RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 NCAPHQ15003 741 aa12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 DPCR1Q3MIW9 517 aa12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 REXO1L1PQ8IX06 675 aa12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 SDF4Q9BRK5 362 aa12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 FTOQ9C0B1 505 aaKnown RBP eCLIP12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 COL15A1P39059 1388 aa12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 SMC1AQ14683 1233 aaKnown RBP12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 ZSCAN26Q16670 478 aa12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 CTR9Q6PD62 1173 aa12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 CARD6Q9BX69 1037 aa12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 PCDHA7Q9UN72 937 aa12.18□□□□□ -0.46
LYSMD1-201ENST00000368908 SASH3O75995 380 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 URI1O94763 535 aaPredicted RBP12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 CTDNEP1O95476 244 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 YEATS4O95619 227 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 EIF2S2P20042 333 aaKnown RBP12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 FANCCQ00597 558 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 RSRC2Q7L4I2 434 aaKnown RBP12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 MSL3Q8N5Y2 521 aaKnown RBP12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 NFATC2IPQ8NCF5 419 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 FBXO18Q8NFZ0 1043 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 KCNG4Q8TDN1 519 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 RABGGTAQ92696 567 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 BOLA2Q9H3K6 86 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 DBF4Q9UBU7 674 aaPredicted RBP12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 A0A087WWV3 80 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 SEC31AO94979 1220 aaKnown RBP12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 HOXC9P31274 260 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 ST5P78524 1137 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 GORABQ5T7V8 394 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 ABTB2Q8N961 1025 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 CCDC8Q9H0W5 538 aaPredicted RBP12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 ARFGAP3Q9NP61 516 aa12.17□□□□□ -0.46
LYSMD1-201ENST00000368908 OVOS2A0A0G2JMS6 1433 aa12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 ZNF609O15014 1411 aa12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 TAF7LQ5H9L4 462 aa12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 KSR2Q6VAB6 950 aa12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 TLR7Q9NYK1 1049 aaKnown RBP12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 ARHGAP6O43182 974 aa12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 SLC3A2P08195 630 aaKnown RBP12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 CYP21A2P08686 494 aa12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 ATP5JP18859 108 aa12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 MAP3K9P80192 1104 aa12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 DHX32Q7L7V1 743 aaKnown RBP12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 TICAM2Q86XR7 235 aa12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 MRFAP1Q9Y605 127 aa12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 COL14A1Q05707 1796 aaKnown RBP12.16□□□□□ -0.46
LYSMD1-201ENST00000368908 MYO1CO00159 1063 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 FANCGO15287 622 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 NDUFA8P51970 172 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 LINC00301Q8NCQ3 95 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 CCDC191Q8NCU4 936 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 RGS22Q8NE09 1264 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 TRERF1Q96PN7 1200 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 FUT8Q9BYC5 575 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 ATG3Q9NT62 314 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 POLR3EQ9NVU0 708 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 MAP3K2Q9Y2U5 619 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 NWD2Q9ULI1 1742 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 CARMIL3Q8ND23 1372 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 CCDC151A5D8V7 595 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 VWA3AA6NCI4 1184 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 GRM8O00222 908 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 BRD3Q15059 726 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 LMOD2Q6P5Q4 547 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 VSTM4Q8IW00 320 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 LINS1Q8NG48 757 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 ZNF274Q96GC6 653 aaPredicted RBP12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 SUCLG2Q96I99 432 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 YY1AP1Q9H869 796 aa12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.15□□□□□ -0.46
LYSMD1-201ENST00000368908 NFAT5O94916 1531 aa12.15□□□□□ -0.47
LYSMD1-201ENST00000368908 SH3TC1Q8TE82 1336 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 CPDO75976 1380 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 DDX60Q8IY21 1712 aaKnown RBP12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 A0A1B0GVL5 298 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 RPS6KA5O75582 802 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 CASQ1P31415 396 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 EXOSC10Q01780 885 aaKnown RBP12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 PPP2R3AQ06190 1150 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 SRLQ86TD4 932 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 SYTL4Q96C24 671 aaPredicted RBP12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 KAZALD1Q96I82 304 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 LTN1O94822 1766 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 MAP2K7O14733 419 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 IVLP07476 585 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 NLRP6P59044 892 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 MCMDC2Q4G0Z9 681 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 TMEM139Q8IV31 216 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 FBXL16Q8N461 479 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 GOLGA1Q92805 767 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 HSD3B7Q9H2F3 369 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 PPP2R2CQ9Y2T4 447 aa12.14□□□□□ -0.47
LYSMD1-201ENST00000368908 PLCH1Q4KWH8 1693 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 ACTN2P35609 894 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 STK38Q15208 465 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 STOX1Q6ZVD7 989 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 BRAPQ7Z569 592 aa12.13□□□□□ -0.47
LYSMD1-201ENST00000368908 KCNH5Q8NCM2 988 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms