RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CFAP45Q9UL16 551 aa21.54■■□□□ 1.04
CHRFAM7A-202ENST00000397827 NWD2Q9ULI1 1742 aa21.54■■□□□ 1.04
CHRFAM7A-202ENST00000397827 NHSL1Q5SYE7 1610 aa21.54■■□□□ 1.04
CHRFAM7A-202ENST00000397827 GPAA1O43292 621 aa21.53■■□□□ 1.04
CHRFAM7A-202ENST00000397827 NAA16Q6N069 864 aaPredicted RBP21.53■■□□□ 1.04
CHRFAM7A-202ENST00000397827 CTNNA3Q9UI47 895 aa21.53■■□□□ 1.04
CHRFAM7A-202ENST00000397827 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.53■■□□□ 1.04
CHRFAM7A-202ENST00000397827 SALL1Q9NSC2 1324 aa21.53■■□□□ 1.04
CHRFAM7A-202ENST00000397827 KDM4FA0A1W2PPD8 638 aa21.53■■□□□ 1.04
CHRFAM7A-202ENST00000397827 LUZP1Q86V48 1076 aa21.53■■□□□ 1.04
CHRFAM7A-202ENST00000397827 RAB11FIP4Q86YS3 637 aa21.53■■□□□ 1.04
CHRFAM7A-202ENST00000397827 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
CHRFAM7A-202ENST00000397827 CLSTN2Q9H4D0 955 aa21.53■■□□□ 1.04
CHRFAM7A-202ENST00000397827 FAM200AQ8TCP9 573 aa21.53■■□□□ 1.04
CHRFAM7A-202ENST00000397827 ZSCAN20P17040 1043 aaPredicted RBP21.52■■□□□ 1.04
CHRFAM7A-202ENST00000397827 ANO6Q4KMQ2 910 aa21.52■■□□□ 1.04
CHRFAM7A-202ENST00000397827 KLHL34Q8N239 644 aa21.52■■□□□ 1.04
CHRFAM7A-202ENST00000397827 FDPSP14324 419 aaKnown RBP21.52■■□□□ 1.03
CHRFAM7A-202ENST00000397827 KIAA2012Q0VF49 1180 aa21.52■■□□□ 1.03
CHRFAM7A-202ENST00000397827 A0A0G2JS52 829 aa21.51■■□□□ 1.03
CHRFAM7A-202ENST00000397827 EXOC5O00471 708 aa21.51■■□□□ 1.03
CHRFAM7A-202ENST00000397827 DZIP3Q86Y13 1208 aaKnown RBP21.51■■□□□ 1.03
CHRFAM7A-202ENST00000397827 USP28Q96RU2 1077 aa21.51■■□□□ 1.03
CHRFAM7A-202ENST00000397827 PRC1O43663 620 aa21.51■■□□□ 1.03
CHRFAM7A-202ENST00000397827 SLC9C2Q5TAH2 1124 aa21.51■■□□□ 1.03
CHRFAM7A-202ENST00000397827 VGLL2Q8N8G2 317 aa21.51■■□□□ 1.03
CHRFAM7A-202ENST00000397827 HELBQ8NG08 1087 aaPredicted RBP21.51■■□□□ 1.03
CHRFAM7A-202ENST00000397827 KIF3AQ9Y496 699 aa21.51■■□□□ 1.03
CHRFAM7A-202ENST00000397827 CARMIL3Q8ND23 1372 aa21.51■■□□□ 1.03
CHRFAM7A-202ENST00000397827 UBN2Q6ZU65 1347 aa21.5■■□□□ 1.03
CHRFAM7A-202ENST00000397827 DISP2A7MBM2 1401 aa21.5■■□□□ 1.03
CHRFAM7A-202ENST00000397827 DYNC1I1O14576 645 aa21.5■■□□□ 1.03
CHRFAM7A-202ENST00000397827 SPC24Q8NBT2 197 aa21.5■■□□□ 1.03
CHRFAM7A-202ENST00000397827 DENND2AQ9ULE3 1009 aa21.5■■□□□ 1.03
CHRFAM7A-202ENST00000397827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.5■■□□□ 1.03
CHRFAM7A-202ENST00000397827 IDH1O75874 414 aaKnown RBP21.5■■□□□ 1.03
CHRFAM7A-202ENST00000397827 OTUD7BQ6GQQ9 843 aa21.5■■□□□ 1.03
CHRFAM7A-202ENST00000397827 FAM177BA6PVY3 158 aa21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 ZNF213O14771 459 aa21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 PPP4R3BQ5MIZ7 849 aa21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 MB21D2Q8IYB1 491 aaPredicted RBP21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 C17orf53Q8N3J3 647 aaPredicted RBP21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 AKAP11Q9UKA4 1901 aa21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 LRP6O75581 1613 aa21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 KLF18A0A0U1RQI7 1052 aa21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 PDE8BO95263 885 aa21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 PHKA1P46020 1223 aa21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 ANTXR2P58335 489 aa21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 RBM43Q6ZSC3 357 aaKnown RBP21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 ILDR1Q86SU0 546 aaPredicted RBP21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 CBX8Q9HC52 389 aa21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 PIH1D3Q9NQM4 214 aaKnown RBP21.49■■□□□ 1.03
CHRFAM7A-202ENST00000397827 PDE8AO60658 829 aa21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 ADD2P35612 726 aa21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 CCDC94Q9BW85 323 aaPredicted RBP21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 EVCP57679 992 aa21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 RALYLQ86SE5 291 aaKnown RBP21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 NCOA7Q8NI08 942 aa21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 RCOR1Q9UKL0 485 aa21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 SNAP23O00161 211 aa21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 CCDC102BQ68D86 513 aa21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 SASS6Q6UVJ0 657 aa21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 FBXL16Q8N461 479 aa21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 NKX2-3Q8TAU0 364 aa21.48■■□□□ 1.03
CHRFAM7A-202ENST00000397827 ABCC12Q96J65 1359 aa21.47■■□□□ 1.03
CHRFAM7A-202ENST00000397827 NUP98P52948 1817 aa21.47■■□□□ 1.03
CHRFAM7A-202ENST00000397827 GOLGA8BA8MQT2 603 aa21.47■■□□□ 1.03
CHRFAM7A-202ENST00000397827 CCAR1Q8IX12 1150 aaKnown RBP21.47■■□□□ 1.03
CHRFAM7A-202ENST00000397827 DNAJC25Q9H1X3 360 aa21.47■■□□□ 1.03
CHRFAM7A-202ENST00000397827 MYH7P12883 1935 aa21.47■■□□□ 1.03
CHRFAM7A-202ENST00000397827 MYO5AQ9Y4I1 1855 aaKnown RBP21.47■■□□□ 1.03
CHRFAM7A-202ENST00000397827 MYH3P11055 1940 aa21.47■■□□□ 1.03
CHRFAM7A-202ENST00000397827 GOLPH3LQ9H4A5 285 aa21.47■■□□□ 1.03
CHRFAM7A-202ENST00000397827 GJB4Q9NTQ9 266 aa21.47■■□□□ 1.03
CHRFAM7A-202ENST00000397827 HPS5Q9UPZ3 1129 aa21.47■■□□□ 1.03
CHRFAM7A-202ENST00000397827 APPP05067 770 aa21.46■■□□□ 1.03
CHRFAM7A-202ENST00000397827 NBPF3Q9H094 633 aa21.46■■□□□ 1.03
CHRFAM7A-202ENST00000397827 IL6STP40189 918 aaPredicted RBP21.46■■□□□ 1.03
CHRFAM7A-202ENST00000397827 MYH15Q9Y2K3 1946 aa21.45■■□□□ 1.03
CHRFAM7A-202ENST00000397827 WWC3Q9ULE0 1092 aa21.45■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ZNF532Q9HCE3 1301 aa21.45■■□□□ 1.02
CHRFAM7A-202ENST00000397827 PIBF1Q8WXW3 757 aa21.45■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ANKRD36CQ5JPF3 1778 aa21.45■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ME1P48163 572 aa21.44■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ZNF34Q8IZ26 560 aa21.44■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ZNF396Q96N95 335 aaPredicted RBP21.44■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ERVV-1B6SEH8 477 aa21.44■■□□□ 1.02
CHRFAM7A-202ENST00000397827 POLR3DP05423 398 aaPredicted RBP21.44■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ZNF165P49910 485 aa21.44■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ZSCAN25Q6NSZ9 544 aa21.44■■□□□ 1.02
CHRFAM7A-202ENST00000397827 TBC1D10CQ8IV04 446 aa21.44■■□□□ 1.02
CHRFAM7A-202ENST00000397827 NOLC1Q14978 699 aaKnown RBP eCLIP21.43■■□□□ 1.02
CHRFAM7A-202ENST00000397827 TTF1Q15361 905 aaPredicted RBP21.43■■□□□ 1.02
CHRFAM7A-202ENST00000397827 DNTTIP2Q5QJE6 756 aaKnown RBP21.43■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ZNF512BQ96KM6 892 aaPredicted RBP21.43■■□□□ 1.02
CHRFAM7A-202ENST00000397827 KCNF1Q9H3M0 494 aa21.43■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ORC3Q9UBD5 711 aaPredicted RBP21.43■■□□□ 1.02
CHRFAM7A-202ENST00000397827 SUSD4Q5VX71 490 aa21.43■■□□□ 1.02
CHRFAM7A-202ENST00000397827 ACSBG1Q96GR2 724 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms