RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 NCOA5Q9HCD5 579 aaKnown RBP10.4□□□□□ -0.74
GIN1-201ENST00000399004 FPGT-TNNI3KV9GXZ4 949 aa10.4□□□□□ -0.74
GIN1-201ENST00000399004 TATP17735 454 aaPredicted RBP10.39□□□□□ -0.75
GIN1-201ENST00000399004 ZSCAN25Q6NSZ9 544 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 ZNF496Q96IT1 587 aaPredicted RBP10.39□□□□□ -0.75
GIN1-201ENST00000399004 SEC62Q99442 399 aaKnown RBP10.39□□□□□ -0.75
GIN1-201ENST00000399004 LLPHQ9BRT6 129 aaKnown RBP10.39□□□□□ -0.75
GIN1-201ENST00000399004 ISCA1Q9BUE6 129 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 SKILP12757 684 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 BRF1Q92994 677 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 SDF4Q9BRK5 362 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 ZSWIM4Q9H7M6 989 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 DBNLQ9UJU6 430 aaKnown RBP10.39□□□□□ -0.75
GIN1-201ENST00000399004 CDHR2Q9BYE9 1310 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 A0A0D9SFI3 127 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 EXOSC10Q01780 885 aaKnown RBP10.39□□□□□ -0.75
GIN1-201ENST00000399004 PTPN14Q15678 1187 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 C11orf57Q6ZUT1 292 aaPredicted RBP10.39□□□□□ -0.75
GIN1-201ENST00000399004 CADPS2Q86UW7 1296 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 DSCC1Q9BVC3 393 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 HELLSQ9NRZ9 838 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 SBF2Q86WG5 1849 aa10.39□□□□□ -0.75
GIN1-201ENST00000399004 ZMYM6O95789 1325 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 NBPF26B4DH59 902 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 PSMA5P28066 241 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 HSP90AB3PQ58FF7 597 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 NBPF14Q5TI25 921 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 NBPF10Q6P3W6 841 aaKnown RBP10.38□□□□□ -0.75
GIN1-201ENST00000399004 NBPF15Q8N660 670 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 AOPEPQ8N6M6 819 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 EPC1Q9H2F5 836 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 SPTLC3Q9NUV7 552 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 GTF2F1P35269 517 aaKnown RBP eCLIP10.38□□□□□ -0.75
GIN1-201ENST00000399004 KRT32Q14532 448 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 ANKRD13DQ6ZTN6 518 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 CARD10Q9BWT7 1032 aa10.38□□□□□ -0.75
GIN1-201ENST00000399004 POLR3DP05423 398 aaPredicted RBP10.37□□□□□ -0.75
GIN1-201ENST00000399004 SF3A1Q15459 793 aaKnown RBP10.37□□□□□ -0.75
GIN1-201ENST00000399004 XAGE3Q8WTP9 111 aa10.37□□□□□ -0.75
GIN1-201ENST00000399004 CCDC85AQ96PX6 553 aaPredicted RBP10.37□□□□□ -0.75
GIN1-201ENST00000399004 LY75O60449 1722 aa10.37□□□□□ -0.75
GIN1-201ENST00000399004 DDX60LQ5H9U9 1706 aaKnown RBP10.37□□□□□ -0.75
GIN1-201ENST00000399004 CSF1RP07333 972 aa10.37□□□□□ -0.75
GIN1-201ENST00000399004 ZNF75DP51815 510 aa10.37□□□□□ -0.75
GIN1-201ENST00000399004 DDX46Q7L014 1031 aaKnown RBP10.37□□□□□ -0.75
GIN1-201ENST00000399004 ZNF589Q86UQ0 364 aaPredicted RBP10.37□□□□□ -0.75
GIN1-201ENST00000399004 G3BP1Q13283 466 aaKnown RBP eCLIP10.37□□□□□ -0.75
GIN1-201ENST00000399004 ERCC6LQ2NKX8 1250 aa10.37□□□□□ -0.75
GIN1-201ENST00000399004 TTLL5Q6EMB2 1281 aa10.37□□□□□ -0.75
GIN1-201ENST00000399004 NEUROD6Q96NK8 337 aa10.37□□□□□ -0.75
GIN1-201ENST00000399004 BCL9O00512 1426 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 CCDC69A6NI79 296 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
GIN1-201ENST00000399004 ATL3Q6DD88 541 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 SYT10Q6XYQ8 523 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 CREBRFQ8IUR6 639 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 LRRN4CLQ8ND94 238 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 LEO1Q8WVC0 666 aaPredicted RBP10.36□□□□□ -0.75
GIN1-201ENST00000399004 ZMYM1Q5SVZ6 1142 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 CERS3Q8IU89 383 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 NFATC2IPQ8NCF5 419 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 CCDC191Q8NCU4 936 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 KCND1Q9NSA2 647 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 GJB4Q9NTQ9 266 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 RTL9Q8NET4 1388 aa10.36□□□□□ -0.75
GIN1-201ENST00000399004 A0A1B0GVL5 298 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 FOXP2O15409 715 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 HAND2P61296 217 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 COPS6Q7L5N1 327 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 TMC6Q7Z403 805 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 PROSER2Q86WR7 435 aaPredicted RBP10.35□□□□□ -0.75
GIN1-201ENST00000399004 CCAR1Q8IX12 1150 aaKnown RBP10.35□□□□□ -0.75
GIN1-201ENST00000399004 KBTBD3Q8NAB2 608 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 CCDC34Q96HJ3 373 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 CACNA1SQ13698 1873 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 PFKFB2O60825 505 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 KINO60870 393 aaKnown RBP10.35□□□□□ -0.75
GIN1-201ENST00000399004 RESTQ13127 1097 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 CCDC73Q6ZRK6 1079 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 BRINP3Q76B58 766 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
GIN1-201ENST00000399004 TAF1LQ8IZX4 1826 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 TNRC6CQ9HCJ0 1690 aaKnown RBP10.35□□□□□ -0.75
GIN1-201ENST00000399004 SRCAPQ6ZRS2 3230 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 RAPGEF4Q8WZA2 1011 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 PGBD1Q96JS3 809 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 MORC2Q9Y6X9 1032 aaPredicted RBP10.35□□□□□ -0.75
GIN1-201ENST00000399004 MYH13Q9UKX3 1938 aa10.35□□□□□ -0.75
GIN1-201ENST00000399004 LMOD1P29536 600 aaPredicted RBP10.34□□□□□ -0.75
GIN1-201ENST00000399004 SLC39A6Q13433 755 aa10.34□□□□□ -0.75
GIN1-201ENST00000399004 KMT5BQ4FZB7 885 aa10.34□□□□□ -0.75
GIN1-201ENST00000399004 FBXO38Q6PIJ6 1188 aa10.34□□□□□ -0.75
GIN1-201ENST00000399004 Q6ZUG5 572 aa10.34□□□□□ -0.75
GIN1-201ENST00000399004 GTPBP4Q9BZE4 634 aaKnown RBP10.34□□□□□ -0.75
GIN1-201ENST00000399004 FOCADQ5VW36 1801 aa10.34□□□□□ -0.75
GIN1-201ENST00000399004 HMGB1P09429 215 aaKnown RBP10.34□□□□□ -0.75
GIN1-201ENST00000399004 GYS2P54840 703 aa10.34□□□□□ -0.75
GIN1-201ENST00000399004 APOBRQ0VD83 1088 aa10.34□□□□□ -0.75
GIN1-201ENST00000399004 NEXNQ0ZGT2 675 aa10.34□□□□□ -0.75
GIN1-201ENST00000399004 NAA16Q6N069 864 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms