RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 XIRP1Q702N8 1843 aaKnown RBP3.33□□□□□ -1.88
TRAV41-201ENST00000390468 CDK2AP1O14519 115 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 APPP05067 770 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 ADH7P40394 386 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 RGS3P49796 1198 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 IRF5Q13568 498 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 MCM6Q14566 821 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 UTP14CQ5TAP6 766 aaKnown RBP3.33□□□□□ -1.88
TRAV41-201ENST00000390468 TICAM2Q86XR7 235 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 WWC1Q8IX03 1113 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 CNPY4Q8N129 248 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 CCDC82Q8N4S0 544 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.33□□□□□ -1.88
TRAV41-201ENST00000390468 RHPN1Q8TCX5 695 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 ZNF622Q969S3 477 aaKnown RBP eCLIP3.33□□□□□ -1.88
TRAV41-201ENST00000390468 NACC1Q96RE7 527 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 GDPD2Q9HCC8 539 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 ZDHHC3Q9NYG2 299 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 PRDM4Q9UKN5 801 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 IQSEC3Q9UPP2 1182 aaPredicted RBP3.33□□□□□ -1.88
TRAV41-201ENST00000390468 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.33□□□□□ -1.88
TRAV41-201ENST00000390468 KIF7Q2M1P5 1343 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 ADGRF5Q8IZF2 1346 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.33□□□□□ -1.88
TRAV41-201ENST00000390468 STRCP1A6NGW2 1772 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 LTN1O94822 1766 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 STRCQ7RTU9 1775 aa3.33□□□□□ -1.88
TRAV41-201ENST00000390468 DLG5Q8TDM6 1919 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 ST20-MTHFSA0A0A6YYL1 179 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 ZBTB7CA1YPR0 619 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 GOLGA6L3A6NEY3 463 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 PIK3CDO00329 1044 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 EFSO43281 561 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 ANP32CO43423 234 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 SKIP12755 728 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 MCCP23508 829 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 TMF1P82094 1093 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 SPEM2Q0P670 501 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 CFAP70Q5T0N1 1121 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 SH3PXD2AQ5TCZ1 1133 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 SHISA2Q6UWI4 295 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 PROSER2Q86WR7 435 aaPredicted RBP3.32□□□□□ -1.88
TRAV41-201ENST00000390468 MICALL1Q8N3F8 863 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.32□□□□□ -1.88
TRAV41-201ENST00000390468 ZDHHC1Q8WTX9 485 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 NUDT8Q8WV74 236 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 SECISBP2LQ93073 1101 aaKnown RBP3.32□□□□□ -1.88
TRAV41-201ENST00000390468 BHMTQ93088 406 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 CEP63Q96MT8 703 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 UBE2OQ9C0C9 1292 aaKnown RBP3.32□□□□□ -1.88
TRAV41-201ENST00000390468 USP21Q9UK80 565 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 STARD13Q9Y3M8 1113 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 YTHDC2Q9H6S0 1430 aaKnown RBP3.32□□□□□ -1.88
TRAV41-201ENST00000390468 PTPRMP28827 1452 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 ARHGAP23Q9P227 1491 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 TULP4Q9NRJ4 1543 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 ADGRB2O60241 1585 aa3.32□□□□□ -1.88
TRAV41-201ENST00000390468 NRKQ7Z2Y5 1582 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 DISP3Q9P2K9 1392 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 TMEM2Q9UHN6 1383 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 SBNO2Q9Y2G9 1366 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 SFI1A8K8P3 1242 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 CCER2I3L3R5 266 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 BACH1O14867 736 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 LILRB5O75023 590 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 SIN3BO75182 1162 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 KIF20AO95235 890 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 CEBPAP49715 358 aaPredicted RBP3.31□□□□□ -1.88
TRAV41-201ENST00000390468 FAM193AP78312 1265 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 GTF2IP78347 998 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 LAMC2Q13753 1193 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 EML3Q32P44 896 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 MAP7D1Q3KQU3 841 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 CDCA8Q53HL2 280 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 DNTTIP2Q5QJE6 756 aaKnown RBP3.31□□□□□ -1.88
TRAV41-201ENST00000390468 LCE3BQ5TA77 95 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 SAMD5Q5TGI4 173 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 SLC9A9Q8IVB4 645 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 TNS4Q8IZW8 715 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 ZNF295-AS1Q8N0V1 137 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 DEPDC4Q8N2C3 294 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 TP53INP1Q96A56 240 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 CCDC97Q96F63 343 aaPredicted RBP3.31□□□□□ -1.88
TRAV41-201ENST00000390468 HSH2DQ96JZ2 352 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 PLCD4Q9BRC7 762 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 C14orf93Q9H972 538 aaKnown RBP3.31□□□□□ -1.88
TRAV41-201ENST00000390468 JPH1Q9HDC5 661 aaPredicted RBP3.31□□□□□ -1.88
TRAV41-201ENST00000390468 BRD7Q9NPI1 651 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 ZNF358Q9NW07 568 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 TRAK1Q9UPV9 953 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 HCN4Q9Y3Q4 1203 aa3.31□□□□□ -1.88
TRAV41-201ENST00000390468 RGPD5Q99666 1765 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 NWD1Q149M9 1564 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 PLEKHG1Q9ULL1 1385 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 SERTM1A2A2V5 107 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 C9orf172C9J069 976 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 PATL2C9JE40 543 aaKnown RBP3.3□□□□□ -1.88
TRAV41-201ENST00000390468 SOCS7O14512 581 aa3.3□□□□□ -1.88
TRAV41-201ENST00000390468 LETM1O95202 739 aaPredicted RBP3.3□□□□□ -1.88
TRAV41-201ENST00000390468 NID1P14543 1247 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms