RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 EN1Q05925 392 aaPredicted RBP12.65□□□□□ -0.38
TPM3-212ENST00000368533 RASGRF1Q13972 1273 aa12.65□□□□□ -0.38
TPM3-212ENST00000368533 GPR108Q9NPR9 543 aa12.65□□□□□ -0.38
TPM3-212ENST00000368533 C4BP0C0L5 1744 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 SLC5A1P13866 664 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 MCMDC2Q4G0Z9 681 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 SLC9C2Q5TAH2 1124 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 CDC5LQ99459 802 aaKnown RBP12.64□□□□□ -0.39
TPM3-212ENST00000368533 MAST3O60307 1309 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 SLC27A2O14975 620 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 PDIA4P13667 645 aaKnown RBP12.64□□□□□ -0.39
TPM3-212ENST00000368533 ZSCAN23Q3MJ62 389 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 VPS37DQ86XT2 251 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 LPIN2Q92539 896 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 ZDHHC9Q9Y397 364 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 LARGE1O95461 756 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 AK2P54819 239 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 STK3Q13188 491 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 RBSNQ9H1K0 784 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 HMG20BQ9P0W2 317 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 MINPP1Q9UNW1 487 aa12.64□□□□□ -0.39
TPM3-212ENST00000368533 DDX60Q8IY21 1712 aaKnown RBP12.63□□□□□ -0.39
TPM3-212ENST00000368533 SPDYE4A6NLX3 237 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 HIP1O00291 1037 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 APPP05067 770 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 MCM2P49736 904 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 CHAF1AQ13111 956 aaPredicted RBP12.63□□□□□ -0.39
TPM3-212ENST00000368533 PRR5LQ6MZQ0 368 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 OLFM4Q6UX06 510 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
TPM3-212ENST00000368533 MROH5Q6ZUA9 1318 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 CARMIL3Q8ND23 1372 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 RNF113AO15541 343 aaKnown RBP12.63□□□□□ -0.39
TPM3-212ENST00000368533 SERPINB2P05120 415 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 RPS8P62241 208 aaKnown RBP12.63□□□□□ -0.39
TPM3-212ENST00000368533 TXNRD3Q86VQ6 643 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 NECAB1Q8N987 351 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 MIGA1Q8NAN2 632 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 MAP4K1Q92918 833 aa12.63□□□□□ -0.39
TPM3-212ENST00000368533 PDGFDQ9GZP0 370 aaPredicted RBP12.63□□□□□ -0.39
TPM3-212ENST00000368533 ZKSCAN1P17029 563 aaPredicted RBP12.62□□□□□ -0.39
TPM3-212ENST00000368533 DDR1Q08345 913 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 NECTIN1Q15223 517 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 CLEC17AQ6ZS10 378 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 COL23A1Q86Y22 540 aaPredicted RBP12.62□□□□□ -0.39
TPM3-212ENST00000368533 CCDC94Q9BW85 323 aaPredicted RBP12.62□□□□□ -0.39
TPM3-212ENST00000368533 NYXQ9GZU5 481 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 GDPD2Q9HCC8 539 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 ANKIB1Q9P2G1 1089 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 TAF1LQ8IZX4 1826 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 MYO5AQ9Y4I1 1855 aaKnown RBP12.62□□□□□ -0.39
TPM3-212ENST00000368533 EZH2Q15910 746 aaKnown RBP12.62□□□□□ -0.39
TPM3-212ENST00000368533 DEFB132Q7Z7B7 95 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 MED23Q9ULK4 1368 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 SYCE3A1L190 88 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 FGFR2P21802 821 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 SLC4A8Q2Y0W8 1093 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 DNTTIP2Q5QJE6 756 aaKnown RBP12.62□□□□□ -0.39
TPM3-212ENST00000368533 MAGEB6Q8N7X4 407 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 SPATA5Q8NB90 893 aa12.62□□□□□ -0.39
TPM3-212ENST00000368533 NOL7Q9UMY1 257 aaKnown RBP12.62□□□□□ -0.39
TPM3-212ENST00000368533 DYNC1I1O14576 645 aa12.61□□□□□ -0.39
TPM3-212ENST00000368533 CYP21A2P08686 494 aa12.61□□□□□ -0.39
TPM3-212ENST00000368533 RNF214Q8ND24 703 aa12.61□□□□□ -0.39
TPM3-212ENST00000368533 GPT2Q8TD30 523 aa12.61□□□□□ -0.39
TPM3-212ENST00000368533 RAB11FIP4Q86YS3 637 aa12.61□□□□□ -0.39
TPM3-212ENST00000368533 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
TPM3-212ENST00000368533 DENND2AQ9ULE3 1009 aa12.61□□□□□ -0.39
TPM3-212ENST00000368533 ZNF532Q9HCE3 1301 aa12.61□□□□□ -0.39
TPM3-212ENST00000368533 HSPD1P10809 573 aaKnown RBP12.6□□□□□ -0.39
TPM3-212ENST00000368533 SF3B3Q15393 1217 aaKnown RBP12.6□□□□□ -0.39
TPM3-212ENST00000368533 ZMYM1Q5SVZ6 1142 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 RUFY3Q7L099 469 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 FBXO3Q9UK99 471 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 RREB1Q92766 1687 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 TERF1P54274 439 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 ANAPC15P60006 121 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 CCDC83Q8IWF9 413 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 RPGRQ92834 1020 aaKnown RBP12.6□□□□□ -0.39
TPM3-212ENST00000368533 INCENPQ9NQS7 918 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 LRP2BPQ9P2M1 347 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 NSFL1CQ9UNZ2 370 aaKnown RBP12.6□□□□□ -0.39
TPM3-212ENST00000368533 LY75O60449 1722 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 BCORQ6W2J9 1755 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 GPAA1O43292 621 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 CYP46A1Q9Y6A2 500 aa12.6□□□□□ -0.39
TPM3-212ENST00000368533 TM4SF1P30408 202 aa12.59□□□□□ -0.39
TPM3-212ENST00000368533 SLC27A3Q5K4L6 730 aa12.59□□□□□ -0.39
TPM3-212ENST00000368533 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
TPM3-212ENST00000368533 BSDC1Q9NW68 430 aaPredicted RBP12.59□□□□□ -0.39
TPM3-212ENST00000368533 C4AP0C0L4 1744 aa12.59□□□□□ -0.39
TPM3-212ENST00000368533 ZNF500O60304 480 aaPredicted RBP12.59□□□□□ -0.39
TPM3-212ENST00000368533 HSP90B1P14625 803 aaKnown RBP12.59□□□□□ -0.39
TPM3-212ENST00000368533 FOSBP53539 338 aa12.59□□□□□ -0.39
TPM3-212ENST00000368533 ARMT1Q9H993 441 aa12.59□□□□□ -0.39
TPM3-212ENST00000368533 TMEM51Q9NW97 253 aa12.59□□□□□ -0.39
TPM3-212ENST00000368533 RAI14Q9P0K7 980 aa12.59□□□□□ -0.39
TPM3-212ENST00000368533 PRKAB2O43741 272 aa12.58□□□□□ -0.4
TPM3-212ENST00000368533 PDE6AP16499 860 aa12.58□□□□□ -0.4
TPM3-212ENST00000368533 C17orf53Q8N3J3 647 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms