RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TICAM2Q86XR7 235 aa27.91■■■□□ 2.06
PABPN1-202ENST00000397276 NR1I2O75469 434 aa27.91■■■□□ 2.06
PABPN1-202ENST00000397276 IL6STP40189 918 aaPredicted RBP27.91■■■□□ 2.06
PABPN1-202ENST00000397276 MAP3K11Q16584 847 aa27.91■■■□□ 2.06
PABPN1-202ENST00000397276 TNMDQ9H2S6 317 aa27.91■■■□□ 2.06
PABPN1-202ENST00000397276 CCDC192P0DO97 292 aa27.9■■■□□ 2.06
PABPN1-202ENST00000397276 VGLL2Q8N8G2 317 aa27.9■■■□□ 2.06
PABPN1-202ENST00000397276 ZSCAN16Q9H4T2 348 aaPredicted RBP27.9■■■□□ 2.06
PABPN1-202ENST00000397276 PIH1D3Q9NQM4 214 aaKnown RBP27.9■■■□□ 2.06
PABPN1-202ENST00000397276 LAMA4Q16363 1823 aa27.9■■■□□ 2.06
PABPN1-202ENST00000397276 ZNF213O14771 459 aa27.9■■■□□ 2.06
PABPN1-202ENST00000397276 APPP05067 770 aa27.9■■■□□ 2.06
PABPN1-202ENST00000397276 DENND2AQ9ULE3 1009 aa27.9■■■□□ 2.06
PABPN1-202ENST00000397276 CCDC102BQ68D86 513 aa27.89■■■□□ 2.06
PABPN1-202ENST00000397276 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.89■■■□□ 2.061e-11■■□□□ 13.8
PABPN1-202ENST00000397276 TAOK2Q9UL54 1235 aa27.89■■■□□ 2.06
PABPN1-202ENST00000397276 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.89■■■□□ 2.06
PABPN1-202ENST00000397276 PRC1O43663 620 aa27.89■■■□□ 2.06
PABPN1-202ENST00000397276 ATP6V1AP38606 617 aa27.89■■■□□ 2.06
PABPN1-202ENST00000397276 HMGN5P82970 282 aaKnown RBP27.89■■■□□ 2.06
PABPN1-202ENST00000397276 ZNF274Q96GC6 653 aaPredicted RBP27.89■■■□□ 2.06
PABPN1-202ENST00000397276 KDM4AO75164 1064 aa27.88■■■□□ 2.05
PABPN1-202ENST00000397276 SUSD4Q5VX71 490 aa27.88■■■□□ 2.05
PABPN1-202ENST00000397276 OTUD7BQ6GQQ9 843 aa27.88■■■□□ 2.05
PABPN1-202ENST00000397276 ZNF34Q8IZ26 560 aa27.88■■■□□ 2.05
PABPN1-202ENST00000397276 ERVV-1B6SEH8 477 aa27.87■■■□□ 2.05
PABPN1-202ENST00000397276 AP5Z1O43299 807 aa27.87■■■□□ 2.05
PABPN1-202ENST00000397276 DDB1Q16531 1140 aa27.87■■■□□ 2.05
PABPN1-202ENST00000397276 RALYLQ86SE5 291 aaKnown RBP27.87■■■□□ 2.05
PABPN1-202ENST00000397276 SEC31BQ9NQW1 1179 aa27.87■■■□□ 2.05
PABPN1-202ENST00000397276 CFAP45Q9UL16 551 aa27.87■■■□□ 2.05
PABPN1-202ENST00000397276 ADD2P35612 726 aa27.87■■■□□ 2.05
PABPN1-202ENST00000397276 NOLC1Q14978 699 aaKnown RBP eCLIP27.87■■■□□ 2.058e-9■□□□□ 9.1
PABPN1-202ENST00000397276 MYRIPQ8NFW9 859 aa27.87■■■□□ 2.05
PABPN1-202ENST00000397276 KLF18A0A0U1RQI7 1052 aa27.86■■■□□ 2.05
PABPN1-202ENST00000397276 ZNF710Q8N1W2 664 aa27.86■■■□□ 2.05
PABPN1-202ENST00000397276 NUTM2BA6NNL0 878 aaPredicted RBP27.85■■■□□ 2.05
PABPN1-202ENST00000397276 NUTM2EB1AL46 878 aaPredicted RBP27.85■■■□□ 2.05
PABPN1-202ENST00000397276 FDPSP14324 419 aaKnown RBP27.85■■■□□ 2.05
PABPN1-202ENST00000397276 TYRO3Q06418 890 aa27.85■■■□□ 2.05
PABPN1-202ENST00000397276 NUTM2AQ8IVF1 878 aaPredicted RBP27.85■■■□□ 2.05
PABPN1-202ENST00000397276 NCOA7Q8NI08 942 aa27.85■■■□□ 2.05
PABPN1-202ENST00000397276 WWC3Q9ULE0 1092 aa27.85■■■□□ 2.05
PABPN1-202ENST00000397276 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.85■■■□□ 2.05
PABPN1-202ENST00000397276 ZNF532Q9HCE3 1301 aa27.85■■■□□ 2.05
PABPN1-202ENST00000397276 ADD1P35611 737 aaKnown RBP27.85■■■□□ 2.05
PABPN1-202ENST00000397276 NAA16Q6N069 864 aaPredicted RBP27.85■■■□□ 2.05
PABPN1-202ENST00000397276 KIF3AQ9Y496 699 aa27.85■■■□□ 2.05
PABPN1-202ENST00000397276 LRP6O75581 1613 aa27.84■■■□□ 2.05
PABPN1-202ENST00000397276 CRKLP46109 303 aaKnown RBP27.84■■■□□ 2.05
PABPN1-202ENST00000397276 ANTXR2P58335 489 aa27.84■■■□□ 2.05
PABPN1-202ENST00000397276 INTS5Q6P9B9 1019 aaKnown RBP27.84■■■□□ 2.05
PABPN1-202ENST00000397276 MB21D2Q8IYB1 491 aaPredicted RBP27.84■■■□□ 2.05
PABPN1-202ENST00000397276 NKX2-3Q8TAU0 364 aa27.84■■■□□ 2.05
PABPN1-202ENST00000397276 PIBF1Q8WXW3 757 aa27.84■■■□□ 2.05
PABPN1-202ENST00000397276 USP28Q96RU2 1077 aa27.84■■■□□ 2.05
PABPN1-202ENST00000397276 MRVI1Q9Y6F6 885 aa27.84■■■□□ 2.05
PABPN1-202ENST00000397276 SALL1Q9NSC2 1324 aa27.84■■■□□ 2.05
PABPN1-202ENST00000397276 GOLGA8BA8MQT2 603 aa27.83■■■□□ 2.05
PABPN1-202ENST00000397276 EIF5P55010 431 aaKnown RBP27.83■■■□□ 2.05
PABPN1-202ENST00000397276 SPEF2Q9C093 1822 aa27.83■■■□□ 2.05
PABPN1-202ENST00000397276 LUZP1Q86V48 1076 aa27.83■■■□□ 2.05
PABPN1-202ENST00000397276 MPHOSPH8Q99549 860 aa27.83■■■□□ 2.05
PABPN1-202ENST00000397276 GJB4Q9NTQ9 266 aa27.83■■■□□ 2.05
PABPN1-202ENST00000397276 CARMIL3Q8ND23 1372 aa27.83■■■□□ 2.05
PABPN1-202ENST00000397276 ZSCAN25Q6NSZ9 544 aa27.82■■■□□ 2.04
PABPN1-202ENST00000397276 DDX19AQ9NUU7 478 aaKnown RBP27.82■■■□□ 2.04
PABPN1-202ENST00000397276 CCDC87Q9NVE4 849 aa27.82■■■□□ 2.04
PABPN1-202ENST00000397276 TTF1Q15361 905 aaPredicted RBP27.82■■■□□ 2.04
PABPN1-202ENST00000397276 PUM3Q15397 648 aaKnown RBP27.82■■■□□ 2.04
PABPN1-202ENST00000397276 ANO6Q4KMQ2 910 aa27.82■■■□□ 2.04
PABPN1-202ENST00000397276 LPIN2Q92539 896 aa27.82■■■□□ 2.04
PABPN1-202ENST00000397276 CLSTN2Q9H4D0 955 aa27.82■■■□□ 2.04
PABPN1-202ENST00000397276 COL14A1Q05707 1796 aaKnown RBP27.81■■■□□ 2.04
PABPN1-202ENST00000397276 PDE6AP16499 860 aa27.81■■■□□ 2.04
PABPN1-202ENST00000397276 MTERF4Q7Z6M4 381 aaKnown RBP27.81■■■□□ 2.04
PABPN1-202ENST00000397276 NBPF3Q9H094 633 aa27.81■■■□□ 2.04
PABPN1-202ENST00000397276 INCENPQ9NQS7 918 aa27.81■■■□□ 2.04
PABPN1-202ENST00000397276 MARCH10Q8NA82 808 aaPredicted RBP27.8■■■□□ 2.04
PABPN1-202ENST00000397276 NWD2Q9ULI1 1742 aa27.8■■■□□ 2.04
PABPN1-202ENST00000397276 LOC102724428A0A0B4J2F2 783 aa27.8■■■□□ 2.04
PABPN1-202ENST00000397276 RXRAP19793 462 aa27.8■■■□□ 2.04
PABPN1-202ENST00000397276 SIK1P57059 783 aa27.8■■■□□ 2.04
PABPN1-202ENST00000397276 TRDNQ13061 729 aa27.8■■■□□ 2.04
PABPN1-202ENST00000397276 ITPK1Q13572 414 aa27.8■■■□□ 2.04
PABPN1-202ENST00000397276 ILDR1Q86SU0 546 aaPredicted RBP27.8■■■□□ 2.04
PABPN1-202ENST00000397276 TBC1D10CQ8IV04 446 aa27.8■■■□□ 2.04
PABPN1-202ENST00000397276 SPC24Q8NBT2 197 aa27.8■■■□□ 2.04
PABPN1-202ENST00000397276 UTP14AQ9BVJ6 771 aaKnown RBP27.8■■■□□ 2.04
PABPN1-202ENST00000397276 HPS5Q9UPZ3 1129 aa27.8■■■□□ 2.04
PABPN1-202ENST00000397276 ABCC12Q96J65 1359 aa27.8■■■□□ 2.04
PABPN1-202ENST00000397276 POLR3DP05423 398 aaPredicted RBP27.79■■■□□ 2.04
PABPN1-202ENST00000397276 CPLX1O14810 134 aa27.79■■■□□ 2.04
PABPN1-202ENST00000397276 FAM200AQ8TCP9 573 aa27.79■■■□□ 2.04
PABPN1-202ENST00000397276 CCDC94Q9BW85 323 aaPredicted RBP27.79■■■□□ 2.04
PABPN1-202ENST00000397276 CCAR1Q8IX12 1150 aaKnown RBP27.78■■■□□ 2.04
PABPN1-202ENST00000397276 AIDAQ96BJ3 306 aa27.78■■■□□ 2.04
PABPN1-202ENST00000397276 NIP7Q9Y221 180 aaKnown RBP eCLIP27.78■■■□□ 2.04
PABPN1-202ENST00000397276 SPATA31A1Q5TZJ5 1347 aa27.78■■■□□ 2.04
PABPN1-202ENST00000397276 NUP98P52948 1817 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms