RNA–Protein interactions for RNA: ENST00000398676.3

CCAR1-202, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 3

Gene CCAR1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-202ENST00000398676 TCP11L2Q8N4U5 519 aa12.22□□□□□ -0.45
CCAR1-202ENST00000398676 PBXIP1Q96AQ6 731 aa12.22□□□□□ -0.45
CCAR1-202ENST00000398676 CNTNAP3BQ96NU0 1288 aa12.22□□□□□ -0.45
CCAR1-202ENST00000398676 CNTNAP3Q9BZ76 1288 aa12.22□□□□□ -0.45
CCAR1-202ENST00000398676 CRISPLD1Q9H336 500 aa12.22□□□□□ -0.45
CCAR1-202ENST00000398676 C1orf115Q9H7X2 142 aa12.22□□□□□ -0.45
CCAR1-202ENST00000398676 STRN4Q9NRL3 753 aa12.22□□□□□ -0.45
CCAR1-202ENST00000398676 THRAP3Q9Y2W1 955 aaKnown RBP12.22□□□□□ -0.45
CCAR1-202ENST00000398676 TNRC18O15417 2968 aaPredicted RBP12.22□□□□□ -0.45
CCAR1-202ENST00000398676 PDE4DIPQ5VU43 2346 aa12.22□□□□□ -0.45
CCAR1-202ENST00000398676 NRXN1Q9ULB1 1477 aa12.21□□□□□ -0.45
CCAR1-202ENST00000398676 BCL9O00512 1426 aa12.21□□□□□ -0.45
CCAR1-202ENST00000398676 GPR25O00155 361 aa12.21□□□□□ -0.45
CCAR1-202ENST00000398676 SRPK2P78362 688 aaKnown RBP12.21□□□□□ -0.45
CCAR1-202ENST00000398676 GAS2L2Q8NHY3 880 aa12.21□□□□□ -0.45
CCAR1-202ENST00000398676 SCG3Q8WXD2 468 aaKnown RBP12.21□□□□□ -0.45
CCAR1-202ENST00000398676 CRYBG1Q9Y4K1 1723 aa12.2□□□□□ -0.46
CCAR1-202ENST00000398676 TXLNAP40222 546 aa12.2□□□□□ -0.46
CCAR1-202ENST00000398676 RNFT1Q5M7Z0 435 aa12.2□□□□□ -0.46
CCAR1-202ENST00000398676 BICDL1Q6ZP65 573 aa12.2□□□□□ -0.46
CCAR1-202ENST00000398676 PTF1AQ7RTS3 328 aa12.2□□□□□ -0.46
CCAR1-202ENST00000398676 NMRK2Q9NPI5 230 aa12.2□□□□□ -0.46
CCAR1-202ENST00000398676 TIMELESSQ9UNS1 1208 aa12.2□□□□□ -0.46
CCAR1-202ENST00000398676 SSH2Q76I76 1423 aa12.2□□□□□ -0.46
CCAR1-202ENST00000398676 E9PCH4 1651 aa12.19□□□□□ -0.46
CCAR1-202ENST00000398676 KRT76Q01546 638 aa12.19□□□□□ -0.46
CCAR1-202ENST00000398676 ELOAQ14241 798 aaKnown RBP12.19□□□□□ -0.46
CCAR1-202ENST00000398676 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
CCAR1-202ENST00000398676 EML1O00423 815 aa12.18□□□□□ -0.46
CCAR1-202ENST00000398676 FOXN1O15353 648 aa12.18□□□□□ -0.46
CCAR1-202ENST00000398676 LGR5O75473 907 aa12.18□□□□□ -0.46
CCAR1-202ENST00000398676 ATG7O95352 703 aa12.18□□□□□ -0.46
CCAR1-202ENST00000398676 THBS1P07996 1170 aa12.18□□□□□ -0.46
CCAR1-202ENST00000398676 PHF24Q9UPV7 400 aa12.18□□□□□ -0.46
CCAR1-202ENST00000398676 GJA3Q9Y6H8 435 aa12.18□□□□□ -0.46
CCAR1-202ENST00000398676 CICQ96RK0 1608 aaPredicted RBP12.18□□□□□ -0.46
CCAR1-202ENST00000398676 A0A1W2PNR3 127 aa12.17□□□□□ -0.46
CCAR1-202ENST00000398676 C21orf2O43822 256 aa12.17□□□□□ -0.46
CCAR1-202ENST00000398676 CTCFP49711 727 aaPredicted RBP12.17□□□□□ -0.46
CCAR1-202ENST00000398676 FIGNL1Q6PIW4 674 aa12.17□□□□□ -0.46
CCAR1-202ENST00000398676 NLRP8Q86W28 1048 aa12.17□□□□□ -0.46
CCAR1-202ENST00000398676 C10orf71Q711Q0 1435 aa12.17□□□□□ -0.46
CCAR1-202ENST00000398676 TRPM3Q9HCF6 1732 aaPredicted RBP12.17□□□□□ -0.46
CCAR1-202ENST00000398676 CCDC85CA6NKD9 419 aa12.16□□□□□ -0.46
CCAR1-202ENST00000398676 GAS6Q14393 721 aa12.16□□□□□ -0.46
CCAR1-202ENST00000398676 ZNF326Q5BKZ1 582 aaKnown RBP12.16□□□□□ -0.46
CCAR1-202ENST00000398676 SH3PXD2AQ5TCZ1 1133 aa12.16□□□□□ -0.46
CCAR1-202ENST00000398676 STAG2Q8N3U4 1231 aa12.16□□□□□ -0.46
CCAR1-202ENST00000398676 ZIC5Q96T25 663 aa12.16□□□□□ -0.46
CCAR1-202ENST00000398676 CFHR5Q9BXR6 569 aa12.16□□□□□ -0.46
CCAR1-202ENST00000398676 HCN4Q9Y3Q4 1203 aa12.16□□□□□ -0.46
CCAR1-202ENST00000398676 ANKRD30AQ9BXX3 1397 aa12.16□□□□□ -0.46
CCAR1-202ENST00000398676 LRRC37A3O60309 1634 aa12.15□□□□□ -0.46
CCAR1-202ENST00000398676 IGFBP4P22692 258 aa12.15□□□□□ -0.46
CCAR1-202ENST00000398676 HIRAP54198 1017 aaPredicted RBP12.15□□□□□ -0.46
CCAR1-202ENST00000398676 ZSCAN1Q8NBB4 408 aa12.15□□□□□ -0.46
CCAR1-202ENST00000398676 NEUROD4Q9HD90 331 aa12.15□□□□□ -0.46
CCAR1-202ENST00000398676 ZMIZ1Q9ULJ6 1067 aa12.15□□□□□ -0.46
CCAR1-202ENST00000398676 CD2APQ9Y5K6 639 aa12.15□□□□□ -0.46
CCAR1-202ENST00000398676 KIAA0232Q92628 1395 aa12.15□□□□□ -0.46
CCAR1-202ENST00000398676 RGPD8O14715 1765 aaPredicted RBP12.15□□□□□ -0.46
CCAR1-202ENST00000398676 EVA1CP58658 441 aa12.14□□□□□ -0.47
CCAR1-202ENST00000398676 ZNF827Q17R98 1081 aa12.14□□□□□ -0.47
CCAR1-202ENST00000398676 C1orf53Q5VUE5 145 aa12.14□□□□□ -0.47
CCAR1-202ENST00000398676 SMC1BQ8NDV3 1235 aa12.14□□□□□ -0.47
CCAR1-202ENST00000398676 RHPN1Q8TCX5 695 aa12.14□□□□□ -0.47
CCAR1-202ENST00000398676 C2orf49Q9BVC5 232 aaPredicted RBP12.14□□□□□ -0.47
CCAR1-202ENST00000398676 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
CCAR1-202ENST00000398676 BRD4O60885 1362 aaPredicted RBP12.14□□□□□ -0.47
CCAR1-202ENST00000398676 PHRF1Q9P1Y6 1649 aaKnown RBP12.14□□□□□ -0.47
CCAR1-202ENST00000398676 ACIN1Q9UKV3 1341 aaKnown RBP12.13□□□□□ -0.47
CCAR1-202ENST00000398676 UBAP2LQ14157 1087 aaKnown RBP12.13□□□□□ -0.47
CCAR1-202ENST00000398676 SWI5Q1ZZU3 235 aa12.13□□□□□ -0.47
CCAR1-202ENST00000398676 STK32AQ8WU08 396 aa12.13□□□□□ -0.47
CCAR1-202ENST00000398676 ZCCHC2Q9C0B9 1178 aaKnown RBP12.13□□□□□ -0.47
CCAR1-202ENST00000398676 PHACTR1Q9C0D0 580 aa12.13□□□□□ -0.47
CCAR1-202ENST00000398676 GPC6Q9Y625 555 aaPredicted RBP12.13□□□□□ -0.47
CCAR1-202ENST00000398676 CLTCL1P53675 1640 aa12.12□□□□□ -0.47
CCAR1-202ENST00000398676 MX2P20592 715 aa12.12□□□□□ -0.47
CCAR1-202ENST00000398676 SRSF11Q05519 484 aaKnown RBP12.12□□□□□ -0.47
CCAR1-202ENST00000398676 ATXN7L1Q9ULK2 861 aaPredicted RBP12.12□□□□□ -0.47
CCAR1-202ENST00000398676 NSFL1CQ9UNZ2 370 aaKnown RBP12.12□□□□□ -0.47
CCAR1-202ENST00000398676 PCDHGC4Q9Y5F7 938 aa12.12□□□□□ -0.47
CCAR1-202ENST00000398676 PXDNLA1KZ92 1463 aa12.12□□□□□ -0.47
CCAR1-202ENST00000398676 AKAP12Q02952 1782 aa12.12□□□□□ -0.47
CCAR1-202ENST00000398676 ATXN7O15265 892 aaPredicted RBP12.11□□□□□ -0.47
CCAR1-202ENST00000398676 CHRNA2Q15822 529 aa12.11□□□□□ -0.47
CCAR1-202ENST00000398676 BNIP3LO60238 219 aa12.1□□□□□ -0.47
CCAR1-202ENST00000398676 WEE1P30291 646 aa12.1□□□□□ -0.47
CCAR1-202ENST00000398676 DDB1Q16531 1140 aa12.1□□□□□ -0.47
CCAR1-202ENST00000398676 ALDH16A1Q8IZ83 802 aa12.1□□□□□ -0.47
CCAR1-202ENST00000398676 VTI1AQ96AJ9 217 aa12.1□□□□□ -0.47
CCAR1-202ENST00000398676 ABHD17AQ96GS6 310 aa12.1□□□□□ -0.47
CCAR1-202ENST00000398676 IFT172Q9UG01 1749 aa12.1□□□□□ -0.47
CCAR1-202ENST00000398676 PNPLA7Q6ZV29 1317 aa12.1□□□□□ -0.47
CCAR1-202ENST00000398676 TMEM164Q5U3C3 297 aa12.09□□□□□ -0.47
CCAR1-202ENST00000398676 LRRC69Q6ZNQ3 347 aa12.09□□□□□ -0.47
CCAR1-202ENST00000398676 DAPK1P53355 1430 aa12.09□□□□□ -0.47
CCAR1-202ENST00000398676 SLURP2P0DP57 97 aa12.08□□□□□ -0.48
CCAR1-202ENST00000398676 NDFIP2Q9NV92 336 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms