RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 LPIN2Q92539 896 aa22.68■■□□□ 1.22
PCDHA4-201ENST00000378125 AGXT2Q9BYV1 514 aa22.68■■□□□ 1.22
PCDHA4-201ENST00000378125 ZNF213O14771 459 aa22.67■■□□□ 1.22
PCDHA4-201ENST00000378125 RESTQ13127 1097 aa22.67■■□□□ 1.22
PCDHA4-201ENST00000378125 PDLIM2Q96JY6 352 aa22.67■■□□□ 1.22
PCDHA4-201ENST00000378125 PRC1O43663 620 aa22.66■■□□□ 1.22
PCDHA4-201ENST00000378125 PDIA4P13667 645 aaKnown RBP22.66■■□□□ 1.22
PCDHA4-201ENST00000378125 LEO1Q8WVC0 666 aaPredicted RBP22.66■■□□□ 1.22
PCDHA4-201ENST00000378125 MYH14Q7Z406 1995 aaKnown RBP22.66■■□□□ 1.22
PCDHA4-201ENST00000378125 MROH5Q6ZUA9 1318 aa22.66■■□□□ 1.22
PCDHA4-201ENST00000378125 GOLGA6L4A6NEF3 574 aa22.66■■□□□ 1.22
PCDHA4-201ENST00000378125 NKX2-3Q8TAU0 364 aa22.66■■□□□ 1.22
PCDHA4-201ENST00000378125 FGFR2P21802 821 aa22.65■■□□□ 1.22
PCDHA4-201ENST00000378125 TTF1Q15361 905 aaPredicted RBP22.65■■□□□ 1.22
PCDHA4-201ENST00000378125 LTBP4Q8N2S1 1624 aa22.65■■□□□ 1.22
PCDHA4-201ENST00000378125 ABCC12Q96J65 1359 aa22.65■■□□□ 1.22
PCDHA4-201ENST00000378125 PDE6AP16499 860 aa22.65■■□□□ 1.22
PCDHA4-201ENST00000378125 ZSCAN25Q6NSZ9 544 aa22.65■■□□□ 1.22
PCDHA4-201ENST00000378125 LLPHQ9BRT6 129 aaKnown RBP22.65■■□□□ 1.22
PCDHA4-201ENST00000378125 FTOQ9C0B1 505 aaKnown RBP eCLIP22.65■■□□□ 1.22
PCDHA4-201ENST00000378125 SCAND2PQ9GZW5 306 aaPredicted RBP22.65■■□□□ 1.22
PCDHA4-201ENST00000378125 LETM1O95202 739 aaPredicted RBP22.64■■□□□ 1.22
PCDHA4-201ENST00000378125 SLC5A1P13866 664 aa22.64■■□□□ 1.22
PCDHA4-201ENST00000378125 ARID4AP29374 1257 aaPredicted RBP22.64■■□□□ 1.22
PCDHA4-201ENST00000378125 BICDL1Q6ZP65 573 aa22.64■■□□□ 1.22
PCDHA4-201ENST00000378125 PTF1AQ7RTS3 328 aa22.64■■□□□ 1.22
PCDHA4-201ENST00000378125 RALYLQ86SE5 291 aaKnown RBP22.64■■□□□ 1.22
PCDHA4-201ENST00000378125 MPNDQ8N594 471 aa22.64■■□□□ 1.22
PCDHA4-201ENST00000378125 TAOK2Q9UL54 1235 aa22.64■■□□□ 1.22
PCDHA4-201ENST00000378125 MYH7P12883 1935 aa22.64■■□□□ 1.21
PCDHA4-201ENST00000378125 NTSR2O95665 410 aa22.64■■□□□ 1.21
PCDHA4-201ENST00000378125 ANTXR2P58335 489 aa22.64■■□□□ 1.21
PCDHA4-201ENST00000378125 RASGRF1Q13972 1273 aa22.64■■□□□ 1.21
PCDHA4-201ENST00000378125 MB21D2Q8IYB1 491 aaPredicted RBP22.64■■□□□ 1.21
PCDHA4-201ENST00000378125 SPATA5Q8NB90 893 aa22.64■■□□□ 1.21
PCDHA4-201ENST00000378125 ZNF274Q96GC6 653 aaPredicted RBP22.64■■□□□ 1.21
PCDHA4-201ENST00000378125 ZNF512BQ96KM6 892 aaPredicted RBP22.64■■□□□ 1.21
PCDHA4-201ENST00000378125 C8orf37Q96NL8 207 aa22.64■■□□□ 1.21
PCDHA4-201ENST00000378125 KLF18A0A0U1RQI7 1052 aa22.63■■□□□ 1.21
PCDHA4-201ENST00000378125 MCM5P33992 734 aa22.63■■□□□ 1.21
PCDHA4-201ENST00000378125 BCAMP50895 628 aa22.63■■□□□ 1.21
PCDHA4-201ENST00000378125 NCOA7Q8NI08 942 aa22.63■■□□□ 1.21
PCDHA4-201ENST00000378125 NBPF3Q9H094 633 aa22.63■■□□□ 1.21
PCDHA4-201ENST00000378125 IQSEC3Q9UPP2 1182 aaPredicted RBP22.63■■□□□ 1.21
PCDHA4-201ENST00000378125 UQCRFS1P1P0C7P4 283 aa22.63■■□□□ 1.21
PCDHA4-201ENST00000378125 CCDC152Q4G0S7 254 aa22.63■■□□□ 1.21
PCDHA4-201ENST00000378125 MAGEB6Q8N7X4 407 aa22.63■■□□□ 1.21
PCDHA4-201ENST00000378125 INCENPQ9NQS7 918 aa22.63■■□□□ 1.21
PCDHA4-201ENST00000378125 ELP1O95163 1332 aa22.62■■□□□ 1.21
PCDHA4-201ENST00000378125 OTUD7BQ6GQQ9 843 aa22.62■■□□□ 1.21
PCDHA4-201ENST00000378125 ZSCAN30Q86W11 494 aa22.62■■□□□ 1.21
PCDHA4-201ENST00000378125 PGBD1Q96JS3 809 aa22.62■■□□□ 1.21
PCDHA4-201ENST00000378125 DACT1Q9NYF0 836 aa22.62■■□□□ 1.21
PCDHA4-201ENST00000378125 IGHMBP2P38935 993 aaKnown RBP22.62■■□□□ 1.21
PCDHA4-201ENST00000378125 PARP10Q53GL7 1025 aa22.62■■□□□ 1.21
PCDHA4-201ENST00000378125 TBC1D10CQ8IV04 446 aa22.62■■□□□ 1.21
PCDHA4-201ENST00000378125 AIDAQ96BJ3 306 aa22.62■■□□□ 1.21
PCDHA4-201ENST00000378125 USP25Q9UHP3 1055 aa22.62■■□□□ 1.21
PCDHA4-201ENST00000378125 WTIPA6NIX2 430 aaPredicted RBP22.61■■□□□ 1.21
PCDHA4-201ENST00000378125 GOLGA8BA8MQT2 603 aa22.61■■□□□ 1.21
PCDHA4-201ENST00000378125 HMGN5P82970 282 aaKnown RBP22.61■■□□□ 1.21
PCDHA4-201ENST00000378125 BARGINQ6ZT62 677 aa22.61■■□□□ 1.21
PCDHA4-201ENST00000378125 CKAP2LQ8IYA6 745 aa22.61■■□□□ 1.21
PCDHA4-201ENST00000378125 LINC00116Q8NCU8 138 aa22.61■■□□□ 1.21
PCDHA4-201ENST00000378125 BICD2Q8TD16 824 aa22.61■■□□□ 1.21
PCDHA4-201ENST00000378125 AK7Q96M32 723 aa22.61■■□□□ 1.21
PCDHA4-201ENST00000378125 FDPSP14324 419 aaKnown RBP22.6■■□□□ 1.21
PCDHA4-201ENST00000378125 PLCB2Q00722 1185 aa22.6■■□□□ 1.21
PCDHA4-201ENST00000378125 UBE3CQ15386 1083 aa22.6■■□□□ 1.21
PCDHA4-201ENST00000378125 TCRBV5S4A2TA0A5A2 114 aa22.6■■□□□ 1.21
PCDHA4-201ENST00000378125 MSNP26038 577 aaKnown RBP22.6■■□□□ 1.21
PCDHA4-201ENST00000378125 FAM182BQ5T319 152 aa22.6■■□□□ 1.21
PCDHA4-201ENST00000378125 C3orf67Q6ZVT6 689 aa22.6■■□□□ 1.21
PCDHA4-201ENST00000378125 FUCA2Q9BTY2 467 aa22.6■■□□□ 1.21
PCDHA4-201ENST00000378125 ZSCAN16Q9H4T2 348 aaPredicted RBP22.6■■□□□ 1.21
PCDHA4-201ENST00000378125 SALL1Q9NSC2 1324 aa22.6■■□□□ 1.21
PCDHA4-201ENST00000378125 CHRNDQ07001 517 aa22.59■■□□□ 1.21
PCDHA4-201ENST00000378125 ERFEQ4G0M1 354 aa22.59■■□□□ 1.21
PCDHA4-201ENST00000378125 NGLY1Q96IV0 654 aa22.59■■□□□ 1.21
PCDHA4-201ENST00000378125 NUP62CLQ9H1M0 184 aa22.59■■□□□ 1.21
PCDHA4-201ENST00000378125 RXRAP19793 462 aa22.59■■□□□ 1.21
PCDHA4-201ENST00000378125 CYB5R4Q7L1T6 521 aa22.59■■□□□ 1.21
PCDHA4-201ENST00000378125 STK11IPQ8N1F8 1099 aa22.59■■□□□ 1.21
PCDHA4-201ENST00000378125 ARMT1Q9H993 441 aa22.59■■□□□ 1.21
PCDHA4-201ENST00000378125 GJB4Q9NTQ9 266 aa22.59■■□□□ 1.21
PCDHA4-201ENST00000378125 CARMIL3Q8ND23 1372 aa22.59■■□□□ 1.21
PCDHA4-201ENST00000378125 COL4A1P02462 1669 aa22.58■■□□□ 1.21
PCDHA4-201ENST00000378125 KDM4AO75164 1064 aa22.58■■□□□ 1.21
PCDHA4-201ENST00000378125 NR1I2O75469 434 aa22.58■■□□□ 1.21
PCDHA4-201ENST00000378125 TRDNQ13061 729 aa22.58■■□□□ 1.21
PCDHA4-201ENST00000378125 HPS5Q9UPZ3 1129 aa22.58■■□□□ 1.21
PCDHA4-201ENST00000378125 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.58■■□□□ 1.2
PCDHA4-201ENST00000378125 B4E1Z4 1266 aa22.58■■□□□ 1.2
PCDHA4-201ENST00000378125 MBD4O95243 580 aa22.58■■□□□ 1.2
PCDHA4-201ENST00000378125 NAA16Q6N069 864 aaPredicted RBP22.58■■□□□ 1.2
PCDHA4-201ENST00000378125 SMARCC1Q92922 1105 aaPredicted RBP22.58■■□□□ 1.2
PCDHA4-201ENST00000378125 STRBPQ96SI9 672 aaKnown RBP22.58■■□□□ 1.2
PCDHA4-201ENST00000378125 DDX60Q8IY21 1712 aaKnown RBP22.58■■□□□ 1.2
PCDHA4-201ENST00000378125 LRP5O75197 1615 aa22.57■■□□□ 1.2
PCDHA4-201ENST00000378125 ADD1P35611 737 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms