RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 EHMT1Q9H9B1 1298 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 CYP26C1Q6V0L0 522 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 THUMPD2Q9BTF0 503 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 RBM5P52756 815 aaKnown RBP eCLIP13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 ARID5AQ03989 594 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 WDR70Q9NW82 654 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 VIRMAQ69YN4 1812 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 MFSD6Q6ZSS7 791 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 RTEL1-TNFRSF6BF6WH68 1400 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 ZNF75DP51815 510 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 MYL5Q02045 173 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 RAB11FIP4Q86YS3 637 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 PLCB1Q9NQ66 1216 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 MTUS1Q9ULD2 1270 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 KDM5AP29375 1690 aaKnown RBP13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 ERCC6LQ2NKX8 1250 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 MUM1Q2TAK8 710 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 CROCCP2Q86T23 111 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 C17orf53Q8N3J3 647 aaPredicted RBP13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 BAIAP2L1Q9UHR4 511 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 F6X3S4 739 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 CCDC170Q8IYT3 715 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 SMC1BQ8NDV3 1235 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 TRIM4Q9C037 500 aa13.98□□□□□ -0.17
SRGAP3-202ENST00000383836 NBPF7P0C2Y1 421 aaPredicted RBP13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 ZNF131P52739 623 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 ZSCAN29Q8IWY8 852 aaPredicted RBP13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 NUF2Q9BZD4 464 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 TBCAO75347 108 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 ZGPATQ8N5A5 531 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 ATF3P18847 181 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 RALGAPBQ86X10 1494 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 ACTN4O43707 911 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 Q6ZUG5 572 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 ZC3H6P61129 1189 aaKnown RBP13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 ZBTB17Q13105 803 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 BRD3Q15059 726 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 ZNF444Q8N0Y2 327 aaPredicted RBP13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 PEX19P40855 299 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 CAVIN4Q5BKX8 364 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 PCDHB15Q9Y5E8 787 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 IL16Q14005 1332 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 BRF1Q92994 677 aa13.97□□□□□ -0.17
SRGAP3-202ENST00000383836 PABPN1LA6NDY0 278 aaKnown RBP13.96□□□□□ -0.17
SRGAP3-202ENST00000383836 TMEM110-MUSTN1A8MSY1 372 aa13.96□□□□□ -0.17
SRGAP3-202ENST00000383836 USP37Q86T82 979 aa13.96□□□□□ -0.17
SRGAP3-202ENST00000383836 SYNCQ9H7C4 482 aa13.96□□□□□ -0.17
SRGAP3-202ENST00000383836 GON4LQ3T8J9 2241 aa13.96□□□□□ -0.17
SRGAP3-202ENST00000383836 ELP1O95163 1332 aa13.96□□□□□ -0.17
SRGAP3-202ENST00000383836 GMNNO75496 209 aa13.96□□□□□ -0.17
SRGAP3-202ENST00000383836 KLF18A0A0U1RQI7 1052 aa13.96□□□□□ -0.17
SRGAP3-202ENST00000383836 CETN3O15182 167 aa13.96□□□□□ -0.18
SRGAP3-202ENST00000383836 BRAPQ7Z569 592 aa13.96□□□□□ -0.18
SRGAP3-202ENST00000383836 TXNDC16Q9P2K2 825 aa13.96□□□□□ -0.18
SRGAP3-202ENST00000383836 IGF1RP08069 1367 aa13.96□□□□□ -0.18
SRGAP3-202ENST00000383836 HMGB2P26583 209 aaKnown RBP13.96□□□□□ -0.18
SRGAP3-202ENST00000383836 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.18
SRGAP3-202ENST00000383836 SSX2IPQ9Y2D8 614 aa13.96□□□□□ -0.18
SRGAP3-202ENST00000383836 SNCBQ16143 134 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 TRIM68Q6AZZ1 485 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 RIPOR2Q9Y4F9 1068 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 ZBTB43O43298 467 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 PDE1AP54750 535 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 VSIG1Q86XK7 387 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 RABEP2Q9H5N1 569 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 PPFIA3O75145 1194 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 TAF7Q15545 349 aaPredicted RBP13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 DDX27Q96GQ7 796 aaKnown RBP13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 EPSTI1Q96J88 318 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 PCF11O94913 1555 aaKnown RBP13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 SEL1L2Q5TEA6 688 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 TPX2Q9ULW0 747 aaKnown RBP13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 ATP6V0A2Q9Y487 856 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 IGSF22Q8N9C0 903 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 BICD1Q96G01 975 aa13.95□□□□□ -0.18
SRGAP3-202ENST00000383836 SMARCC2Q8TAQ2 1214 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 ASIC1P78348 528 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 IFIT5Q13325 482 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 DHX58Q96C10 678 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 HAND2P61296 217 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 FLIIQ13045 1269 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 CCDC85AQ96PX6 553 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 SLC5A1P13866 664 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 AK2P54819 239 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 ERMNQ8TAM6 284 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 ARHGAP45Q92619 1136 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 PSMD1Q99460 953 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 MTMR3Q13615 1198 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 CCDC14Q49A88 953 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 VPS52Q8N1B4 723 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 ERCC3P19447 782 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 PAK2Q13177 524 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 VEZTQ9HBM0 779 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 NAIPQ13075 1403 aa13.94□□□□□ -0.18
SRGAP3-202ENST00000383836 ARL1P40616 181 aaPredicted RBP13.93□□□□□ -0.18
SRGAP3-202ENST00000383836 ARHGAP6O43182 974 aa13.93□□□□□ -0.18
SRGAP3-202ENST00000383836 PPFIA4O75335 1185 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms