RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 RGPD3A6NKT7 1758 aaPredicted RBP17.86■□□□□ 0.45
NEK2-201ENST00000366998 RGPD4Q7Z3J3 1758 aa17.86■□□□□ 0.45
NEK2-201ENST00000366998 RPS6KB1P23443 525 aa17.86■□□□□ 0.45
NEK2-201ENST00000366998 UBE3CQ15386 1083 aa17.86■□□□□ 0.45
NEK2-201ENST00000366998 ZNF804BA4D1E1 1349 aa17.85■□□□□ 0.45
NEK2-201ENST00000366998 POLRMTO00411 1230 aaKnown RBP17.85■□□□□ 0.45
NEK2-201ENST00000366998 COL23A1Q86Y22 540 aaPredicted RBP17.85■□□□□ 0.45
NEK2-201ENST00000366998 TNPO1Q92973 898 aaKnown RBP17.85■□□□□ 0.45
NEK2-201ENST00000366998 INTS4Q96HW7 963 aaKnown RBP17.85■□□□□ 0.45
NEK2-201ENST00000366998 NEK1Q96PY6 1258 aa17.85■□□□□ 0.45
NEK2-201ENST00000366998 NUCB2P80303 420 aa17.84■□□□□ 0.45
NEK2-201ENST00000366998 MAGEB6Q8N7X4 407 aa17.84■□□□□ 0.45
NEK2-201ENST00000366998 TCEANC2Q96MN5 208 aa17.84■□□□□ 0.45
NEK2-201ENST00000366998 COL9A3Q14050 684 aaPredicted RBP17.84■□□□□ 0.45
NEK2-201ENST00000366998 FLAD1Q8NFF5 587 aa17.84■□□□□ 0.45
NEK2-201ENST00000366998 FAM84BQ96KN1 310 aaPredicted RBP17.84■□□□□ 0.45
NEK2-201ENST00000366998 LRP2BPQ9P2M1 347 aa17.84■□□□□ 0.45
NEK2-201ENST00000366998 CTNNA3Q9UI47 895 aa17.84■□□□□ 0.45
NEK2-201ENST00000366998 TCRBV5S4A2TA0A5A2 114 aa17.83■□□□□ 0.44
NEK2-201ENST00000366998 KLRK1P26718 216 aa17.83■□□□□ 0.44
NEK2-201ENST00000366998 ZSCAN31Q96LW9 406 aaPredicted RBP17.83■□□□□ 0.44
NEK2-201ENST00000366998 ANKIB1Q9P2G1 1089 aa17.83■□□□□ 0.44
NEK2-201ENST00000366998 MCM4P33991 863 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 ANKRD1Q15327 319 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 TTLL5Q6EMB2 1281 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 NLGN1Q8N2Q7 840 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 FBXO41Q8TF61 875 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 AIDAQ96BJ3 306 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 RBM17Q96I25 401 aaKnown RBP17.82■□□□□ 0.44
NEK2-201ENST00000366998 DENND2AQ9ULE3 1009 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 COL1A1P02452 1464 aaPredicted RBP17.82■□□□□ 0.44
NEK2-201ENST00000366998 A0A0G2JLW4 131 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 FOXP2O15409 715 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 LARGE1O95461 756 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 CRY2Q49AN0 593 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 STOX1Q6ZVD7 989 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 GBP4Q96PP9 640 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 SH2B1Q9NRF2 756 aaPredicted RBP17.82■□□□□ 0.44
NEK2-201ENST00000366998 ABCF2Q9UG63 623 aa17.82■□□□□ 0.44
NEK2-201ENST00000366998 IMMTQ16891 758 aaKnown RBP17.81■□□□□ 0.44
NEK2-201ENST00000366998 FBXO33Q7Z6M2 555 aa17.81■□□□□ 0.44
NEK2-201ENST00000366998 ANKRD31Q8N7Z5 1873 aa17.81■□□□□ 0.44
NEK2-201ENST00000366998 E7EWF7 191 aa17.8■□□□□ 0.44
NEK2-201ENST00000366998 FGAP02671 866 aa17.8■□□□□ 0.44
NEK2-201ENST00000366998 APPP05067 770 aa17.8■□□□□ 0.44
NEK2-201ENST00000366998 HIBADHP31937 336 aaKnown RBP17.8■□□□□ 0.44
NEK2-201ENST00000366998 PKP1Q13835 747 aa17.8■□□□□ 0.44
NEK2-201ENST00000366998 SLC51AQ86UW1 340 aa17.8■□□□□ 0.44
NEK2-201ENST00000366998 ALDH8A1Q9H2A2 487 aaPredicted RBP17.8■□□□□ 0.44
NEK2-201ENST00000366998 RAI14Q9P0K7 980 aa17.8■□□□□ 0.44
NEK2-201ENST00000366998 HMGB1P09429 215 aaKnown RBP17.8■□□□□ 0.44
NEK2-201ENST00000366998 HAND2P61296 217 aa17.8■□□□□ 0.44
NEK2-201ENST00000366998 CCDC83Q8IWF9 413 aa17.8■□□□□ 0.44
NEK2-201ENST00000366998 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.8■□□□□ 0.44
NEK2-201ENST00000366998 XDHP47989 1333 aa17.79■□□□□ 0.44
NEK2-201ENST00000366998 PNPLA7Q6ZV29 1317 aa17.79■□□□□ 0.44
NEK2-201ENST00000366998 SEMA3EO15041 775 aa17.79■□□□□ 0.44
NEK2-201ENST00000366998 MBD4O95243 580 aa17.79■□□□□ 0.44
NEK2-201ENST00000366998 FGD1P98174 961 aa17.79■□□□□ 0.44
NEK2-201ENST00000366998 TOB2Q14106 344 aaPredicted RBP17.79■□□□□ 0.44
NEK2-201ENST00000366998 ME3Q16798 604 aa17.79■□□□□ 0.44
NEK2-201ENST00000366998 TPCN1Q9ULQ1 816 aa17.79■□□□□ 0.44
NEK2-201ENST00000366998 LEMD3Q9Y2U8 911 aa17.79■□□□□ 0.44
NEK2-201ENST00000366998 NRXN2Q9P2S2 1712 aa17.79■□□□□ 0.44
NEK2-201ENST00000366998 Q6ZUG5 572 aa17.78■□□□□ 0.44
NEK2-201ENST00000366998 STRBPQ96SI9 672 aaKnown RBP17.78■□□□□ 0.44
NEK2-201ENST00000366998 ZNF213O14771 459 aa17.78■□□□□ 0.44
NEK2-201ENST00000366998 CYP7A1P22680 504 aa17.78■□□□□ 0.44
NEK2-201ENST00000366998 CHAF1AQ13111 956 aaPredicted RBP17.78■□□□□ 0.44
NEK2-201ENST00000366998 MSL1Q68DK7 614 aa17.78■□□□□ 0.44
NEK2-201ENST00000366998 ARMT1Q9H993 441 aa17.78■□□□□ 0.44
NEK2-201ENST00000366998 SMC3Q9UQE7 1217 aa17.78■□□□□ 0.44
NEK2-201ENST00000366998 PARP3Q9Y6F1 533 aa17.78■□□□□ 0.44
NEK2-201ENST00000366998 DDX11L8A8MPP1 907 aa17.77■□□□□ 0.43
NEK2-201ENST00000366998 MMP10P09238 476 aa17.77■□□□□ 0.43
NEK2-201ENST00000366998 EN1Q05925 392 aaPredicted RBP17.77■□□□□ 0.43
NEK2-201ENST00000366998 EZH2Q15910 746 aaKnown RBP17.77■□□□□ 0.43
NEK2-201ENST00000366998 DHX32Q7L7V1 743 aaKnown RBP17.77■□□□□ 0.43
NEK2-201ENST00000366998 TXNRD3Q86VQ6 643 aa17.77■□□□□ 0.43
NEK2-201ENST00000366998 NECAB1Q8N987 351 aa17.77■□□□□ 0.43
NEK2-201ENST00000366998 LRRC2Q9BYS8 371 aa17.77■□□□□ 0.43
NEK2-201ENST00000366998 HOXA10P31260 410 aaPredicted RBP17.76■□□□□ 0.43
NEK2-201ENST00000366998 GPSM2P81274 684 aa17.76■□□□□ 0.43
NEK2-201ENST00000366998 FOXD4L5Q5VV16 416 aaPredicted RBP17.76■□□□□ 0.43
NEK2-201ENST00000366998 MIGA1Q8NAN2 632 aa17.76■□□□□ 0.43
NEK2-201ENST00000366998 FOXD4L4Q8WXT5 416 aaPredicted RBP17.76■□□□□ 0.43
NEK2-201ENST00000366998 CACNA1SQ13698 1873 aa17.76■□□□□ 0.43
NEK2-201ENST00000366998 CCDC88AQ3V6T2 1871 aa17.76■□□□□ 0.43
NEK2-201ENST00000366998 BBOX1O75936 387 aa17.75■□□□□ 0.43
NEK2-201ENST00000366998 CRAMP1Q96RY5 1269 aa17.75■□□□□ 0.43
NEK2-201ENST00000366998 BRIP1Q9BX63 1249 aa17.75■□□□□ 0.43
NEK2-201ENST00000366998 NSFL1CQ9UNZ2 370 aaKnown RBP17.75■□□□□ 0.43
NEK2-201ENST00000366998 CHD4Q14839 1912 aa17.75■□□□□ 0.43
NEK2-201ENST00000366998 IRS2Q9Y4H2 1338 aa17.75■□□□□ 0.43
NEK2-201ENST00000366998 KLRG2A4D1S0 409 aaPredicted RBP17.75■□□□□ 0.43
NEK2-201ENST00000366998 PATL2C9JE40 543 aaKnown RBP17.75■□□□□ 0.43
NEK2-201ENST00000366998 UFL1O94874 794 aa17.75■□□□□ 0.43
NEK2-201ENST00000366998 STK3Q13188 491 aa17.75■□□□□ 0.43
NEK2-201ENST00000366998 LCORLQ8N3X6 602 aa17.75■□□□□ 0.43
NEK2-201ENST00000366998 GPR101Q96P66 508 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms