RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ESPNB1AK53 854 aa20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 SLC9C2Q5TAH2 1124 aa20.87■□□□□ 0.93
HLA-DQB1-204ENST00000399084 ITPK1Q13572 414 aa20.86■□□□□ 0.93
HLA-DQB1-204ENST00000399084 VPS72Q15906 364 aa20.86■□□□□ 0.93
HLA-DQB1-204ENST00000399084 PUS7LQ9H0K6 701 aaKnown RBP20.86■□□□□ 0.93
HLA-DQB1-204ENST00000399084 LAMB2P55268 1798 aa20.85■□□□□ 0.93
HLA-DQB1-204ENST00000399084 NTSR2O95665 410 aa20.85■□□□□ 0.93
HLA-DQB1-204ENST00000399084 PDIA3P30101 505 aaKnown RBP20.85■□□□□ 0.93
HLA-DQB1-204ENST00000399084 MAP3K12Q12852 859 aa20.85■□□□□ 0.93
HLA-DQB1-204ENST00000399084 TRDNQ13061 729 aa20.85■□□□□ 0.93
HLA-DQB1-204ENST00000399084 RALYLQ86SE5 291 aaKnown RBP20.85■□□□□ 0.93
HLA-DQB1-204ENST00000399084 NSUN7Q8NE18 718 aaKnown RBP20.85■□□□□ 0.93
HLA-DQB1-204ENST00000399084 NIP7Q9Y221 180 aaKnown RBP eCLIP20.85■□□□□ 0.93
HLA-DQB1-204ENST00000399084 GOLGA6L4A6NEF3 574 aa20.84■□□□□ 0.93
HLA-DQB1-204ENST00000399084 FOXP2O15409 715 aa20.84■□□□□ 0.93
HLA-DQB1-204ENST00000399084 RC3H1Q5TC82 1133 aaKnown RBP20.84■□□□□ 0.93
HLA-DQB1-204ENST00000399084 MB21D2Q8IYB1 491 aaPredicted RBP20.84■□□□□ 0.93
HLA-DQB1-204ENST00000399084 SPATA5Q8NB90 893 aa20.84■□□□□ 0.93
HLA-DQB1-204ENST00000399084 ACSBG1Q96GR2 724 aa20.84■□□□□ 0.93
HLA-DQB1-204ENST00000399084 SPATA32Q96LK8 384 aa20.84■□□□□ 0.93
HLA-DQB1-204ENST00000399084 CNTNAP4Q9C0A0 1308 aa20.83■□□□□ 0.93
HLA-DQB1-204ENST00000399084 SALL1Q9NSC2 1324 aa20.83■□□□□ 0.93
HLA-DQB1-204ENST00000399084 GNAT2P19087 354 aa20.83■□□□□ 0.92
HLA-DQB1-204ENST00000399084 APOBRQ0VD83 1088 aa20.83■□□□□ 0.92
HLA-DQB1-204ENST00000399084 RESTQ13127 1097 aa20.83■□□□□ 0.92
HLA-DQB1-204ENST00000399084 SLFNL1Q499Z3 407 aa20.83■□□□□ 0.92
HLA-DQB1-204ENST00000399084 RTN4Q9NQC3 1192 aaKnown RBP20.83■□□□□ 0.92
HLA-DQB1-204ENST00000399084 NUTM2BA6NNL0 878 aaPredicted RBP20.82■□□□□ 0.92
HLA-DQB1-204ENST00000399084 NUTM2EB1AL46 878 aaPredicted RBP20.82■□□□□ 0.92
HLA-DQB1-204ENST00000399084 PDE6AP16499 860 aa20.82■□□□□ 0.92
HLA-DQB1-204ENST00000399084 PHKA1P46020 1223 aa20.82■□□□□ 0.92
HLA-DQB1-204ENST00000399084 SF3B3Q15393 1217 aaKnown RBP20.82■□□□□ 0.92
HLA-DQB1-204ENST00000399084 TTC6Q86TZ1 520 aa20.82■□□□□ 0.92
HLA-DQB1-204ENST00000399084 NUTM2AQ8IVF1 878 aaPredicted RBP20.82■□□□□ 0.92
HLA-DQB1-204ENST00000399084 DDX19AQ9NUU7 478 aaKnown RBP20.82■□□□□ 0.92
HLA-DQB1-204ENST00000399084 COL5A3P25940 1745 aaPredicted RBP20.82■□□□□ 0.92
HLA-DQB1-204ENST00000399084 JAK2O60674 1132 aa20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 HCLS1P14317 486 aaPredicted RBP20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 TTLL5Q6EMB2 1281 aa20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 TCRBV5S4A2TA0A5A2 114 aa20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 PTPDC1A2A3K4 754 aa20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 PRC1O43663 620 aa20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 IDH1O75874 414 aaKnown RBP20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 SLC10A5Q5PT55 438 aa20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 ZSCAN30Q86W11 494 aa20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 LEO1Q8WVC0 666 aaPredicted RBP20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 ZNF396Q96N95 335 aaPredicted RBP20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 MTA3Q9BTC8 594 aa20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 PIH1D3Q9NQM4 214 aaKnown RBP20.81■□□□□ 0.92
HLA-DQB1-204ENST00000399084 ZNF532Q9HCE3 1301 aa20.8■□□□□ 0.92
HLA-DQB1-204ENST00000399084 TMED8Q6PL24 325 aaPredicted RBP20.8■□□□□ 0.92
HLA-DQB1-204ENST00000399084 FERMT3Q86UX7 667 aa20.8■□□□□ 0.92
HLA-DQB1-204ENST00000399084 TMEM87BQ96K49 555 aa20.8■□□□□ 0.92
HLA-DQB1-204ENST00000399084 RRAGDQ9NQL2 400 aaPredicted RBP20.8■□□□□ 0.92
HLA-DQB1-204ENST00000399084 BCORQ6W2J9 1755 aa20.8■□□□□ 0.92
HLA-DQB1-204ENST00000399084 MYH14Q7Z406 1995 aaKnown RBP20.79■□□□□ 0.92
HLA-DQB1-204ENST00000399084 CARMIL3Q8ND23 1372 aa20.79■□□□□ 0.92
HLA-DQB1-204ENST00000399084 DDX60Q8IY21 1712 aaKnown RBP20.79■□□□□ 0.92
HLA-DQB1-204ENST00000399084 PATL2C9JE40 543 aaKnown RBP20.79■□□□□ 0.92
HLA-DQB1-204ENST00000399084 CTDNEP1O95476 244 aa20.79■□□□□ 0.92
HLA-DQB1-204ENST00000399084 HSPA1LP34931 641 aa20.79■□□□□ 0.92
HLA-DQB1-204ENST00000399084 PI16Q6UXB8 463 aa20.79■□□□□ 0.92
HLA-DQB1-204ENST00000399084 AIDAQ96BJ3 306 aa20.79■□□□□ 0.92
HLA-DQB1-204ENST00000399084 STRBPQ96SI9 672 aaKnown RBP20.79■□□□□ 0.92
HLA-DQB1-204ENST00000399084 LRRC2Q9BYS8 371 aa20.79■□□□□ 0.92
HLA-DQB1-204ENST00000399084 GNL3LQ9NVN8 582 aaKnown RBP20.79■□□□□ 0.92
HLA-DQB1-204ENST00000399084 ZBTB22O15209 634 aa20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 FNBP4Q8N3X1 1017 aaPredicted RBP20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 NYXQ9GZU5 481 aa20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 CNNM2Q9H8M5 875 aa20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 IGSF3O75054 1194 aa20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 CAVIN2O95810 425 aa20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 CCDC192P0DO97 292 aa20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 UBE4AQ14139 1066 aa20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 FUCA2Q9BTY2 467 aa20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 CCDC39Q9UFE4 941 aa20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 RCOR1Q9UKL0 485 aa20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 PNPLA7Q6ZV29 1317 aa20.78■□□□□ 0.92
HLA-DQB1-204ENST00000399084 A0A0G2JS52 829 aa20.77■□□□□ 0.92
HLA-DQB1-204ENST00000399084 CDKL5O76039 1030 aa20.77■□□□□ 0.92
HLA-DQB1-204ENST00000399084 DDX11Q96FC9 970 aa20.77■□□□□ 0.92
HLA-DQB1-204ENST00000399084 NACAP1Q9BZK3 213 aa20.77■□□□□ 0.92
HLA-DQB1-204ENST00000399084 NUP62CLQ9H1M0 184 aa20.77■□□□□ 0.92
HLA-DQB1-204ENST00000399084 DOCK2Q92608 1830 aa20.77■□□□□ 0.92
HLA-DQB1-204ENST00000399084 RASGRF1Q13972 1273 aa20.76■□□□□ 0.91
HLA-DQB1-204ENST00000399084 CPLX2Q6PUV4 134 aaKnown RBP20.76■□□□□ 0.91
HLA-DQB1-204ENST00000399084 BSDC1Q9NW68 430 aaPredicted RBP20.76■□□□□ 0.91
HLA-DQB1-204ENST00000399084 ANGEL1Q9UNK9 670 aaKnown RBP20.76■□□□□ 0.91
HLA-DQB1-204ENST00000399084 BCL9LQ86UU0 1499 aa20.76■□□□□ 0.91
HLA-DQB1-204ENST00000399084 MAP3K11Q16584 847 aa20.75■□□□□ 0.91
HLA-DQB1-204ENST00000399084 ANKRD18AQ8IVF6 992 aa20.75■□□□□ 0.91
HLA-DQB1-204ENST00000399084 NGLY1Q96IV0 654 aa20.75■□□□□ 0.91
HLA-DQB1-204ENST00000399084 SEC31BQ9NQW1 1179 aa20.75■□□□□ 0.91
HLA-DQB1-204ENST00000399084 APPP05067 770 aa20.75■□□□□ 0.91
HLA-DQB1-204ENST00000399084 HAND2P61296 217 aa20.75■□□□□ 0.91
HLA-DQB1-204ENST00000399084 CCT2P78371 535 aaKnown RBP20.75■□□□□ 0.91
HLA-DQB1-204ENST00000399084 CHRNDQ07001 517 aa20.75■□□□□ 0.91
HLA-DQB1-204ENST00000399084 RBM43Q6ZSC3 357 aaKnown RBP20.75■□□□□ 0.91
HLA-DQB1-204ENST00000399084 HELBQ8NG08 1087 aaPredicted RBP20.75■□□□□ 0.91
HLA-DQB1-204ENST00000399084 NOL7Q9UMY1 257 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms