RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 PUS7LQ9H0K6 701 aaKnown RBP16.1■□□□□ 0.17
CLIC1-209ENST00000395892 DOCK2Q92608 1830 aa16.1■□□□□ 0.17
CLIC1-209ENST00000395892 CPA1P15085 419 aa16.09■□□□□ 0.17
CLIC1-209ENST00000395892 KLRK1P26718 216 aa16.09■□□□□ 0.17
CLIC1-209ENST00000395892 ST5P78524 1137 aa16.09■□□□□ 0.17
CLIC1-209ENST00000395892 EN1Q05925 392 aaPredicted RBP16.09■□□□□ 0.17
CLIC1-209ENST00000395892 CUL4AQ13619 759 aa16.09■□□□□ 0.17
CLIC1-209ENST00000395892 RPAP1Q9BWH6 1393 aaPredicted RBP16.09■□□□□ 0.17
CLIC1-209ENST00000395892 ANKRD31Q8N7Z5 1873 aa16.08■□□□□ 0.17
CLIC1-209ENST00000395892 PDE6AP16499 860 aa16.08■□□□□ 0.16
CLIC1-209ENST00000395892 SLC9C2Q5TAH2 1124 aa16.08■□□□□ 0.16
CLIC1-209ENST00000395892 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
CLIC1-209ENST00000395892 TMX3Q96JJ7 454 aa16.08■□□□□ 0.16
CLIC1-209ENST00000395892 JAKMIP1Q96N16 626 aaKnown RBP16.08■□□□□ 0.16
CLIC1-209ENST00000395892 CRAMP1Q96RY5 1269 aa16.08■□□□□ 0.16
CLIC1-209ENST00000395892 ALDH8A1Q9H2A2 487 aaPredicted RBP16.08■□□□□ 0.16
CLIC1-209ENST00000395892 ANO8Q9HCE9 1232 aaPredicted RBP16.08■□□□□ 0.16
CLIC1-209ENST00000395892 CHMP5Q9NZZ3 219 aa16.08■□□□□ 0.16
CLIC1-209ENST00000395892 WWC3Q9ULE0 1092 aa16.08■□□□□ 0.16
CLIC1-209ENST00000395892 NPHP1O15259 732 aa16.07■□□□□ 0.16
CLIC1-209ENST00000395892 CYP21A2P08686 494 aa16.07■□□□□ 0.16
CLIC1-209ENST00000395892 ZKSCAN1P17029 563 aaPredicted RBP16.07■□□□□ 0.16
CLIC1-209ENST00000395892 KCNJ4P48050 445 aa16.07■□□□□ 0.16
CLIC1-209ENST00000395892 SLC15A2Q16348 729 aa16.07■□□□□ 0.16
CLIC1-209ENST00000395892 C15orf52Q6ZUT6 534 aaKnown RBP16.07■□□□□ 0.16
CLIC1-209ENST00000395892 RUFY3Q7L099 469 aa16.07■□□□□ 0.16
CLIC1-209ENST00000395892 TXNRD3Q86VQ6 643 aa16.07■□□□□ 0.16
CLIC1-209ENST00000395892 RBM17Q96I25 401 aaKnown RBP16.07■□□□□ 0.16
CLIC1-209ENST00000395892 BRIP1Q9BX63 1249 aa16.07■□□□□ 0.16
CLIC1-209ENST00000395892 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.07■□□□□ 0.163e-6■□□□□ 10.3
CLIC1-209ENST00000395892 COL1A1P02452 1464 aaPredicted RBP16.06■□□□□ 0.16
CLIC1-209ENST00000395892 ZNF532Q9HCE3 1301 aa16.06■□□□□ 0.16
CLIC1-209ENST00000395892 A0A0G2JLW4 131 aa16.06■□□□□ 0.16
CLIC1-209ENST00000395892 BBOX1O75936 387 aa16.06■□□□□ 0.16
CLIC1-209ENST00000395892 CASTP20810 708 aaKnown RBP16.06■□□□□ 0.16
CLIC1-209ENST00000395892 AK2P54819 239 aa16.06■□□□□ 0.16
CLIC1-209ENST00000395892 WASHC4Q2M389 1173 aa16.06■□□□□ 0.16
CLIC1-209ENST00000395892 RNF20Q5VTR2 975 aa16.06■□□□□ 0.16
CLIC1-209ENST00000395892 RPGRQ92834 1020 aaKnown RBP16.06■□□□□ 0.16
CLIC1-209ENST00000395892 CIZ1Q9ULV3 898 aaPredicted RBP16.06■□□□□ 0.16
CLIC1-209ENST00000395892 LEMD3Q9Y2U8 911 aa16.06■□□□□ 0.16
CLIC1-209ENST00000395892 IDH1O75874 414 aaKnown RBP16.05■□□□□ 0.16
CLIC1-209ENST00000395892 GPSM2P81274 684 aa16.05■□□□□ 0.16
CLIC1-209ENST00000395892 CAVIN4Q5BKX8 364 aa16.05■□□□□ 0.16
CLIC1-209ENST00000395892 STOX1Q6ZVD7 989 aa16.05■□□□□ 0.16
CLIC1-209ENST00000395892 GNL3LQ9NVN8 582 aaKnown RBP16.05■□□□□ 0.16
CLIC1-209ENST00000395892 IQSEC3Q9UPP2 1182 aaPredicted RBP16.05■□□□□ 0.16
CLIC1-209ENST00000395892 PDS5AQ29RF7 1337 aaKnown RBP16.04■□□□□ 0.16
CLIC1-209ENST00000395892 SEMA3EO15041 775 aa16.04■□□□□ 0.16
CLIC1-209ENST00000395892 GPAA1O43292 621 aa16.04■□□□□ 0.16
CLIC1-209ENST00000395892 MMP10P09238 476 aa16.04■□□□□ 0.16
CLIC1-209ENST00000395892 PSMA5P28066 241 aa16.04■□□□□ 0.16
CLIC1-209ENST00000395892 HIBADHP31937 336 aaKnown RBP16.04■□□□□ 0.16
CLIC1-209ENST00000395892 MAP3K12Q12852 859 aa16.04■□□□□ 0.16
CLIC1-209ENST00000395892 NFKBIBQ15653 356 aa16.04■□□□□ 0.16
CLIC1-209ENST00000395892 TTLL5Q6EMB2 1281 aa16.04■□□□□ 0.16
CLIC1-209ENST00000395892 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
CLIC1-209ENST00000395892 PDRG1Q9NUG6 133 aa16.04■□□□□ 0.16
CLIC1-209ENST00000395892 DENND2AQ9ULE3 1009 aa16.04■□□□□ 0.16
CLIC1-209ENST00000395892 CYP46A1Q9Y6A2 500 aa16.04■□□□□ 0.16
CLIC1-209ENST00000395892 QSER1Q2KHR3 1735 aa16.04■□□□□ 0.16
CLIC1-209ENST00000395892 FGAP02671 866 aa16.03■□□□□ 0.16
CLIC1-209ENST00000395892 SRGNP10124 158 aa16.03■□□□□ 0.16
CLIC1-209ENST00000395892 RPS6KB1P23443 525 aa16.03■□□□□ 0.16
CLIC1-209ENST00000395892 KRT32Q14532 448 aa16.03■□□□□ 0.16
CLIC1-209ENST00000395892 ZGPATQ8N5A5 531 aaKnown RBP16.03■□□□□ 0.16
CLIC1-209ENST00000395892 MAGEB6Q8N7X4 407 aa16.03■□□□□ 0.16
CLIC1-209ENST00000395892 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
CLIC1-209ENST00000395892 LIMCH1Q9UPQ0 1083 aa16.03■□□□□ 0.16
CLIC1-209ENST00000395892 XDHP47989 1333 aa16.02■□□□□ 0.16
CLIC1-209ENST00000395892 ALX1Q15699 326 aa16.02■□□□□ 0.16
CLIC1-209ENST00000395892 SP8Q8IXZ3 490 aa16.02■□□□□ 0.16
CLIC1-209ENST00000395892 ZNF384Q8TF68 577 aa16.02■□□□□ 0.16
CLIC1-209ENST00000395892 INTS4Q96HW7 963 aaKnown RBP16.02■□□□□ 0.16
CLIC1-209ENST00000395892 CWC22Q9HCG8 908 aaKnown RBP16.02■□□□□ 0.16
CLIC1-209ENST00000395892 STK32BQ9NY57 414 aa16.02■□□□□ 0.16
CLIC1-209ENST00000395892 PARP3Q9Y6F1 533 aa16.02■□□□□ 0.16
CLIC1-209ENST00000395892 ATP2B4P23634 1241 aa16.01■□□□□ 0.15
CLIC1-209ENST00000395892 EXOSC10Q01780 885 aaKnown RBP16.01■□□□□ 0.15
CLIC1-209ENST00000395892 BLOC1S2Q6QNY1 142 aa16.01■□□□□ 0.15
CLIC1-209ENST00000395892 TDRD7Q8NHU6 1098 aaKnown RBP16.01■□□□□ 0.15
CLIC1-209ENST00000395892 NEK1Q96PY6 1258 aa16.01■□□□□ 0.15
CLIC1-209ENST00000395892 LAMA4Q16363 1823 aa16.01■□□□□ 0.15
CLIC1-209ENST00000395892 LRRC37AA6NMS7 1700 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 LTBP1Q14766 1721 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 CACNA1SQ13698 1873 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 PATL2C9JE40 543 aaKnown RBP16■□□□□ 0.15
CLIC1-209ENST00000395892 E7EWF7 191 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 LARGE1O95461 756 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 NPR1P16066 1061 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 TOB2Q14106 344 aaPredicted RBP16■□□□□ 0.15
CLIC1-209ENST00000395892 RAB3GAP1Q15042 981 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 MSL1Q68DK7 614 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 TMC4Q7Z404 712 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 DEFB132Q7Z7B7 95 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 LARP6Q9BRS8 491 aaKnown RBP16■□□□□ 0.15
CLIC1-209ENST00000395892 ANKIB1Q9P2G1 1089 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 LRP2BPQ9P2M1 347 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 CTNNA3Q9UI47 895 aa16■□□□□ 0.15
CLIC1-209ENST00000395892 FRAT2O75474 233 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 1345 ms