RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
UBE2D3-209ENST00000394804 USP28Q96RU2 1077 aa13.49□□□□□ -0.25
UBE2D3-209ENST00000394804 XIRP1Q702N8 1843 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 CYP21A2P08686 494 aa13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 HSPA1LP34931 641 aa13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 UBASH3AP57075 661 aa13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 SSRP1Q08945 709 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 TMEM67Q5HYA8 995 aa13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 CCDC196A0A1B0GTZ2 297 aa13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 KRT222Q8N1A0 295 aa13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 E7EWF7 191 aa13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 HSP90AB3PQ58FF7 597 aa13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 CCDC144CPQ8IYA2 1237 aa13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 ZNF397Q8NF99 534 aaPredicted RBP13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 CCDC47Q96A33 483 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 V9GYY5 206 aaPredicted RBP13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 NCAPD2Q15021 1401 aa13.48□□□□□ -0.25
UBE2D3-209ENST00000394804 ZBTB43O43298 467 aa13.47□□□□□ -0.25
UBE2D3-209ENST00000394804 ZCRB1Q8TBF4 217 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-209ENST00000394804 NUTM2BA6NNL0 878 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-209ENST00000394804 NUTM2EB1AL46 878 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-209ENST00000394804 TUBB4AP04350 444 aa13.47□□□□□ -0.25
UBE2D3-209ENST00000394804 SCRN1Q12765 414 aa13.47□□□□□ -0.25
UBE2D3-209ENST00000394804 NUTM2AQ8IVF1 878 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-209ENST00000394804 GPTP24298 496 aa13.47□□□□□ -0.25
UBE2D3-209ENST00000394804 U2AF2P26368 475 aaKnown RBP eCLIP13.47□□□□□ -0.253e-9■■■□□ 15
UBE2D3-209ENST00000394804 MRFAP1L1Q96HT8 127 aa13.47□□□□□ -0.25
UBE2D3-209ENST00000394804 OGFRQ9NZT2 677 aa13.47□□□□□ -0.25
UBE2D3-209ENST00000394804 PHKG2P15735 406 aa13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 ZNF274Q96GC6 653 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 DCCP43146 1447 aa13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 A0A0U1RQG5 324 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 TNNT3P45378 269 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 CCDC191Q8NCU4 936 aa13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 SLC26A6Q9BXS9 759 aa13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 RESTQ13127 1097 aa13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 TOB2Q14106 344 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 CABLES1Q8TDN4 633 aa13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 LRP2BPQ9P2M1 347 aa13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 NRBP1Q9UHY1 535 aa13.46□□□□□ -0.25
UBE2D3-209ENST00000394804 BMS1Q14692 1282 aaKnown RBP13.46□□□□□ -0.26
UBE2D3-209ENST00000394804 SLC9C2Q5TAH2 1124 aa13.46□□□□□ -0.26
UBE2D3-209ENST00000394804 TTLL5Q6EMB2 1281 aa13.46□□□□□ -0.26
UBE2D3-209ENST00000394804 OTUD7BQ6GQQ9 843 aa13.46□□□□□ -0.26
UBE2D3-209ENST00000394804 CCDC82Q8N4S0 544 aa13.46□□□□□ -0.26
UBE2D3-209ENST00000394804 ACBD3Q9H3P7 528 aa13.46□□□□□ -0.26
UBE2D3-209ENST00000394804 SPTLC3Q9NUV7 552 aa13.46□□□□□ -0.26
UBE2D3-209ENST00000394804 TRMT112Q9UI30 125 aaKnown RBP13.46□□□□□ -0.26
UBE2D3-209ENST00000394804 GOLGA6L9A6NEM1 432 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 HSP90B2PQ58FF3 399 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 ERO1AQ96HE7 468 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 ZNF594Q96JF6 807 aaPredicted RBP13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 PCMTD1Q96MG8 357 aaPredicted RBP13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 DNAI1Q9UI46 699 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 TXLNAP40222 546 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 TAF3Q5VWG9 929 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 ANO1Q5XXA6 986 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 NSUN7Q8NE18 718 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 APPBP2Q92624 585 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 GNL3LQ9NVN8 582 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 YEATS4O95619 227 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 IGKV5-2P06315 115 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 HSPD1P10809 573 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 PTPN12Q05209 780 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 ADALQ6DHV7 355 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 CCDC70Q6NSX1 233 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 IMPACTQ9P2X3 320 aa13.45□□□□□ -0.26
UBE2D3-209ENST00000394804 UQCRFS1P1P0C7P4 283 aa13.44□□□□□ -0.26
UBE2D3-209ENST00000394804 CASQ1P31415 396 aa13.44□□□□□ -0.26
UBE2D3-209ENST00000394804 RGPD8O14715 1765 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-209ENST00000394804 SLC5A1P13866 664 aa13.44□□□□□ -0.26
UBE2D3-209ENST00000394804 RCOR1Q9UKL0 485 aa13.44□□□□□ -0.26
UBE2D3-209ENST00000394804 CDC25BP30305 580 aa13.44□□□□□ -0.26
UBE2D3-209ENST00000394804 KLHL10Q6JEL2 608 aa13.44□□□□□ -0.26
UBE2D3-209ENST00000394804 LRRC8AQ8IWT6 810 aa13.44□□□□□ -0.26
UBE2D3-209ENST00000394804 AMOTL1Q8IY63 956 aa13.44□□□□□ -0.26
UBE2D3-209ENST00000394804 SYT10Q6XYQ8 523 aa13.43□□□□□ -0.26
UBE2D3-209ENST00000394804 FBXO41Q8TF61 875 aa13.43□□□□□ -0.26
UBE2D3-209ENST00000394804 ERCC4Q92889 916 aaPredicted RBP13.43□□□□□ -0.26
UBE2D3-209ENST00000394804 RNF41Q9H4P4 317 aaPredicted RBP13.43□□□□□ -0.26
UBE2D3-209ENST00000394804 CEMIPQ8WUJ3 1361 aa13.43□□□□□ -0.26
UBE2D3-209ENST00000394804 CACTINQ8WUQ7 758 aaKnown RBP13.43□□□□□ -0.26
UBE2D3-209ENST00000394804 ZNF202O95125 648 aa13.43□□□□□ -0.26
UBE2D3-209ENST00000394804 MYL5Q02045 173 aa13.43□□□□□ -0.26
UBE2D3-209ENST00000394804 ALDH8A1Q9H2A2 487 aaPredicted RBP13.43□□□□□ -0.26
UBE2D3-209ENST00000394804 ERICH4A6NGS2 130 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 MYSM1Q5VVJ2 828 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 KANK3Q6NY19 840 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 MFSD6Q6ZSS7 791 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 XAGE2Q96GT9 111 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 KIAA1468Q9P260 1216 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 PDIA3P30101 505 aaKnown RBP13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 GNG11P61952 73 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 ARHGAP29Q52LW3 1261 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 EPHA10Q5JZY3 1008 aa13.42□□□□□ -0.26
UBE2D3-209ENST00000394804 ZMYM1Q5SVZ6 1142 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms