RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 DIP2CQ9Y2E4 1556 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 HMGB1P09429 215 aaKnown RBP16.59■□□□□ 0.25
PHTF1-204ENST00000369604 GTF2A1P52655 376 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-204ENST00000369604 PROSER3Q2NL68 480 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 MCMDC2Q4G0Z9 681 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 NOM1Q5C9Z4 860 aaKnown RBP16.59■□□□□ 0.25
PHTF1-204ENST00000369604 KSR2Q6VAB6 950 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 STOX1Q6ZVD7 989 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 ILDR1Q86SU0 546 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-204ENST00000369604 CCDC12Q8WUD4 166 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-204ENST00000369604 NEO1Q92859 1461 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 A0A1W2PQ27 194 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 A0A1W2PQ64 194 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 A0A1W2PQD8 194 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 VWA3AA6NCI4 1184 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 MARCKSP29966 332 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-204ENST00000369604 ACTN2P35609 894 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 SRLQ86TD4 932 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 C8orf76Q96K31 380 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 FUT8Q9BYC5 575 aa16.59■□□□□ 0.25
PHTF1-204ENST00000369604 ARHGAP6O43182 974 aa16.58■□□□□ 0.25
PHTF1-204ENST00000369604 UBXN6Q9BZV1 441 aa16.58■□□□□ 0.25
PHTF1-204ENST00000369604 A2ML1A8K2U0 1454 aa16.58■□□□□ 0.25
PHTF1-204ENST00000369604 DHX16O60231 1041 aaKnown RBP16.58■□□□□ 0.24
PHTF1-204ENST00000369604 OLFM4Q6UX06 510 aa16.58■□□□□ 0.24
PHTF1-204ENST00000369604 RABGGTAQ92696 567 aa16.58■□□□□ 0.24
PHTF1-204ENST00000369604 BAG1Q99933 345 aaPredicted RBP16.58■□□□□ 0.24
PHTF1-204ENST00000369604 H3BQF6 201 aa16.58■□□□□ 0.24
PHTF1-204ENST00000369604 MYL5Q02045 173 aa16.58■□□□□ 0.24
PHTF1-204ENST00000369604 DHX58Q96C10 678 aa16.58■□□□□ 0.24
PHTF1-204ENST00000369604 PDE11AQ9HCR9 933 aa16.58■□□□□ 0.24
PHTF1-204ENST00000369604 PUF60Q9UHX1 559 aaKnown RBP16.58■□□□□ 0.24
PHTF1-204ENST00000369604 ITSN1Q15811 1721 aa16.57■□□□□ 0.24
PHTF1-204ENST00000369604 HOXC9P31274 260 aa16.57■□□□□ 0.24
PHTF1-204ENST00000369604 MAP3K9P80192 1104 aa16.57■□□□□ 0.24
PHTF1-204ENST00000369604 RAB11FIP4Q86YS3 637 aa16.57■□□□□ 0.24
PHTF1-204ENST00000369604 PFKFB1P16118 471 aa16.57■□□□□ 0.24
PHTF1-204ENST00000369604 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
PHTF1-204ENST00000369604 DESI2Q9BSY9 194 aa16.57■□□□□ 0.24
PHTF1-204ENST00000369604 COL15A1P39059 1388 aa16.57■□□□□ 0.24
PHTF1-204ENST00000369604 MPRIPQ6WCQ1 1025 aa16.57■□□□□ 0.24
PHTF1-204ENST00000369604 PDIA3P30101 505 aaKnown RBP16.56■□□□□ 0.24
PHTF1-204ENST00000369604 SYKP43405 635 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 FANCLQ9NW38 375 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 MRFAP1Q9Y605 127 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
PHTF1-204ENST00000369604 CACNA1FO60840 1977 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 ROBO2Q9HCK4 1378 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 SPATA31D1Q6ZQQ2 1576 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 GOLGA6L9A6NEM1 432 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 IKBKBO14920 756 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 TXLNAP40222 546 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 ADKP55263 362 aaKnown RBP16.56■□□□□ 0.24
PHTF1-204ENST00000369604 SKIDA1Q1XH10 827 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 JAKMIP3Q5VZ66 844 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 RIC3Q7Z5B4 369 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 VSTM4Q8IW00 320 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 CARMIL3Q8ND23 1372 aa16.56■□□□□ 0.24
PHTF1-204ENST00000369604 PHACTR2O75167 634 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 IVLP07476 585 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 TAF7LQ5H9L4 462 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 LINS1Q8NG48 757 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 CCDC102AQ96A19 550 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 GJB4Q9NTQ9 266 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 CPLX1O14810 134 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 HOXB7P09629 217 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 TOGARAM2Q6ZUX3 1019 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 KAZALD1Q96I82 304 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 DBNLQ9UJU6 430 aaKnown RBP16.55■□□□□ 0.24
PHTF1-204ENST00000369604 SIRT1Q96EB6 747 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 TOMM22Q9NS69 142 aa16.55■□□□□ 0.24
PHTF1-204ENST00000369604 CCDC151A5D8V7 595 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 EIF3JO75822 258 aaKnown RBP16.54■□□□□ 0.24
PHTF1-204ENST00000369604 DDX58O95786 925 aaKnown RBP16.54■□□□□ 0.24
PHTF1-204ENST00000369604 CHMP4BP1P59074 171 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 PNOCQ13519 176 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 HSP90B2PQ58FF3 399 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 FCHSD1Q86WN1 690 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 LZTFL1Q9NQ48 299 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 ANKRD65E5RJM6 399 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 YEATS4O95619 227 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 ATP5JP18859 108 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 NOP2P46087 812 aaKnown RBP16.54■□□□□ 0.24
PHTF1-204ENST00000369604 TFCP2Q12800 502 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 MYSM1Q5VVJ2 828 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 RSRC2Q7L4I2 434 aaKnown RBP16.54■□□□□ 0.24
PHTF1-204ENST00000369604 RGPD1P0DJD0 1748 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 CRYBG1Q9Y4K1 1723 aa16.54■□□□□ 0.24
PHTF1-204ENST00000369604 SETD1AO15047 1707 aaKnown RBP16.53■□□□□ 0.24
PHTF1-204ENST00000369604 TTC31Q49AM3 519 aaPredicted RBP16.53■□□□□ 0.24
PHTF1-204ENST00000369604 CTR9Q6PD62 1173 aa16.53■□□□□ 0.24
PHTF1-204ENST00000369604 IRX2Q9BZI1 471 aaPredicted RBP16.53■□□□□ 0.24
PHTF1-204ENST00000369604 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
PHTF1-204ENST00000369604 A0A1B0GUL7 405 aa16.53■□□□□ 0.24
PHTF1-204ENST00000369604 BRD3Q15059 726 aa16.53■□□□□ 0.24
PHTF1-204ENST00000369604 ANO1Q5XXA6 986 aa16.53■□□□□ 0.24
PHTF1-204ENST00000369604 PAXIP1Q6ZW49 1069 aaPredicted RBP16.53■□□□□ 0.24
PHTF1-204ENST00000369604 HDXQ7Z353 690 aa16.53■□□□□ 0.24
PHTF1-204ENST00000369604 DBNDD2Q9BQY9 259 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 372.9 ms