RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 NUP88Q99567 741 aaPredicted RBP19.04■□□□□ 0.64
SCN3B-202ENST00000392770 ZSCAN12O43309 604 aa19.04■□□□□ 0.64
SCN3B-202ENST00000392770 NAPAP54920 295 aa19.04■□□□□ 0.64
SCN3B-202ENST00000392770 ANO6Q4KMQ2 910 aa19.04■□□□□ 0.64
SCN3B-202ENST00000392770 DACT1Q9NYF0 836 aa19.04■□□□□ 0.64
SCN3B-202ENST00000392770 BMP15O95972 392 aa19.04■□□□□ 0.64
SCN3B-202ENST00000392770 APPBP2Q92624 585 aa19.04■□□□□ 0.64
SCN3B-202ENST00000392770 KBTBD3Q8NAB2 608 aa19.04■□□□□ 0.64
SCN3B-202ENST00000392770 CPLX3Q8WVH0 158 aa19.04■□□□□ 0.64
SCN3B-202ENST00000392770 SETBP1Q9Y6X0 1596 aa19.03■□□□□ 0.64
SCN3B-202ENST00000392770 KRT2P35908 639 aa19.03■□□□□ 0.64
SCN3B-202ENST00000392770 EYA3Q99504 573 aa19.03■□□□□ 0.64
SCN3B-202ENST00000392770 CTSWP56202 376 aa19.03■□□□□ 0.64
SCN3B-202ENST00000392770 PTPN14Q15678 1187 aa19.03■□□□□ 0.64
SCN3B-202ENST00000392770 B4E1Z4 1266 aa19.03■□□□□ 0.64
SCN3B-202ENST00000392770 LMTK2Q8IWU2 1503 aa19.03■□□□□ 0.64
SCN3B-202ENST00000392770 GPAA1O43292 621 aa19.03■□□□□ 0.64
SCN3B-202ENST00000392770 AFMP43652 599 aa19.03■□□□□ 0.64
SCN3B-202ENST00000392770 OGFOD1Q8N543 542 aa19.03■□□□□ 0.64
SCN3B-202ENST00000392770 SAP30BPQ9UHR5 308 aaKnown RBP19.03■□□□□ 0.64
SCN3B-202ENST00000392770 PRKCSHP14314 528 aaPredicted RBP19.02■□□□□ 0.64
SCN3B-202ENST00000392770 RDXP35241 583 aaKnown RBP19.02■□□□□ 0.64
SCN3B-202ENST00000392770 SKIDA1Q1XH10 827 aa19.02■□□□□ 0.64
SCN3B-202ENST00000392770 PROSER3Q2NL68 480 aa19.02■□□□□ 0.64
SCN3B-202ENST00000392770 CACNA2D4Q7Z3S7 1137 aa19.02■□□□□ 0.64
SCN3B-202ENST00000392770 IBTKQ9P2D0 1353 aaPredicted RBP19.02■□□□□ 0.64
SCN3B-202ENST00000392770 KIF20AO95235 890 aa19.02■□□□□ 0.64
SCN3B-202ENST00000392770 SPA17Q15506 151 aa19.02■□□□□ 0.64
SCN3B-202ENST00000392770 CCDC24Q8N4L8 307 aa19.02■□□□□ 0.64
SCN3B-202ENST00000392770 SPATA5Q8NB90 893 aa19.02■□□□□ 0.64
SCN3B-202ENST00000392770 SPTLC2O15270 562 aa19.02■□□□□ 0.63
SCN3B-202ENST00000392770 IDEP14735 1019 aa19.02■□□□□ 0.63
SCN3B-202ENST00000392770 ZAP70P43403 619 aa19.02■□□□□ 0.63
SCN3B-202ENST00000392770 CAVIN2O95810 425 aa19.01■□□□□ 0.63
SCN3B-202ENST00000392770 SYT1P21579 422 aa19.01■□□□□ 0.63
SCN3B-202ENST00000392770 RRP36Q96EU6 259 aaKnown RBP19.01■□□□□ 0.63
SCN3B-202ENST00000392770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.01■□□□□ 0.63
SCN3B-202ENST00000392770 INO80Q9ULG1 1556 aaPredicted RBP19.01■□□□□ 0.63
SCN3B-202ENST00000392770 STAT6P42226 847 aa19.01■□□□□ 0.63
SCN3B-202ENST00000392770 ZNF853P0CG23 659 aa19.01■□□□□ 0.63
SCN3B-202ENST00000392770 MTIF2P46199 727 aaKnown RBP19.01■□□□□ 0.63
SCN3B-202ENST00000392770 RBM28Q9NW13 759 aaKnown RBP19.01■□□□□ 0.63
SCN3B-202ENST00000392770 ATP5JP18859 108 aa19■□□□□ 0.63
SCN3B-202ENST00000392770 GSDMDP57764 484 aa19■□□□□ 0.63
SCN3B-202ENST00000392770 PPP4R3AQ6IN85 833 aa19■□□□□ 0.63
SCN3B-202ENST00000392770 LAMC1P11047 1609 aa19■□□□□ 0.63
SCN3B-202ENST00000392770 WDR78Q5VTH9 848 aa19■□□□□ 0.63
SCN3B-202ENST00000392770 CARD10Q9BWT7 1032 aa19■□□□□ 0.63
SCN3B-202ENST00000392770 CASQ1P31415 396 aa19■□□□□ 0.63
SCN3B-202ENST00000392770 IQCEQ6IPM2 695 aa19■□□□□ 0.63
SCN3B-202ENST00000392770 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19■□□□□ 0.63
SCN3B-202ENST00000392770 EXOC1Q9NV70 894 aa19■□□□□ 0.63
SCN3B-202ENST00000392770 RMND1Q9NWS8 449 aa19■□□□□ 0.63
SCN3B-202ENST00000392770 GGA1Q9UJY5 639 aa18.99■□□□□ 0.63
SCN3B-202ENST00000392770 WWC3Q9ULE0 1092 aa18.99■□□□□ 0.63
SCN3B-202ENST00000392770 PRAMEF22A3QJZ6 481 aa18.99■□□□□ 0.63
SCN3B-202ENST00000392770 VEZTQ9HBM0 779 aa18.99■□□□□ 0.63
SCN3B-202ENST00000392770 C6orf50Q9HD87 102 aa18.99■□□□□ 0.63
SCN3B-202ENST00000392770 KIF2AO00139 706 aaPredicted RBP18.99■□□□□ 0.63
SCN3B-202ENST00000392770 NEMFO60524 1076 aa18.99■□□□□ 0.63
SCN3B-202ENST00000392770 BRAPQ7Z569 592 aa18.99■□□□□ 0.63
SCN3B-202ENST00000392770 SETQ01105 290 aaPredicted RBP18.99■□□□□ 0.63
SCN3B-202ENST00000392770 RRAGBQ5VZM2 374 aa18.99■□□□□ 0.63
SCN3B-202ENST00000392770 YEATS4O95619 227 aa18.99■□□□□ 0.63
SCN3B-202ENST00000392770 LRRC27Q9C0I9 530 aa18.99■□□□□ 0.63
SCN3B-202ENST00000392770 DIP2CQ9Y2E4 1556 aa18.98■□□□□ 0.63
SCN3B-202ENST00000392770 TRIM75PA6NK02 468 aa18.98■□□□□ 0.63
SCN3B-202ENST00000392770 HSPA4P34932 840 aa18.98■□□□□ 0.63
SCN3B-202ENST00000392770 VSIG10Q8N0Z9 540 aa18.98■□□□□ 0.63
SCN3B-202ENST00000392770 TRMT1Q9NXH9 659 aaKnown RBP18.98■□□□□ 0.63
SCN3B-202ENST00000392770 FAM114A1Q8IWE2 563 aa18.98■□□□□ 0.63
SCN3B-202ENST00000392770 TEX11Q8IYF3 940 aa18.98■□□□□ 0.63
SCN3B-202ENST00000392770 ZBTB38Q8NAP3 1195 aaPredicted RBP18.98■□□□□ 0.63
SCN3B-202ENST00000392770 ERBB3P21860 1342 aa18.98■□□□□ 0.63
SCN3B-202ENST00000392770 ERBB4Q15303 1308 aa18.98■□□□□ 0.63
SCN3B-202ENST00000392770 ZNF532Q9HCE3 1301 aa18.98■□□□□ 0.63
SCN3B-202ENST00000392770 KIF5CO60282 957 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 CTDSPL2Q05D32 466 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 DNAJC25Q9H1X3 360 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 TMEM87BQ96K49 555 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 ERLIN1O75477 346 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 ERLIN2O94905 339 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 CCDC40Q4G0X9 1142 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 TAF4BQ92750 862 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 EDC3Q96F86 508 aaKnown RBP18.97■□□□□ 0.63
SCN3B-202ENST00000392770 SAMM50Q9Y512 469 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 WDR17Q8IZU2 1322 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 CALML3P27482 149 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 TRMT1LQ7Z2T5 733 aaKnown RBP18.97■□□□□ 0.63
SCN3B-202ENST00000392770 DHX58Q96C10 678 aa18.97■□□□□ 0.63
SCN3B-202ENST00000392770 AATFQ9NY61 560 aaKnown RBP eCLIP18.96■□□□□ 0.63
SCN3B-202ENST00000392770 FAM200AQ8TCP9 573 aa18.96■□□□□ 0.63
SCN3B-202ENST00000392770 SCLT1Q96NL6 688 aa18.96■□□□□ 0.63
SCN3B-202ENST00000392770 TMX1Q9H3N1 280 aa18.96■□□□□ 0.63
SCN3B-202ENST00000392770 CHMP4BP1P59074 171 aa18.96■□□□□ 0.63
SCN3B-202ENST00000392770 ENOX2Q16206 610 aaKnown RBP18.96■□□□□ 0.63
SCN3B-202ENST00000392770 EAF2Q96CJ1 260 aaPredicted RBP18.96■□□□□ 0.63
SCN3B-202ENST00000392770 TULP4Q9NRJ4 1543 aa18.95■□□□□ 0.62
SCN3B-202ENST00000392770 MCM7P33993 719 aa18.95■□□□□ 0.62
SCN3B-202ENST00000392770 NCOA5Q9HCD5 579 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms