RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 FRMPD1Q5SYB0 1578 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 HECW2Q9P2P5 1572 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 CCT5P48643 541 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 STX1AQ16623 288 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 INTS4Q96HW7 963 aaKnown RBP10.63□□□□□ -0.71
CDH23-203ENST00000398788 BICC1Q9H694 974 aaKnown RBP10.63□□□□□ -0.71
CDH23-203ENST00000398788 SEPT11Q9NVA2 429 aaKnown RBP10.63□□□□□ -0.71
CDH23-203ENST00000398788 KIF4AO95239 1232 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 MAP3K12Q12852 859 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 KARSQ15046 597 aaKnown RBP10.63□□□□□ -0.71
CDH23-203ENST00000398788 AFAP1L1Q8TED9 768 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 BRF1Q92994 677 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 ORAI2Q96SN7 254 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 VAT1LQ9HCJ6 419 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 PLXNC1O60486 1568 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 MLH3Q9UHC1 1453 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 C6orf229H3BNL8 230 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 GSPT1P15170 499 aaKnown RBP10.63□□□□□ -0.71
CDH23-203ENST00000398788 SCP2P22307 547 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 DNA2P51530 1060 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 EIF4A2Q14240 407 aaKnown RBP10.63□□□□□ -0.71
CDH23-203ENST00000398788 DDB1Q16531 1140 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 ODF2LQ9ULJ1 636 aa10.63□□□□□ -0.71
CDH23-203ENST00000398788 CYP2E1P05181 493 aaPredicted RBP10.62□□□□□ -0.71
CDH23-203ENST00000398788 TOP1P11387 765 aaKnown RBP10.62□□□□□ -0.71
CDH23-203ENST00000398788 ZNF76P36508 570 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 MMP14P50281 582 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 NEDD9Q14511 834 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 HSP90AA4PQ58FG1 418 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 DZIP1Q86YF9 867 aaKnown RBP10.62□□□□□ -0.71
CDH23-203ENST00000398788 RNF217Q8TC41 542 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 ACSBG1Q96GR2 724 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 SPATS2LQ9NUQ6 558 aaKnown RBP10.62□□□□□ -0.71
CDH23-203ENST00000398788 ELP1O95163 1332 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 NCOA3Q9Y6Q9 1424 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 RPSAP08865 295 aaKnown RBP10.62□□□□□ -0.71
CDH23-203ENST00000398788 LMBR1LQ6UX01 489 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 DYDC1Q8WWB3 177 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDH23-203ENST00000398788 IFNKQ9P0W0 207 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 ORC3Q9UBD5 711 aaPredicted RBP10.62□□□□□ -0.71
CDH23-203ENST00000398788 MYO6Q9UM54 1294 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 ANKRD18BA2A2Z9 1011 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 ZEB2O60315 1214 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 CWF19L2Q2TBE0 894 aaKnown RBP10.62□□□□□ -0.71
CDH23-203ENST00000398788 CARD10Q9BWT7 1032 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 SNRPA1P09661 255 aaKnown RBP10.62□□□□□ -0.71
CDH23-203ENST00000398788 PDE1AP54750 535 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 CHMP4BP1P59074 171 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 MTHFSDQ2M296 383 aaKnown RBP10.62□□□□□ -0.71
CDH23-203ENST00000398788 FBXW10Q5XX13 1052 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 FHOD1Q9Y613 1164 aa10.62□□□□□ -0.71
CDH23-203ENST00000398788 WDHD1O75717 1129 aaPredicted RBP10.61□□□□□ -0.71
CDH23-203ENST00000398788 LONRF2Q1L5Z9 754 aa10.61□□□□□ -0.71
CDH23-203ENST00000398788 CCDC144BQ3MJ40 725 aa10.61□□□□□ -0.71
CDH23-203ENST00000398788 NAIF1Q69YI7 327 aaPredicted RBP10.61□□□□□ -0.71
CDH23-203ENST00000398788 FSIP1Q8NA03 581 aa10.61□□□□□ -0.71
CDH23-203ENST00000398788 GDAP1L1Q96MZ0 367 aa10.61□□□□□ -0.71
CDH23-203ENST00000398788 BMP2KQ9NSY1 1161 aaPredicted RBP10.61□□□□□ -0.71
CDH23-203ENST00000398788 PTPRCP08575 1304 aa10.61□□□□□ -0.71
CDH23-203ENST00000398788 KIAA1328Q86T90 577 aa10.61□□□□□ -0.71
CDH23-203ENST00000398788 POTEDQ86YR6 584 aa10.61□□□□□ -0.71
CDH23-203ENST00000398788 CTCFLQ8NI51 663 aaPredicted RBP10.61□□□□□ -0.71
CDH23-203ENST00000398788 SLC12A7Q9Y666 1083 aa10.61□□□□□ -0.71
CDH23-203ENST00000398788 GOLGA6L7A0A1B0GV03 622 aa10.61□□□□□ -0.71
CDH23-203ENST00000398788 CRACR2BQ8N4Y2 399 aaPredicted RBP10.61□□□□□ -0.71
CDH23-203ENST00000398788 HELBQ8NG08 1087 aaPredicted RBP10.61□□□□□ -0.71
CDH23-203ENST00000398788 TRIM6Q9C030 488 aaPredicted RBP10.61□□□□□ -0.71
CDH23-203ENST00000398788 YTHDC2Q9H6S0 1430 aaKnown RBP10.61□□□□□ -0.71
CDH23-203ENST00000398788 LMOD1P29536 600 aaPredicted RBP10.6□□□□□ -0.71
CDH23-203ENST00000398788 PPARDQ03181 441 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 CHST3Q7LGC8 479 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 IQCA1Q86XH1 822 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 EGFL6Q8IUX8 553 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 GPR161Q8N6U8 529 aaKnown RBP10.6□□□□□ -0.71
CDH23-203ENST00000398788 PAF1Q8N7H5 531 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 NFATC2IPQ8NCF5 419 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 EVI5LQ96CN4 794 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 GOLGA8AA7E2F4 631 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 KIF5CO60282 957 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 LTKP29376 864 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 ETF1P62495 437 aaKnown RBP10.6□□□□□ -0.71
CDH23-203ENST00000398788 FAM204AQ9H8W3 233 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 SH2B1Q9NRF2 756 aaPredicted RBP10.6□□□□□ -0.71
CDH23-203ENST00000398788 ZNF446Q9NWS9 450 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.6□□□□□ -0.71
CDH23-203ENST00000398788 ABCA6Q8N139 1617 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 EFCAB8A8MWE9 144 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 CPA1P15085 419 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 MICALCLQ6ZW33 695 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 CCDC114Q96M63 670 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 UBA5Q9GZZ9 404 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 CWC25Q9NXE8 425 aaPredicted RBP10.6□□□□□ -0.71
CDH23-203ENST00000398788 NDUFAB1O14561 156 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 PPP1R12AO14974 1030 aaPredicted RBP10.6□□□□□ -0.71
CDH23-203ENST00000398788 VAMP4O75379 141 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 IL2RBP14784 551 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 E2F5Q15329 346 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 CCDC181Q5TID7 509 aa10.6□□□□□ -0.71
CDH23-203ENST00000398788 ZNF444Q8N0Y2 327 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms