RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 IGFLR1Q9H665 355 aa7.52□□□□□ -1.21
RPL39-201ENST00000361575 LCE2BO14633 110 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 STK10O94804 968 aaKnown RBP7.51□□□□□ -1.21
RPL39-201ENST00000361575 RLBP1P12271 317 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 PCBP4P57723 403 aaKnown RBP7.51□□□□□ -1.21
RPL39-201ENST00000361575 LAPTM4AQ15012 233 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 PCNX4Q63HM2 1172 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 VN1R5Q7Z5H4 357 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 VWA5B2Q8N398 1253 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 GOLM1Q8NBJ4 401 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 STK35Q8TDR2 534 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 HIRIP3Q9BW71 556 aaPredicted RBP7.51□□□□□ -1.21
RPL39-201ENST00000361575 ZNF408Q9H9D4 720 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 ZFYVE1Q9HBF4 777 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 SOX13Q9UN79 622 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 PHF24Q9UPV7 400 aa7.51□□□□□ -1.21
RPL39-201ENST00000361575 SUPT16HQ9Y5B9 1047 aaKnown RBP7.51□□□□□ -1.21
RPL39-201ENST00000361575 CDC14CA4D256 554 aa7.5□□□□□ -1.21
RPL39-201ENST00000361575 SIN3BO75182 1162 aa7.5□□□□□ -1.21
RPL39-201ENST00000361575 EIF2AK2P19525 551 aaKnown RBP7.5□□□□□ -1.21
RPL39-201ENST00000361575 BMP6P22004 513 aa7.5□□□□□ -1.21
RPL39-201ENST00000361575 ZNF157P51786 506 aaPredicted RBP7.5□□□□□ -1.21
RPL39-201ENST00000361575 SERINC3Q13530 473 aa7.5□□□□□ -1.21
RPL39-201ENST00000361575 GAS6Q14393 721 aa7.5□□□□□ -1.21
RPL39-201ENST00000361575 ZNF423Q2M1K9 1284 aa7.5□□□□□ -1.21
RPL39-201ENST00000361575 PERM1Q5SV97 790 aa7.5□□□□□ -1.21
RPL39-201ENST00000361575 NANOS1Q8WY41 292 aaKnown RBP7.5□□□□□ -1.21
RPL39-201ENST00000361575 TNFRSF25Q93038 417 aa7.5□□□□□ -1.21
RPL39-201ENST00000361575 UBE2OQ9C0C9 1292 aaKnown RBP7.5□□□□□ -1.21
RPL39-201ENST00000361575 PRR12Q9ULL5 1215 aa7.5□□□□□ -1.21
RPL39-201ENST00000361575 SLC6A14Q9UN76 642 aa7.5□□□□□ -1.21
RPL39-201ENST00000361575 PCDHB5Q9Y5E4 795 aa7.5□□□□□ -1.21
RPL39-201ENST00000361575 B3GALT4O96024 378 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 CPB1P15086 417 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 ETFBP38117 255 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 RPS26P62854 115 aaKnown RBP7.49□□□□□ -1.21
RPL39-201ENST00000361575 TBC1D8BQ0IIM8 1120 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 NEUROD1Q13562 356 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 CEP135Q66GS9 1140 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 BNC2Q6ZN30 1099 aaPredicted RBP7.49□□□□□ -1.21
RPL39-201ENST00000361575 FAM196AQ6ZSG2 479 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 NOP9Q86U38 636 aaKnown RBP7.49□□□□□ -1.21
RPL39-201ENST00000361575 TRIM42Q8IWZ5 723 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 FBXO27Q8NI29 283 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 BSNDQ8WZ55 320 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 PLD4Q96BZ4 506 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 CLEC4MQ9H2X3 399 aaPredicted RBP7.49□□□□□ -1.21
RPL39-201ENST00000361575 GPN3Q9UHW5 284 aaPredicted RBP7.49□□□□□ -1.21
RPL39-201ENST00000361575 TRIM33Q9UPN9 1127 aa7.49□□□□□ -1.21
RPL39-201ENST00000361575 FAM221AA4D161 298 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 F13A1P00488 732 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 GHRHP01286 108 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 PCDH1Q08174 1060 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 SNAP47Q5SQN1 464 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 KANK3Q6NY19 840 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 FAM35AQ86V20 835 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 SLITRK4Q8IW52 837 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 TRERF1Q96PN7 1200 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 PUS7Q96PZ0 661 aaKnown RBP7.48□□□□□ -1.21
RPL39-201ENST00000361575 LPIN3Q9BQK8 851 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 ADAM19Q9H013 955 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 OSBPL2Q9H1P3 480 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 ZSWIM4Q9H7M6 989 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 TMEM39AQ9NV64 488 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 MRVI1Q9Y6F6 885 aa7.48□□□□□ -1.21
RPL39-201ENST00000361575 BMP4P12644 408 aa7.47□□□□□ -1.21
RPL39-201ENST00000361575 APOBRQ0VD83 1088 aa7.47□□□□□ -1.21
RPL39-201ENST00000361575 NFX1Q12986 1120 aaKnown RBP7.47□□□□□ -1.21
RPL39-201ENST00000361575 FCHSD1Q86WN1 690 aa7.47□□□□□ -1.21
RPL39-201ENST00000361575 LRRC3Q9BY71 257 aa7.47□□□□□ -1.21
RPL39-201ENST00000361575 TBX22Q9Y458 520 aa7.47□□□□□ -1.21
RPL39-201ENST00000361575 ADARB2-AS1A8MUL3 147 aa7.46□□□□□ -1.22
RPL39-201ENST00000361575 KLF4O43474 513 aa7.46□□□□□ -1.22
RPL39-201ENST00000361575 SMNDC1O75940 238 aaKnown RBP eCLIP7.46□□□□□ -1.221e-323■□□□□ 11.1
RPL39-201ENST00000361575 SSBP05455 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
RPL39-201ENST00000361575 ADH7P40394 386 aa7.46□□□□□ -1.22
RPL39-201ENST00000361575 SEPT6Q14141 434 aa7.46□□□□□ -1.22
RPL39-201ENST00000361575 PCSK7Q16549 785 aa7.46□□□□□ -1.22
RPL39-201ENST00000361575 SV2AQ7L0J3 742 aa7.46□□□□□ -1.22
RPL39-201ENST00000361575 NLGN1Q8N2Q7 840 aa7.46□□□□□ -1.22
RPL39-201ENST00000361575 GRIN3AQ8TCU5 1115 aa7.46□□□□□ -1.22
RPL39-201ENST00000361575 GAL3ST3Q96A11 431 aa7.46□□□□□ -1.22
RPL39-201ENST00000361575 SHDQ96IW2 340 aa7.46□□□□□ -1.22
RPL39-201ENST00000361575 SMG9Q9H0W8 520 aaKnown RBP7.46□□□□□ -1.22
RPL39-201ENST00000361575 AVENQ9NQS1 362 aaPredicted RBP7.46□□□□□ -1.22
RPL39-201ENST00000361575 TLR3O15455 904 aaKnown RBP7.45□□□□□ -1.22
RPL39-201ENST00000361575 ESRRAP11474 423 aaPredicted RBP7.45□□□□□ -1.22
RPL39-201ENST00000361575 NME2P22392 152 aa7.45□□□□□ -1.22
RPL39-201ENST00000361575 PTPN11Q06124 597 aaPredicted RBP7.45□□□□□ -1.22
RPL39-201ENST00000361575 COL9A2Q14055 689 aaPredicted RBP7.45□□□□□ -1.22
RPL39-201ENST00000361575 BMS1Q14692 1282 aaKnown RBP7.45□□□□□ -1.22
RPL39-201ENST00000361575 SOGA3Q5TF21 947 aa7.45□□□□□ -1.22
RPL39-201ENST00000361575 ZNF746Q6NUN9 644 aaPredicted RBP7.45□□□□□ -1.22
RPL39-201ENST00000361575 FOXR1Q6PIV2 292 aa7.45□□□□□ -1.22
RPL39-201ENST00000361575 CCDC81Q6ZN84 652 aa7.45□□□□□ -1.22
RPL39-201ENST00000361575 GATAD2BQ8WXI9 593 aa7.45□□□□□ -1.22
RPL39-201ENST00000361575 NKD1Q969G9 470 aa7.45□□□□□ -1.22
RPL39-201ENST00000361575 LACRTQ9GZZ8 138 aa7.45□□□□□ -1.22
RPL39-201ENST00000361575 SH2B1Q9NRF2 756 aaPredicted RBP7.45□□□□□ -1.22
RPL39-201ENST00000361575 PPT2Q9UMR5 302 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms