RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 NDUFB9Q9Y6M9 179 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 PITPNM2Q9BZ72 1349 aa1.38□□□□□ -2.19
RNU6-54P-201ENST00000365563 TMEM265A0A087WTH1 108 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 H3BRJ5 948 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 J3QW42 95 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 ETV2O00321 342 aaPredicted RBP1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 ZMYND10O75800 440 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 SASH3O75995 380 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 TIAF1O95411 115 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 FSHBP01225 129 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 SRFP11831 508 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 PTPRAP18433 802 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 TARSP26639 723 aaKnown RBP1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 RFC5P40937 340 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 GDF5P43026 501 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 ATXN1P54253 815 aaKnown RBP1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 NLRP12P59046 1061 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 PLP2Q04941 152 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 ZNF827Q17R98 1081 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 ZNF385BQ569K4 471 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 TBCELQ5QJ74 424 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 SH3PXD2AQ5TCZ1 1133 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 SP8Q8IXZ3 490 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 IFT43Q96FT9 208 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 AK7Q96M32 723 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 TEPSINQ96N21 525 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 MRIQ9BWK5 157 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 LACRTQ9GZZ8 138 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 SEMA6CQ9H3T2 930 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 ZNF358Q9NW07 568 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 CTNND2Q9UQB3 1225 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 HCN4Q9Y3Q4 1203 aa1.37□□□□□ -2.19
RNU6-54P-201ENST00000365563 LOC100289279A0A1B0GTE1 492 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 DDX3YO15523 660 aaKnown RBP1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 EIF4EBP3O60516 100 aaPredicted RBP1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 TNFRSF1AP19438 455 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 CDC25BP30305 580 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 IDH3AP50213 366 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 EPHA4P54764 986 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 IKZF1Q13422 519 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 AOC3Q16853 763 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 EML3Q32P44 896 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 CEP135Q66GS9 1140 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 CDPF1Q6NVV7 123 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 POTEAQ6S8J7 498 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 USP51Q70EK9 711 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 CYFIP1Q7L576 1253 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 ALDH16A1Q8IZ83 802 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 SHISA5Q8N114 240 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 PLD6Q8N2A8 252 aaKnown RBP1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 PHTF2Q8N3S3 785 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 PLPP7Q8NBV4 271 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 GATA6Q92908 595 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 KCNN1Q92952 543 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 CCDC120Q96HB5 630 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 GJD4Q96KN9 370 aaPredicted RBP1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 TMPRSS13Q9BYE2 586 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 MKNK2Q9HBH9 465 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 CHIC2Q9UKJ5 165 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 NOD1Q9Y239 953 aa1.36□□□□□ -2.19
RNU6-54P-201ENST00000365563 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 ZC3H12DA2A288 527 aaKnown RBP1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 CYR61O00622 381 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 TM4SF5O14894 197 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 PPP1R12BO60237 982 aaPredicted RBP1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 TRIM13O60858 407 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 RAB6AP20340 208 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 EPHA1P21709 976 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 INPP5BP32019 993 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 GTF2IP78347 998 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 ZP2Q05996 745 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 PDE4DQ08499 809 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 HYAL2Q12891 473 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 TSGA10IPQ3SY00 556 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 HP1BP3Q5SSJ5 553 aaPredicted RBP1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 OGFOD3Q6PK18 319 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 TNS4Q8IZW8 715 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 STAG2Q8N3U4 1231 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 PROCA1Q8NCQ7 364 aaPredicted RBP1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 C2CD4AQ8NCU7 369 aaPredicted RBP1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 BAHD1Q8TBE0 780 aaPredicted RBP1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 ASB11Q8WXH4 323 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 KLHDC7BQ96G42 594 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 NGLY1Q96IV0 654 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 XYLT2Q9H1B5 865 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 CNOT6Q9ULM6 557 aaKnown RBP1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 PCDHGA11Q9Y5H2 935 aa1.35□□□□□ -2.19
RNU6-54P-201ENST00000365563 OTOL1A6NHN0 477 aaPredicted RBP1.34□□□□□ -2.19
RNU6-54P-201ENST00000365563 K7ESM1 405 aa1.34□□□□□ -2.19
RNU6-54P-201ENST00000365563 LZTS3O60299 673 aaPredicted RBP1.34□□□□□ -2.19
RNU6-54P-201ENST00000365563 XYLBO75191 536 aa1.34□□□□□ -2.19
RNU6-54P-201ENST00000365563 SEMA7AO75326 666 aa1.34□□□□□ -2.19
RNU6-54P-201ENST00000365563 CEACAM5P06731 702 aa1.34□□□□□ -2.19
RNU6-54P-201ENST00000365563 RAC2P15153 192 aa1.34□□□□□ -2.19
RNU6-54P-201ENST00000365563 CD96P40200 585 aa1.34□□□□□ -2.19
RNU6-54P-201ENST00000365563 SOX4Q06945 474 aaPredicted RBP1.34□□□□□ -2.19
RNU6-54P-201ENST00000365563 C19orf57Q0VDD7 668 aa1.34□□□□□ -2.19
RNU6-54P-201ENST00000365563 FYB2Q5VWT5 728 aa1.34□□□□□ -2.19
RNU6-54P-201ENST00000365563 FBXO31Q5XUX0 539 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms