RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 WDR78Q5VTH9 848 aa17.19■□□□□ 0.34
NPHP4-201ENST00000378156 OGFOD1Q8N543 542 aa17.19■□□□□ 0.34
NPHP4-201ENST00000378156 ANTXR1Q9H6X2 564 aa17.19■□□□□ 0.34
NPHP4-201ENST00000378156 ITGA6P23229 1130 aa17.19■□□□□ 0.34
NPHP4-201ENST00000378156 TNNI3KQ59H18 835 aa17.19■□□□□ 0.34
NPHP4-201ENST00000378156 FPGT-TNNI3KV9GXZ4 949 aa17.19■□□□□ 0.34
NPHP4-201ENST00000378156 PTGS1P23219 599 aa17.19■□□□□ 0.34
NPHP4-201ENST00000378156 TTLL12Q14166 644 aaPredicted RBP17.19■□□□□ 0.34
NPHP4-201ENST00000378156 SPA17Q15506 151 aa17.19■□□□□ 0.34
NPHP4-201ENST00000378156 BRD1O95696 1058 aa17.18■□□□□ 0.34
NPHP4-201ENST00000378156 GCKRQ14397 625 aa17.18■□□□□ 0.34
NPHP4-201ENST00000378156 ENOX2Q16206 610 aaKnown RBP17.18■□□□□ 0.34
NPHP4-201ENST00000378156 DNAJC10Q8IXB1 793 aa17.18■□□□□ 0.34
NPHP4-201ENST00000378156 SIRT2Q8IXJ6 389 aa17.18■□□□□ 0.34
NPHP4-201ENST00000378156 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
NPHP4-201ENST00000378156 SSH3Q8TE77 659 aa17.18■□□□□ 0.34
NPHP4-201ENST00000378156 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
NPHP4-201ENST00000378156 MCM9Q9NXL9 1143 aa17.18■□□□□ 0.34
NPHP4-201ENST00000378156 EZRP15311 586 aaKnown RBP17.18■□□□□ 0.34
NPHP4-201ENST00000378156 TAF4BQ92750 862 aa17.18■□□□□ 0.34
NPHP4-201ENST00000378156 SPTLC2O15270 562 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 KIF5CO60282 957 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 PLCG2P16885 1265 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 JAKMIP3Q5VZ66 844 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 TAX1BP1Q86VP1 789 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 GAS2L3Q86XJ1 694 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 HELLSQ9NRZ9 838 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 MLH3Q9UHC1 1453 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 POTEB2H3BUK9 544 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 CASQ1P31415 396 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 PICALMQ13492 652 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 KIF4BQ2VIQ3 1234 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 PDE8AO60658 829 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 FAM135BQ49AJ0 1406 aa17.17■□□□□ 0.34
NPHP4-201ENST00000378156 HDAC9Q9UKV0 1011 aa17.16■□□□□ 0.34
NPHP4-201ENST00000378156 ZNF853P0CG23 659 aa17.16■□□□□ 0.34
NPHP4-201ENST00000378156 CCNL1Q9UK58 526 aaPredicted RBP17.16■□□□□ 0.34
NPHP4-201ENST00000378156 UBASH3AP57075 661 aa17.16■□□□□ 0.34
NPHP4-201ENST00000378156 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
NPHP4-201ENST00000378156 LDHBP07195 334 aaKnown RBP17.16■□□□□ 0.34
NPHP4-201ENST00000378156 MTIF2P46199 727 aaKnown RBP17.16■□□□□ 0.34
NPHP4-201ENST00000378156 WDHD1O75717 1129 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-201ENST00000378156 CALM1P0DP23 149 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 CALM2P0DP24 149 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 CALM3P0DP25 149 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 MICALCLQ6ZW33 695 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 RXRAP19793 462 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 LMOD1P29536 600 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-201ENST00000378156 PPP4R3AQ6IN85 833 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 PARP3Q9Y6F1 533 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 IQGAP3Q86VI3 1631 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 GIGYF1O75420 1035 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-201ENST00000378156 TRAF1Q13077 416 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 CCDC150Q8NCX0 1101 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 EDC3Q96F86 508 aaKnown RBP17.15■□□□□ 0.34
NPHP4-201ENST00000378156 ZNF594Q96JF6 807 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-201ENST00000378156 NUP88Q99567 741 aaPredicted RBP17.15■□□□□ 0.34
NPHP4-201ENST00000378156 PAXBP1Q9Y5B6 917 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 VPS36Q86VN1 386 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 FBXO3Q9UK99 471 aa17.15■□□□□ 0.34
NPHP4-201ENST00000378156 CFAP74Q9C0B2 1584 aa17.14■□□□□ 0.33
NPHP4-201ENST00000378156 BMS1Q14692 1282 aaKnown RBP17.14■□□□□ 0.33
NPHP4-201ENST00000378156 HEATR3Q7Z4Q2 680 aa17.14■□□□□ 0.33
NPHP4-201ENST00000378156 ERVV-2B6SEH9 535 aa17.14■□□□□ 0.33
NPHP4-201ENST00000378156 PUM3Q15397 648 aaKnown RBP17.14■□□□□ 0.33
NPHP4-201ENST00000378156 CNBD1Q8NA66 436 aa17.14■□□□□ 0.33
NPHP4-201ENST00000378156 MBD4O95243 580 aa17.14■□□□□ 0.33
NPHP4-201ENST00000378156 DYDC1Q8WWB3 177 aa17.14■□□□□ 0.33
NPHP4-201ENST00000378156 NCOA5Q9HCD5 579 aaKnown RBP17.14■□□□□ 0.33
NPHP4-201ENST00000378156 DENND2AQ9ULE3 1009 aa17.14■□□□□ 0.33
NPHP4-201ENST00000378156 YEATS4O95619 227 aa17.13■□□□□ 0.33
NPHP4-201ENST00000378156 XAGE2Q96GT9 111 aa17.13■□□□□ 0.33
NPHP4-201ENST00000378156 ZMYND15Q9H091 742 aa17.13■□□□□ 0.33
NPHP4-201ENST00000378156 CCDC87Q9NVE4 849 aa17.13■□□□□ 0.33
NPHP4-201ENST00000378156 ADCY10Q96PN6 1610 aa17.13■□□□□ 0.33
NPHP4-201ENST00000378156 TRIM75PA6NK02 468 aa17.13■□□□□ 0.33
NPHP4-201ENST00000378156 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
NPHP4-201ENST00000378156 ERCC6L2Q5T890 1561 aa17.13■□□□□ 0.33
NPHP4-201ENST00000378156 GOLGA6L9A6NEM1 432 aa17.13■□□□□ 0.33
NPHP4-201ENST00000378156 TRMT1LQ7Z2T5 733 aaKnown RBP17.13■□□□□ 0.33
NPHP4-201ENST00000378156 PAF1Q8N7H5 531 aa17.13■□□□□ 0.33
NPHP4-201ENST00000378156 LRRC27Q9C0I9 530 aa17.13■□□□□ 0.33
NPHP4-201ENST00000378156 IBTKQ9P2D0 1353 aaPredicted RBP17.13■□□□□ 0.33
NPHP4-201ENST00000378156 POTEJP0CG39 1038 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 PTH1RQ03431 593 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 CDC37L1Q7L3B6 337 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 JAG2Q9Y219 1238 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 PLEKHG1Q9ULL1 1385 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 EFCAB6Q5THR3 1501 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 A0A1B0GVL5 298 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 CALML3P27482 149 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 AFMP43652 599 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
NPHP4-201ENST00000378156 EYA3Q99504 573 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 ZCCHC11Q5TAX3 1644 aaKnown RBP17.12■□□□□ 0.33
NPHP4-201ENST00000378156 RTL9Q8NET4 1388 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 PHKG2P15735 406 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 NAPAP54920 295 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 GNG11P61952 73 aa17.12■□□□□ 0.33
NPHP4-201ENST00000378156 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms