RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 FOXP2O15409 715 aa16.87■□□□□ 0.29
CLCN4-201ENST00000380829 ZSCAN22P10073 491 aaPredicted RBP16.87■□□□□ 0.29
CLCN4-201ENST00000380829 C3orf67Q6ZVT6 689 aa16.87■□□□□ 0.29
CLCN4-201ENST00000380829 ZNF512BQ96KM6 892 aaPredicted RBP16.87■□□□□ 0.29
CLCN4-201ENST00000380829 RBM27Q9P2N5 1060 aaKnown RBP16.87■□□□□ 0.29
CLCN4-201ENST00000380829 BTAF1O14981 1849 aa16.87■□□□□ 0.29
CLCN4-201ENST00000380829 ZNF831Q5JPB2 1677 aa16.87■□□□□ 0.29
CLCN4-201ENST00000380829 IDH1O75874 414 aaKnown RBP16.87■□□□□ 0.29
CLCN4-201ENST00000380829 SLC5A1P13866 664 aa16.87■□□□□ 0.29
CLCN4-201ENST00000380829 ARID4AP29374 1257 aaPredicted RBP16.87■□□□□ 0.29
CLCN4-201ENST00000380829 PDE4CQ08493 712 aa16.87■□□□□ 0.29
CLCN4-201ENST00000380829 TBC1D9BQ66K14 1250 aa16.87■□□□□ 0.29
CLCN4-201ENST00000380829 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
CLCN4-201ENST00000380829 COL4A1P02462 1669 aa16.87■□□□□ 0.29
CLCN4-201ENST00000380829 GNPATO15228 680 aa16.86■□□□□ 0.29
CLCN4-201ENST00000380829 SLC9C2Q5TAH2 1124 aa16.86■□□□□ 0.29
CLCN4-201ENST00000380829 GJD4Q96KN9 370 aaPredicted RBP16.86■□□□□ 0.29
CLCN4-201ENST00000380829 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.86■□□□□ 0.29
CLCN4-201ENST00000380829 CCNL1Q9UK58 526 aaPredicted RBP16.86■□□□□ 0.29
CLCN4-201ENST00000380829 NSFL1CQ9UNZ2 370 aaKnown RBP16.86■□□□□ 0.29
CLCN4-201ENST00000380829 E7EWF7 191 aa16.86■□□□□ 0.29
CLCN4-201ENST00000380829 HSP90B1P14625 803 aaKnown RBP16.86■□□□□ 0.29
CLCN4-201ENST00000380829 HSPA1LP34931 641 aa16.86■□□□□ 0.29
CLCN4-201ENST00000380829 HAND2P61296 217 aa16.86■□□□□ 0.29
CLCN4-201ENST00000380829 UTP14CQ5TAP6 766 aaKnown RBP16.86■□□□□ 0.29
CLCN4-201ENST00000380829 BRF1Q92994 677 aa16.86■□□□□ 0.29
CLCN4-201ENST00000380829 BCL2L12Q9HB09 334 aa16.86■□□□□ 0.29
CLCN4-201ENST00000380829 AFF2P51816 1311 aa16.85■□□□□ 0.29
CLCN4-201ENST00000380829 GPAA1O43292 621 aa16.85■□□□□ 0.29
CLCN4-201ENST00000380829 AMIGO3Q86WK7 504 aa16.85■□□□□ 0.29
CLCN4-201ENST00000380829 VPS37CA5D8V6 355 aaPredicted RBP16.85■□□□□ 0.29
CLCN4-201ENST00000380829 F13A1P00488 732 aa16.85■□□□□ 0.29
CLCN4-201ENST00000380829 UQCRFS1P1P0C7P4 283 aa16.85■□□□□ 0.29
CLCN4-201ENST00000380829 ADD2P35612 726 aa16.85■□□□□ 0.29
CLCN4-201ENST00000380829 CHRNDQ07001 517 aa16.85■□□□□ 0.29
CLCN4-201ENST00000380829 TTF1Q15361 905 aaPredicted RBP16.85■□□□□ 0.29
CLCN4-201ENST00000380829 CSPP1Q1MSJ5 1256 aa16.85■□□□□ 0.29
CLCN4-201ENST00000380829 DHX32Q7L7V1 743 aaKnown RBP16.85■□□□□ 0.29
CLCN4-201ENST00000380829 MTMR6Q9Y217 621 aa16.85■□□□□ 0.29
CLCN4-201ENST00000380829 RTL9Q8NET4 1388 aa16.84■□□□□ 0.29
CLCN4-201ENST00000380829 LAMB2P55268 1798 aa16.84■□□□□ 0.29
CLCN4-201ENST00000380829 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
CLCN4-201ENST00000380829 CBX1P83916 185 aa16.84■□□□□ 0.29
CLCN4-201ENST00000380829 RASGRF1Q13972 1273 aa16.84■□□□□ 0.29
CLCN4-201ENST00000380829 CHST3Q7LGC8 479 aa16.84■□□□□ 0.29
CLCN4-201ENST00000380829 WWC3Q9ULE0 1092 aa16.84■□□□□ 0.29
CLCN4-201ENST00000380829 MYO5AQ9Y4I1 1855 aaKnown RBP16.84■□□□□ 0.29
CLCN4-201ENST00000380829 LAMA4Q16363 1823 aa16.84■□□□□ 0.29
CLCN4-201ENST00000380829 MYH7P12883 1935 aa16.84■□□□□ 0.29
CLCN4-201ENST00000380829 RPS6KA4O75676 772 aa16.84■□□□□ 0.29
CLCN4-201ENST00000380829 FGAP02671 866 aa16.84■□□□□ 0.29
CLCN4-201ENST00000380829 HMGB1P09429 215 aaKnown RBP16.84■□□□□ 0.29
CLCN4-201ENST00000380829 SPATA5Q8NB90 893 aa16.84■□□□□ 0.29
CLCN4-201ENST00000380829 NHSQ6T4R5 1651 aa16.83■□□□□ 0.29
CLCN4-201ENST00000380829 BCAMP50895 628 aa16.83■□□□□ 0.28
CLCN4-201ENST00000380829 ZSCAN25Q6NSZ9 544 aa16.83■□□□□ 0.28
CLCN4-201ENST00000380829 BBXQ8WY36 941 aaPredicted RBP16.83■□□□□ 0.28
CLCN4-201ENST00000380829 NARFQ9UHQ1 456 aa16.83■□□□□ 0.28
CLCN4-201ENST00000380829 CNPY2Q9Y2B0 182 aa16.83■□□□□ 0.28
CLCN4-201ENST00000380829 EP400Q96L91 3159 aa16.83■□□□□ 0.28
CLCN4-201ENST00000380829 ZNF532Q9HCE3 1301 aa16.83■□□□□ 0.28
CLCN4-201ENST00000380829 ARAP2Q8WZ64 1704 aa16.83■□□□□ 0.28
CLCN4-201ENST00000380829 RC3H1Q5TC82 1133 aaKnown RBP16.82■□□□□ 0.28
CLCN4-201ENST00000380829 LARP1BQ659C4 914 aaKnown RBP16.82■□□□□ 0.28
CLCN4-201ENST00000380829 GTF3C6Q969F1 213 aa16.82■□□□□ 0.28
CLCN4-201ENST00000380829 CDC5LQ99459 802 aaKnown RBP16.82■□□□□ 0.28
CLCN4-201ENST00000380829 PDE6AP16499 860 aa16.82■□□□□ 0.28
CLCN4-201ENST00000380829 EXOSC10Q01780 885 aaKnown RBP16.82■□□□□ 0.28
CLCN4-201ENST00000380829 IMMTQ16891 758 aaKnown RBP16.82■□□□□ 0.28
CLCN4-201ENST00000380829 USP48Q86UV5 1035 aa16.82■□□□□ 0.28
CLCN4-201ENST00000380829 CCDC24Q8N4L8 307 aa16.82■□□□□ 0.28
CLCN4-201ENST00000380829 CTNNA3Q9UI47 895 aa16.82■□□□□ 0.28
CLCN4-201ENST00000380829 SCN7AQ01118 1682 aa16.82■□□□□ 0.28
CLCN4-201ENST00000380829 JAK2O60674 1132 aa16.81■□□□□ 0.28
CLCN4-201ENST00000380829 ZPR1O75312 459 aa16.81■□□□□ 0.28
CLCN4-201ENST00000380829 APOBRQ0VD83 1088 aa16.81■□□□□ 0.28
CLCN4-201ENST00000380829 ZNF710Q8N1W2 664 aa16.81■□□□□ 0.28
CLCN4-201ENST00000380829 RTCBQ9Y3I0 505 aaKnown RBP16.81■□□□□ 0.28
CLCN4-201ENST00000380829 TCHHQ07283 1943 aa16.81■□□□□ 0.28
CLCN4-201ENST00000380829 TAF1P21675 1872 aa16.81■□□□□ 0.28
CLCN4-201ENST00000380829 WTIPA6NIX2 430 aaPredicted RBP16.81■□□□□ 0.28
CLCN4-201ENST00000380829 GADD45BO75293 160 aaPredicted RBP16.81■□□□□ 0.28
CLCN4-201ENST00000380829 ANKRD18AQ8IVF6 992 aa16.81■□□□□ 0.28
CLCN4-201ENST00000380829 RNF214Q8ND24 703 aa16.81■□□□□ 0.28
CLCN4-201ENST00000380829 SCRN1Q12765 414 aa16.8■□□□□ 0.28
CLCN4-201ENST00000380829 UBE3CQ15386 1083 aa16.8■□□□□ 0.28
CLCN4-201ENST00000380829 SF3B3Q15393 1217 aaKnown RBP16.8■□□□□ 0.28
CLCN4-201ENST00000380829 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
CLCN4-201ENST00000380829 CDC37L1Q7L3B6 337 aa16.8■□□□□ 0.28
CLCN4-201ENST00000380829 SEPT12Q8IYM1 358 aa16.8■□□□□ 0.28
CLCN4-201ENST00000380829 SETDB2Q96T68 719 aa16.8■□□□□ 0.28
CLCN4-201ENST00000380829 TMEM63CQ9P1W3 806 aa16.8■□□□□ 0.28
CLCN4-201ENST00000380829 IQSEC3Q9UPP2 1182 aaPredicted RBP16.8■□□□□ 0.28
CLCN4-201ENST00000380829 PHF14O94880 888 aa16.8■□□□□ 0.28
CLCN4-201ENST00000380829 PPP4R3BQ5MIZ7 849 aa16.8■□□□□ 0.28
CLCN4-201ENST00000380829 NBPF5PQ86XG9 351 aaPredicted RBP16.8■□□□□ 0.28
CLCN4-201ENST00000380829 MPNDQ8N594 471 aa16.8■□□□□ 0.28
CLCN4-201ENST00000380829 ARHGEF1Q92888 912 aaKnown RBP16.8■□□□□ 0.28
CLCN4-201ENST00000380829 TCRBV5S4A2TA0A5A2 114 aa16.79■□□□□ 0.28
CLCN4-201ENST00000380829 SYCE3A1L190 88 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms