INTS4Q96HW7 963 aaKnown RBP18■□□□□ 0.47
COL25A1-201ENST00000399126 GPR101Q96P66 508 aaPredicted RBP18■□□□□ 0.47
COL25A1-201ENST00000399126 VPS37DQ86XT2 251 aa17.99■□□□□ 0.47
COL25A1-201ENST00000399126 ABCF2Q9UG63 623 aa17.99■□□□□ 0.47
COL25A1-201ENST00000399126 ST5P78524 1137 aa17.99■□□□□ 0.47
COL25A1-201ENST00000399126 KRT32Q14532 448 aa17.99■□□□□ 0.47
COL25A1-201ENST00000399126 JAG2Q9Y219 1238 aa17.99■□□□□ 0.47
COL25A1-201ENST00000399126 E7EWF7 191 aa17.98■□□□□ 0.47
COL25A1-201ENST00000399126 MAP3K12Q12852 859 aa17.98■□□□□ 0.47
COL25A1-201ENST00000399126 CAVIN4Q5BKX8 364 aa17.98■□□□□ 0.47
COL25A1-201ENST00000399126 MYH13Q9UKX3 1938 aa17.98■□□□□ 0.47
COL25A1-201ENST00000399126 CRY2Q49AN0 593 aa17.98■□□□□ 0.47
COL25A1-201ENST00000399126 CHST3Q7LGC8 479 aa17.98■□□□□ 0.47
COL25A1-201ENST00000399126 ADGRA1Q86SQ6 560 aa17.98■□□□□ 0.47
COL25A1-201ENST00000399126 RPGRQ92834 1020 aaKnown RBP17.98■□□□□ 0.47
COL25A1-201ENST00000399126 MSL1Q68DK7 614 aa17.97■□□□□ 0.47
COL25A1-201ENST00000399126 LRP2BPQ9P2M1 347 aa17.97■□□□□ 0.47
COL25A1-201ENST00000399126 MBD4O95243 580 aa17.97■□□□□ 0.47
COL25A1-201ENST00000399126 NUCB2P80303 420 aa17.97■□□□□ 0.47
COL25A1-201ENST00000399126 Q6ZUG5 572 aa17.97■□□□□ 0.47
COL25A1-201ENST00000399126 FBXO33Q7Z6M2 555 aa17.97■□□□□ 0.47
COL25A1-201ENST00000399126 MIGA1Q8NAN2 632 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms