RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 PTGS1P23219 599 aa13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 PDIA3P30101 505 aaKnown RBP13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 CHAF1AQ13111 956 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 SMARCC2Q8TAQ2 1214 aa13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 PIBF1Q8WXW3 757 aa13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 SYTL4Q96C24 671 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 NRBP1Q9UHY1 535 aa13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 KCPQ6ZWJ8 1503 aa13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 FOXP2O15409 715 aa13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 CCDC158Q5M9N0 1113 aa13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 DRC7Q8IY82 874 aa13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 PIGBQ92521 554 aa13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 ISCA1Q9BUE6 129 aa13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 COL5A2P05997 1499 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF3-201ENST00000389212 ADD1P35611 737 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 GOLPH3LQ9H4A5 285 aa13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 RFX7Q2KHR2 1363 aa13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 NKX2-3Q8TAU0 364 aa13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 DDX19AQ9NUU7 478 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 TJP1Q07157 1748 aa13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 FGAP02671 866 aa13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 LRMPQ12912 555 aa13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 CCAR1Q8IX12 1150 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 GPR108Q9NPR9 543 aa13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 SLAIN2Q9P270 581 aa13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 LAMA4Q16363 1823 aa13.68□□□□□ -0.22
RAPGEF3-201ENST00000389212 IFIT5Q13325 482 aaKnown RBP13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 METTL24Q5JXM2 366 aa13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 CARD10Q9BWT7 1032 aa13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 TRIM5Q9C035 493 aa13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 GREM2Q9H772 168 aa13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 DCCP43146 1447 aa13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 LAMB4A4D0S4 1761 aa13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 SNAP23O00161 211 aa13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 CLGNO14967 610 aa13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 POLR3DP05423 398 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 HMGB1P09429 215 aaKnown RBP13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 ZNF165P49910 485 aa13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 MYRIPQ8NFW9 859 aa13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 HELBQ8NG08 1087 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 ZNF335Q9H4Z2 1342 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF3-201ENST00000389212 PRR29P0C7W0 189 aa13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 RXRAP19793 462 aa13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 ILDR1Q86SU0 546 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 CIAO1O76071 339 aa13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 FDPSP14324 419 aaKnown RBP13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 ME1P48163 572 aa13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 HMGN5P82970 282 aaKnown RBP13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 NKX1-1Q15270 411 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 LDHAL6AQ6ZMR3 332 aa13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 C11orf57Q6ZUT1 292 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 CCDC186Q7Z3E2 898 aa13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 ZSCAN16Q9H4T2 348 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 CFAP45Q9UL16 551 aa13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
RAPGEF3-201ENST00000389212 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 PRC1O43663 620 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 ITGA6P23229 1130 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 MCAMP43121 646 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 BCL2L12Q9HB09 334 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 GOLGA8BA8MQT2 603 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 GPAA1O43292 621 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 CNNM1Q9NRU3 951 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 ATG3Q9NT62 314 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 NUP188Q5SRE5 1749 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 CARMIL3Q8ND23 1372 aa13.65□□□□□ -0.22
RAPGEF3-201ENST00000389212 IDH1O75874 414 aaKnown RBP13.65□□□□□ -0.23
RAPGEF3-201ENST00000389212 LLPHQ9BRT6 129 aaKnown RBP13.65□□□□□ -0.23
RAPGEF3-201ENST00000389212 INCENPQ9NQS7 918 aa13.65□□□□□ -0.23
RAPGEF3-201ENST00000389212 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
RAPGEF3-201ENST00000389212 CCDC144CPQ8IYA2 1237 aa13.64□□□□□ -0.23
RAPGEF3-201ENST00000389212 FSIP1Q8NA03 581 aa13.64□□□□□ -0.23
RAPGEF3-201ENST00000389212 SLC4A9Q96Q91 983 aa13.64□□□□□ -0.23
RAPGEF3-201ENST00000389212 BTG4Q9NY30 223 aa13.64□□□□□ -0.23
RAPGEF3-201ENST00000389212 ANTXR2P58335 489 aa13.64□□□□□ -0.23
RAPGEF3-201ENST00000389212 STK11IPQ8N1F8 1099 aa13.64□□□□□ -0.23
RAPGEF3-201ENST00000389212 AIFM3Q96NN9 605 aa13.64□□□□□ -0.23
RAPGEF3-201ENST00000389212 AGXT2Q9BYV1 514 aa13.64□□□□□ -0.23
RAPGEF3-201ENST00000389212 ZBTB1Q9Y2K1 713 aa13.64□□□□□ -0.23
RAPGEF3-201ENST00000389212 A0A1B0GVL5 298 aa13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 PCCAP05165 728 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 NAA16Q6N069 864 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 ZBTB38Q8NAP3 1195 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 KIAA1524Q8TCG1 905 aa13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 SOS2Q07890 1332 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 GTF2A1P52655 376 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 BCCIPQ9P287 314 aaKnown RBP eCLIP13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 RCOR1Q9UKL0 485 aa13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 SALL1Q9NSC2 1324 aa13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 CHRM1P11229 460 aaPredicted RBP13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 SLC9C2Q5TAH2 1124 aa13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 CCDC73Q6ZRK6 1079 aa13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 RBM43Q6ZSC3 357 aaKnown RBP13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 NLRP10Q86W26 655 aa13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 TTLL11Q8NHH1 800 aa13.63□□□□□ -0.23
RAPGEF3-201ENST00000389212 APPBP2Q92624 585 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms