RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 WWC3Q9ULE0 1092 aa27.72■■■□□ 2.03
CDH23-206ENST00000398842 FOXP2O15409 715 aa27.71■■■□□ 2.03
CDH23-206ENST00000398842 CAVIN4Q5BKX8 364 aa27.71■■■□□ 2.03
CDH23-206ENST00000398842 NOL8Q76FK4 1167 aaKnown RBP27.71■■■□□ 2.03
CDH23-206ENST00000398842 FAM84BQ96KN1 310 aaPredicted RBP27.71■■■□□ 2.03
CDH23-206ENST00000398842 CWC22Q9HCG8 908 aaKnown RBP27.71■■■□□ 2.03
CDH23-206ENST00000398842 PDRG1Q9NUG6 133 aa27.71■■■□□ 2.03
CDH23-206ENST00000398842 GNL3LQ9NVN8 582 aaKnown RBP27.71■■■□□ 2.03
CDH23-206ENST00000398842 FBXO33Q7Z6M2 555 aa27.71■■■□□ 2.03
CDH23-206ENST00000398842 RPGRQ92834 1020 aaKnown RBP27.71■■■□□ 2.03
CDH23-206ENST00000398842 ANO8Q9HCE9 1232 aaPredicted RBP27.71■■■□□ 2.03
CDH23-206ENST00000398842 ANKRD31Q8N7Z5 1873 aa27.7■■■□□ 2.03
CDH23-206ENST00000398842 PNPLA7Q6ZV29 1317 aa27.7■■■□□ 2.03
CDH23-206ENST00000398842 ZNF532Q9HCE3 1301 aa27.7■■■□□ 2.03
CDH23-206ENST00000398842 KLRG2A4D1S0 409 aaPredicted RBP27.7■■■□□ 2.02
CDH23-206ENST00000398842 ZGPATQ8N5A5 531 aaKnown RBP27.7■■■□□ 2.02
CDH23-206ENST00000398842 COL1A1P02452 1464 aaPredicted RBP27.69■■■□□ 2.02
CDH23-206ENST00000398842 GPAA1O43292 621 aa27.69■■■□□ 2.02
CDH23-206ENST00000398842 MAP3K12Q12852 859 aa27.69■■■□□ 2.02
CDH23-206ENST00000398842 COL9A3Q14050 684 aaPredicted RBP27.69■■■□□ 2.02
CDH23-206ENST00000398842 FRAT2O75474 233 aaPredicted RBP27.68■■■□□ 2.02
CDH23-206ENST00000398842 BLOC1S2Q6QNY1 142 aa27.68■■■□□ 2.02
CDH23-206ENST00000398842 INTS4Q96HW7 963 aaKnown RBP27.68■■■□□ 2.02
CDH23-206ENST00000398842 LIMCH1Q9UPQ0 1083 aa27.68■■■□□ 2.02
CDH23-206ENST00000398842 IRS2Q9Y4H2 1338 aa27.68■■■□□ 2.02
CDH23-206ENST00000398842 LAMA4Q16363 1823 aa27.68■■■□□ 2.02
CDH23-206ENST00000398842 RPS6KB1P23443 525 aa27.68■■■□□ 2.02
CDH23-206ENST00000398842 KLRK1P26718 216 aa27.68■■■□□ 2.02
CDH23-206ENST00000398842 HOXA10P31260 410 aaPredicted RBP27.68■■■□□ 2.02
CDH23-206ENST00000398842 RAB3GAP1Q15042 981 aa27.68■■■□□ 2.02
CDH23-206ENST00000398842 UPF1Q92900 1129 aaKnown RBP eCLIP27.68■■■□□ 2.02
CDH23-206ENST00000398842 ALDH8A1Q9H2A2 487 aaPredicted RBP27.68■■■□□ 2.02
CDH23-206ENST00000398842 MYH13Q9UKX3 1938 aa27.68■■■□□ 2.02
CDH23-206ENST00000398842 RBM17Q96I25 401 aaKnown RBP27.67■■■□□ 2.02
CDH23-206ENST00000398842 IQSEC3Q9UPP2 1182 aaPredicted RBP27.67■■■□□ 2.02
CDH23-206ENST00000398842 SEMA3EO15041 775 aa27.65■■■□□ 2.02
CDH23-206ENST00000398842 ZBTB22O15209 634 aa27.65■■■□□ 2.02
CDH23-206ENST00000398842 VPS37DQ86XT2 251 aa27.65■■■□□ 2.02
CDH23-206ENST00000398842 MAGEB6Q8N7X4 407 aa27.65■■■□□ 2.02
CDH23-206ENST00000398842 NEK1Q96PY6 1258 aa27.65■■■□□ 2.02
CDH23-206ENST00000398842 DENND2AQ9ULE3 1009 aa27.65■■■□□ 2.02
CDH23-206ENST00000398842 SLC15A2Q16348 729 aa27.65■■■□□ 2.02
CDH23-206ENST00000398842 STOX1Q6ZVD7 989 aa27.65■■■□□ 2.02
CDH23-206ENST00000398842 SLC51AQ86UW1 340 aa27.65■■■□□ 2.02
CDH23-206ENST00000398842 STK32BQ9NY57 414 aa27.65■■■□□ 2.02
CDH23-206ENST00000398842 LEMD3Q9Y2U8 911 aa27.65■■■□□ 2.02
CDH23-206ENST00000398842 CRAMP1Q96RY5 1269 aa27.64■■■□□ 2.02
CDH23-206ENST00000398842 CTNNA3Q9UI47 895 aa27.64■■■□□ 2.02
CDH23-206ENST00000398842 PDS5AQ29RF7 1337 aaKnown RBP27.63■■■□□ 2.01
CDH23-206ENST00000398842 A0A0G2JLW4 131 aa27.63■■■□□ 2.01
CDH23-206ENST00000398842 HIBADHP31937 336 aaKnown RBP27.63■■■□□ 2.01
CDH23-206ENST00000398842 QSER1Q2KHR3 1735 aa27.63■■■□□ 2.01
CDH23-206ENST00000398842 XDHP47989 1333 aa27.63■■■□□ 2.01
CDH23-206ENST00000398842 FGAP02671 866 aa27.63■■■□□ 2.01
CDH23-206ENST00000398842 TTLL5Q6EMB2 1281 aa27.63■■■□□ 2.01
CDH23-206ENST00000398842 ILDR2Q71H61 639 aa27.63■■■□□ 2.01
CDH23-206ENST00000398842 LARP6Q9BRS8 491 aaKnown RBP27.63■■■□□ 2.01
CDH23-206ENST00000398842 BRIP1Q9BX63 1249 aa27.63■■■□□ 2.01
CDH23-206ENST00000398842 BBOX1O75936 387 aa27.62■■■□□ 2.01
CDH23-206ENST00000398842 ZSCAN31Q96LW9 406 aaPredicted RBP27.62■■■□□ 2.01
CDH23-206ENST00000398842 ANKIB1Q9P2G1 1089 aa27.62■■■□□ 2.01
CDH23-206ENST00000398842 LRP2BPQ9P2M1 347 aa27.62■■■□□ 2.01
CDH23-206ENST00000398842 TXNRD3Q86VQ6 643 aa27.61■■■□□ 2.01
CDH23-206ENST00000398842 STRBPQ96SI9 672 aaKnown RBP27.61■■■□□ 2.01
CDH23-206ENST00000398842 LRRC37AA6NMS7 1700 aa27.61■■■□□ 2.01
CDH23-206ENST00000398842 MMP10P09238 476 aa27.6■■■□□ 2.01
CDH23-206ENST00000398842 NUCB2P80303 420 aa27.6■■■□□ 2.01
CDH23-206ENST00000398842 TNPO1Q92973 898 aaKnown RBP27.6■■■□□ 2.01
CDH23-206ENST00000398842 CACNA1SQ13698 1873 aa27.6■■■□□ 2.01
CDH23-206ENST00000398842 LARGE1O95461 756 aa27.6■■■□□ 2.01
CDH23-206ENST00000398842 TOB2Q14106 344 aaPredicted RBP27.6■■■□□ 2.01
CDH23-206ENST00000398842 ANKRD1Q15327 319 aa27.6■■■□□ 2.01
CDH23-206ENST00000398842 AIDAQ96BJ3 306 aa27.6■■■□□ 2.01
CDH23-206ENST00000398842 TCEANC2Q96MN5 208 aa27.6■■■□□ 2.01
CDH23-206ENST00000398842 SH2B1Q9NRF2 756 aaPredicted RBP27.6■■■□□ 2.01
CDH23-206ENST00000398842 E7EWF7 191 aa27.59■■■□□ 2.01
CDH23-206ENST00000398842 HMGB1P09429 215 aaKnown RBP27.59■■■□□ 2.01
CDH23-206ENST00000398842 GPSM2P81274 684 aa27.59■■■□□ 2.01
CDH23-206ENST00000398842 C15orf52Q6ZUT6 534 aaKnown RBP27.59■■■□□ 2.01
CDH23-206ENST00000398842 IMMTQ16891 758 aaKnown RBP27.58■■■□□ 2.01
CDH23-206ENST00000398842 ABCF2Q9UG63 623 aa27.58■■■□□ 2.01
CDH23-206ENST00000398842 PARP3Q9Y6F1 533 aa27.58■■■□□ 2.01
CDH23-206ENST00000398842 TPCN1Q9ULQ1 816 aa27.58■■■□□ 2
CDH23-206ENST00000398842 LTBP1Q14766 1721 aa27.57■■■□□ 2
CDH23-206ENST00000398842 MBD4O95243 580 aa27.56■■■□□ 2
CDH23-206ENST00000398842 ALX1Q15699 326 aa27.56■■■□□ 2
CDH23-206ENST00000398842 ME3Q16798 604 aa27.56■■■□□ 2
CDH23-206ENST00000398842 DHX32Q7L7V1 743 aaKnown RBP27.56■■■□□ 2
CDH23-206ENST00000398842 COL11A2P13942 1736 aaPredicted RBP27.56■■■□□ 2
CDH23-206ENST00000398842 MCM4P33991 863 aa27.55■■■□□ 2
CDH23-206ENST00000398842 PKP1Q13835 747 aa27.55■■■□□ 2
CDH23-206ENST00000398842 MSL1Q68DK7 614 aa27.55■■■□□ 2
CDH23-206ENST00000398842 TMC4Q7Z404 712 aa27.55■■■□□ 2
CDH23-206ENST00000398842 PODXL2Q9NZ53 605 aa27.55■■■□□ 2
CDH23-206ENST00000398842 RAI14Q9P0K7 980 aa27.55■■■□□ 2
CDH23-206ENST00000398842 ZMYM6O95789 1325 aa27.55■■■□□ 2
CDH23-206ENST00000398842 SRGNP10124 158 aa27.55■■■□□ 2
CDH23-206ENST00000398842 ATP2B4P23634 1241 aa27.55■■■□□ 2
CDH23-206ENST00000398842 EXOSC10Q01780 885 aaKnown RBP27.55■■■□□ 2
CDH23-206ENST00000398842 ARMT1Q9H993 441 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms