RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 PDCL2Q8N4E4 241 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 CTCFLQ8NI51 663 aaPredicted RBP10.49□□□□□ -0.73
SEC24A-202ENST00000398844 KIF2CQ99661 725 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 DBNLQ9UJU6 430 aaKnown RBP10.49□□□□□ -0.73
SEC24A-202ENST00000398844 VWDEQ8N2E2 1590 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 CRB1P82279 1406 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 PRDM1O75626 825 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 LIG1P18858 919 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 CASQ1P31415 396 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 DHX58Q96C10 678 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 FTOQ9C0B1 505 aaKnown RBP eCLIP10.49□□□□□ -0.73
SEC24A-202ENST00000398844 PTPRUQ92729 1446 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 ZNF532Q9HCE3 1301 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 DIP2AQ14689 1571 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 HOXB7P09629 217 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 FAM98CQ17RN3 349 aaKnown RBP10.49□□□□□ -0.73
SEC24A-202ENST00000398844 UVSSAQ2YD98 709 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 CEP135Q66GS9 1140 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 MRPS27Q92552 414 aaKnown RBP10.49□□□□□ -0.73
SEC24A-202ENST00000398844 SETDB2Q96T68 719 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 KAT14Q9H8E8 782 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 PTPN21Q16825 1174 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 HEATR3Q7Z4Q2 680 aa10.49□□□□□ -0.73
SEC24A-202ENST00000398844 NR1I2O75469 434 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 SFPQP23246 707 aaKnown RBP eCLIP10.48□□□□□ -0.73
SEC24A-202ENST00000398844 TNNT3P45378 269 aaPredicted RBP10.48□□□□□ -0.73
SEC24A-202ENST00000398844 CCDC96Q2M329 555 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 SEC63Q9UGP8 760 aaKnown RBP10.48□□□□□ -0.73
SEC24A-202ENST00000398844 ZKSCAN5Q9Y2L8 839 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 SASH1O94885 1247 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 LMOD1P29536 600 aaPredicted RBP10.48□□□□□ -0.73
SEC24A-202ENST00000398844 NAA16Q6N069 864 aaPredicted RBP10.48□□□□□ -0.73
SEC24A-202ENST00000398844 SPTLC2O15270 562 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 DNA2P51530 1060 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 STX17P56962 302 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 SCRN1Q12765 414 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 FAM182BQ5T319 152 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 GREM2Q9H772 168 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 ARGLU1Q9NWB6 273 aaPredicted RBP10.48□□□□□ -0.73
SEC24A-202ENST00000398844 SLAIN2Q9P270 581 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 RGS12O14924 1447 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 MCM7P33993 719 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 SYNE4Q8N205 404 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 CCDC191Q8NCU4 936 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 FAM200AQ8TCP9 573 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 LEO1Q8WVC0 666 aaPredicted RBP10.48□□□□□ -0.73
SEC24A-202ENST00000398844 CCDC43Q96MW1 224 aaKnown RBP10.48□□□□□ -0.73
SEC24A-202ENST00000398844 KCNJ14Q9UNX9 436 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 CTAGE5O15320 804 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 ZSWIM4Q9H7M6 989 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 CBX8Q9HC52 389 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 CABP5Q9NP86 173 aa10.48□□□□□ -0.73
SEC24A-202ENST00000398844 COL3A1P02461 1466 aaPredicted RBP10.48□□□□□ -0.73
SEC24A-202ENST00000398844 URI1O94763 535 aaPredicted RBP10.47□□□□□ -0.73
SEC24A-202ENST00000398844 KBTBD3Q8NAB2 608 aa10.47□□□□□ -0.73
SEC24A-202ENST00000398844 TSC1Q92574 1164 aa10.47□□□□□ -0.73
SEC24A-202ENST00000398844 ZSWIM6Q9HCJ5 1215 aa10.47□□□□□ -0.73
SEC24A-202ENST00000398844 ADCY9O60503 1353 aa10.47□□□□□ -0.73
SEC24A-202ENST00000398844 TSPY3P0CV98 308 aa10.47□□□□□ -0.73
SEC24A-202ENST00000398844 TSPY8P0CW00 308 aa10.47□□□□□ -0.73
SEC24A-202ENST00000398844 NUP88Q99567 741 aaPredicted RBP10.47□□□□□ -0.73
SEC24A-202ENST00000398844 KRT23Q9C075 422 aa10.47□□□□□ -0.73
SEC24A-202ENST00000398844 ZFYP08048 801 aaPredicted RBP10.47□□□□□ -0.73
SEC24A-202ENST00000398844 RNF41Q9H4P4 317 aaPredicted RBP10.47□□□□□ -0.73
SEC24A-202ENST00000398844 AATFQ9NY61 560 aaKnown RBP eCLIP10.47□□□□□ -0.73
SEC24A-202ENST00000398844 GNPATO15228 680 aa10.47□□□□□ -0.73
SEC24A-202ENST00000398844 ZNF445P59923 1031 aa10.47□□□□□ -0.73
SEC24A-202ENST00000398844 DEF6Q9H4E7 631 aa10.47□□□□□ -0.73
SEC24A-202ENST00000398844 ZNF174Q15697 407 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 IFNKQ9P0W0 207 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 STAP2Q9UGK3 403 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 STX8Q9UNK0 236 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 AK9Q5TCS8 1911 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 ATP5JP18859 108 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 BCAMP50895 628 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 CTSWP56202 376 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 UBASH3AP57075 661 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 GPIHBP1Q8IV16 184 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 LMTK3Q96Q04 1460 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 POLA2Q14181 598 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 SPATA5Q8NB90 893 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 MTMR6Q9Y217 621 aa10.46□□□□□ -0.73
SEC24A-202ENST00000398844 CCDC70Q6NSX1 233 aa10.46□□□□□ -0.74
SEC24A-202ENST00000398844 COBLO75128 1261 aa10.46□□□□□ -0.74
SEC24A-202ENST00000398844 CRACR2BQ8N4Y2 399 aaPredicted RBP10.46□□□□□ -0.74
SEC24A-202ENST00000398844 ZNF622Q969S3 477 aaKnown RBP eCLIP10.46□□□□□ -0.742e-6■■□□□ 11.4
SEC24A-202ENST00000398844 HAUS7Q99871 368 aa10.46□□□□□ -0.74
SEC24A-202ENST00000398844 HSPD1P10809 573 aaKnown RBP10.45□□□□□ -0.74
SEC24A-202ENST00000398844 SKILP12757 684 aa10.45□□□□□ -0.74
SEC24A-202ENST00000398844 EIF5P55010 431 aaKnown RBP10.45□□□□□ -0.74
SEC24A-202ENST00000398844 EIF6P56537 245 aaKnown RBP10.45□□□□□ -0.74
SEC24A-202ENST00000398844 IL25Q9H293 177 aa10.45□□□□□ -0.74
SEC24A-202ENST00000398844 CCDC196A0A1B0GTZ2 297 aa10.45□□□□□ -0.74
SEC24A-202ENST00000398844 PDE8AO60658 829 aa10.45□□□□□ -0.74
SEC24A-202ENST00000398844 PUM3Q15397 648 aaKnown RBP10.45□□□□□ -0.74
SEC24A-202ENST00000398844 SDR42E1Q8WUS8 393 aa10.45□□□□□ -0.74
SEC24A-202ENST00000398844 GTF3C6Q969F1 213 aa10.45□□□□□ -0.74
SEC24A-202ENST00000398844 CRNKL1Q9BZJ0 848 aaKnown RBP10.45□□□□□ -0.74
SEC24A-202ENST00000398844 CCP110O43303 1012 aa10.45□□□□□ -0.74
SEC24A-202ENST00000398844 SNW1Q13573 536 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms