RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 CAVIN4Q5BKX8 364 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 GIMAP6Q6P9H5 292 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 KRT27Q7Z3Y8 459 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 SYNE4Q8N205 404 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 OSBP2Q969R2 916 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 UPF3BQ9BZI7 483 aaKnown RBP8.75□□□□□ -1.01
RGPD1-201ENST00000398193 LETM1O95202 739 aaPredicted RBP8.75□□□□□ -1.01
RGPD1-201ENST00000398193 CYP21A2P08686 494 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 RFC4P35249 363 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 NBPF5PQ86XG9 351 aaPredicted RBP8.75□□□□□ -1.01
RGPD1-201ENST00000398193 CNNM2Q9H8M5 875 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 LEMD3Q9Y2U8 911 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 MYH13Q9UKX3 1938 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 E7EWF7 191 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 STX6O43752 255 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 ARHGEF1Q92888 912 aaKnown RBP8.75□□□□□ -1.01
RGPD1-201ENST00000398193 SYAP1Q96A49 352 aaPredicted RBP8.75□□□□□ -1.01
RGPD1-201ENST00000398193 LMBRD1Q9NUN5 540 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 PATL2C9JE40 543 aaKnown RBP8.74□□□□□ -1.01
RGPD1-201ENST00000398193 SMARCC2Q8TAQ2 1214 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 EDC3Q96F86 508 aaKnown RBP8.74□□□□□ -1.01
RGPD1-201ENST00000398193 PIH1D3Q9NQM4 214 aaKnown RBP8.74□□□□□ -1.01
RGPD1-201ENST00000398193 RBM6P78332 1123 aaKnown RBP8.74□□□□□ -1.01
RGPD1-201ENST00000398193 ME3Q16798 604 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 FBXO33Q7Z6M2 555 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 NCOA7Q8NI08 942 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 TPCN1Q9ULQ1 816 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 DHX16O60231 1041 aaKnown RBP8.74□□□□□ -1.01
RGPD1-201ENST00000398193 F13A1P00488 732 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 PDE6AP16499 860 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 ST5P78524 1137 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 LTBP1Q14766 1721 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 IRS2Q9Y4H2 1338 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 A0A0G2JS52 829 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 GPAA1O43292 621 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 GJB2P29033 226 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 PHKA1P46020 1223 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 ANAPC4Q9UJX5 808 aa8.74□□□□□ -1.01
RGPD1-201ENST00000398193 GRAPQ13588 217 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 WASHC4Q2M389 1173 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 SPTY2D1Q68D10 685 aaPredicted RBP8.73□□□□□ -1.01
RGPD1-201ENST00000398193 GRAPLQ8TC17 118 aaPredicted RBP8.73□□□□□ -1.01
RGPD1-201ENST00000398193 TMEM87BQ96K49 555 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 NACAP1Q9BZK3 213 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 PLSCR1O15162 318 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 PHF14O94880 888 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 NCLP19338 710 aaKnown RBP8.73□□□□□ -1.01
RGPD1-201ENST00000398193 MCM5P33992 734 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 ZNF445P59923 1031 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 NAA16Q6N069 864 aaPredicted RBP8.73□□□□□ -1.01
RGPD1-201ENST00000398193 MB21D2Q8IYB1 491 aaPredicted RBP8.73□□□□□ -1.01
RGPD1-201ENST00000398193 RBM17Q96I25 401 aaKnown RBP8.73□□□□□ -1.01
RGPD1-201ENST00000398193 SEC31BQ9NQW1 1179 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 FOXD4L1Q9NU39 408 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 MINPP1Q9UNW1 487 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 MYH15Q9Y2K3 1946 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 KLRG2A4D1S0 409 aaPredicted RBP8.73□□□□□ -1.01
RGPD1-201ENST00000398193 CCDC129Q6ZRS4 1044 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 ZSCAN16Q9H4T2 348 aaPredicted RBP8.73□□□□□ -1.01
RGPD1-201ENST00000398193 ELP1O95163 1332 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 RPS8P62241 208 aaKnown RBP8.73□□□□□ -1.01
RGPD1-201ENST00000398193 SCARF1Q14162 830 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 Q6ZUG5 572 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 KRT23Q9C075 422 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 CACNA1SQ13698 1873 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 ZNF532Q9HCE3 1301 aa8.73□□□□□ -1.01
RGPD1-201ENST00000398193 ZNF213O14771 459 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 RASGRF1Q13972 1273 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 SLC9C2Q5TAH2 1124 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 COL4A1P02462 1669 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 CHD4Q14839 1912 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 GOLGA6L3A6NEY3 463 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 TM4SF1P30408 202 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 CRY2Q49AN0 593 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 AIDAQ96BJ3 306 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 STRBPQ96SI9 672 aaKnown RBP8.72□□□□□ -1.01
RGPD1-201ENST00000398193 SEC62Q99442 399 aaKnown RBP8.72□□□□□ -1.01
RGPD1-201ENST00000398193 RNF41Q9H4P4 317 aaPredicted RBP8.72□□□□□ -1.01
RGPD1-201ENST00000398193 MRE11P49959 708 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 MCTP1Q6DN14 999 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 CRAMP1Q96RY5 1269 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 BRIP1Q9BX63 1249 aa8.72□□□□□ -1.01
RGPD1-201ENST00000398193 PUS7LQ9H0K6 701 aaKnown RBP8.72□□□□□ -1.01
RGPD1-201ENST00000398193 FOXP2O15409 715 aa8.71□□□□□ -1.01
RGPD1-201ENST00000398193 GTF2E1P29083 439 aaPredicted RBP8.71□□□□□ -1.01
RGPD1-201ENST00000398193 STOX1Q6ZVD7 989 aa8.71□□□□□ -1.01
RGPD1-201ENST00000398193 CCDC83Q8IWF9 413 aa8.71□□□□□ -1.01
RGPD1-201ENST00000398193 STAG1Q8WVM7 1258 aa8.71□□□□□ -1.01
RGPD1-201ENST00000398193 CCDC88AQ3V6T2 1871 aa8.71□□□□□ -1.01
RGPD1-201ENST00000398193 SYT1P21579 422 aa8.71□□□□□ -1.01
RGPD1-201ENST00000398193 GSTO1P78417 241 aa8.71□□□□□ -1.01
RGPD1-201ENST00000398193 ST3GAL1Q11201 340 aa8.71□□□□□ -1.01
RGPD1-201ENST00000398193 PPP2R5BQ15173 497 aa8.71□□□□□ -1.01
RGPD1-201ENST00000398193 MTMR6Q9Y217 621 aa8.71□□□□□ -1.01
RGPD1-201ENST00000398193 XDHP47989 1333 aa8.71□□□□□ -1.01
RGPD1-201ENST00000398193 FGAP02671 866 aa8.71□□□□□ -1.02
RGPD1-201ENST00000398193 HOXA10P31260 410 aaPredicted RBP8.71□□□□□ -1.02
RGPD1-201ENST00000398193 TRDNQ13061 729 aa8.71□□□□□ -1.02
RGPD1-201ENST00000398193 CNBD1Q8NA66 436 aa8.71□□□□□ -1.02
RGPD1-201ENST00000398193 CDKL5O76039 1030 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms