RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 GJA3Q9Y6H8 435 aa9.33□□□□□ -0.92
CCL28-201ENST00000361115 COL4A1P02462 1669 aa9.32□□□□□ -0.92
CCL28-201ENST00000361115 EPS15P42566 896 aa9.32□□□□□ -0.92
CCL28-201ENST00000361115 PKP1Q13835 747 aa9.32□□□□□ -0.92
CCL28-201ENST00000361115 APOBEC3FQ8IUX4 373 aaKnown RBP9.32□□□□□ -0.92
CCL28-201ENST00000361115 MANSC4A6NHS7 340 aaPredicted RBP9.32□□□□□ -0.92
CCL28-201ENST00000361115 ZBTB48P10074 688 aaPredicted RBP9.32□□□□□ -0.92
CCL28-201ENST00000361115 HUNKP57058 714 aa9.32□□□□□ -0.92
CCL28-201ENST00000361115 NUCB1Q02818 461 aa9.32□□□□□ -0.92
CCL28-201ENST00000361115 TSR2Q969E8 191 aaKnown RBP9.32□□□□□ -0.92
CCL28-201ENST00000361115 ERO1AQ96HE7 468 aa9.32□□□□□ -0.92
CCL28-201ENST00000361115 MED23Q9ULK4 1368 aa9.32□□□□□ -0.92
CCL28-201ENST00000361115 PRKAR2BP31323 418 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 NFE2L2Q16236 605 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 RASAL3Q86YV0 1011 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 SULF1Q8IWU6 871 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 ZNF710Q8N1W2 664 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 GPT2Q8TD30 523 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 USP16Q9Y5T5 823 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 HMOX1P09601 288 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 OTUD7BQ6GQQ9 843 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 CHAMP1Q96JM3 812 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 SLC24A3Q9HC58 644 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 CNOT7Q9UIV1 285 aaKnown RBP9.31□□□□□ -0.92
CCL28-201ENST00000361115 ATP2B4P23634 1241 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 MCM5P33992 734 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 CBX1P83916 185 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 MTMR14Q8NCE2 650 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 SMC4Q9NTJ3 1288 aa9.31□□□□□ -0.92
CCL28-201ENST00000361115 FKTNO75072 461 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 TCIRG1Q13488 830 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 GPR153Q6NV75 609 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 TBC1D9Q6ZT07 1266 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 PODNQ7Z5L7 613 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 TMEM57Q8N5G2 664 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 CCDC39Q9UFE4 941 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 DDX19BQ9UMR2 479 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.3□□□□□ -0.92
CCL28-201ENST00000361115 MYH3P11055 1940 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 CYP2E1P05181 493 aaPredicted RBP9.3□□□□□ -0.92
CCL28-201ENST00000361115 BMP2KLQ5H9B9 411 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 CHD1LQ86WJ1 897 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 SSH1Q8WYL5 1049 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 ARMC5Q96C12 935 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 ZBTB40Q9NUA8 1239 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 NSFL1CQ9UNZ2 370 aaKnown RBP9.3□□□□□ -0.92
CCL28-201ENST00000361115 SSC5DA1L4H1 1573 aa9.3□□□□□ -0.92
CCL28-201ENST00000361115 FAM177BA6PVY3 158 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 PRPF40AO75400 957 aaKnown RBP9.29□□□□□ -0.92
CCL28-201ENST00000361115 KIF23Q02241 960 aaPredicted RBP9.29□□□□□ -0.92
CCL28-201ENST00000361115 ATP2B3Q16720 1220 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 ARMC9Q7Z3E5 817 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 MYRIPQ8NFW9 859 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 TMEM63CQ9P1W3 806 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 HPS5Q9UPZ3 1129 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 UBN2Q6ZU65 1347 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 EXOSC9Q06265 439 aaKnown RBP9.29□□□□□ -0.92
CCL28-201ENST00000361115 FMR1Q06787 632 aaKnown RBP eCLIP9.29□□□□□ -0.92
CCL28-201ENST00000361115 KIF4BQ2VIQ3 1234 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 SUSD4Q5VX71 490 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 C15orf52Q6ZUT6 534 aaKnown RBP9.29□□□□□ -0.92
CCL28-201ENST00000361115 PLBD2Q8NHP8 589 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 KCNG1Q9UIX4 513 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 KIF16BQ96L93 1317 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 SYCE3A1L190 88 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 PPP4R3BQ5MIZ7 849 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 ATF7IPQ6VMQ6 1270 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 MICALL2Q8IY33 904 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 RNF214Q8ND24 703 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 RNF25Q96BH1 459 aaPredicted RBP9.29□□□□□ -0.92
CCL28-201ENST00000361115 HOOK2Q96ED9 719 aa9.29□□□□□ -0.92
CCL28-201ENST00000361115 NOB1Q9ULX3 412 aaKnown RBP9.29□□□□□ -0.92
CCL28-201ENST00000361115 CACNA1FO60840 1977 aa9.28□□□□□ -0.92
CCL28-201ENST00000361115 TESPA1A2RU30 521 aaPredicted RBP9.28□□□□□ -0.92
CCL28-201ENST00000361115 ZNF157P51786 506 aaPredicted RBP9.28□□□□□ -0.92
CCL28-201ENST00000361115 CCDC27Q2M243 656 aa9.28□□□□□ -0.92
CCL28-201ENST00000361115 KRT26Q7Z3Y9 468 aa9.28□□□□□ -0.92
CCL28-201ENST00000361115 LRP10Q7Z4F1 713 aa9.28□□□□□ -0.92
CCL28-201ENST00000361115 HYPKQ9NX55 129 aa9.28□□□□□ -0.92
CCL28-201ENST00000361115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.28□□□□□ -0.92
CCL28-201ENST00000361115 U2SURPO15042 1029 aaKnown RBP9.28□□□□□ -0.92
CCL28-201ENST00000361115 AOC3Q16853 763 aa9.28□□□□□ -0.92
CCL28-201ENST00000361115 LRSAM1Q6UWE0 723 aa9.28□□□□□ -0.92
CCL28-201ENST00000361115 TICAM2Q86XR7 235 aa9.28□□□□□ -0.92
CCL28-201ENST00000361115 ZNF592Q92610 1267 aa9.28□□□□□ -0.92
CCL28-201ENST00000361115 ISCA1Q9BUE6 129 aa9.28□□□□□ -0.92
CCL28-201ENST00000361115 AOC2O75106 756 aa9.27□□□□□ -0.92
CCL28-201ENST00000361115 WDHD1O75717 1129 aaPredicted RBP9.27□□□□□ -0.92
CCL28-201ENST00000361115 RSBN1LQ6PCB5 846 aaPredicted RBP9.27□□□□□ -0.92
CCL28-201ENST00000361115 NLRP10Q86W26 655 aa9.27□□□□□ -0.92
CCL28-201ENST00000361115 CDCA5Q96FF9 252 aa9.27□□□□□ -0.92
CCL28-201ENST00000361115 WASHC4Q2M389 1173 aa9.27□□□□□ -0.93
CCL28-201ENST00000361115 HDAC9Q9UKV0 1011 aa9.27□□□□□ -0.93
CCL28-201ENST00000361115 ZDHHC9Q9Y397 364 aa9.27□□□□□ -0.93
CCL28-201ENST00000361115 NUCB2P80303 420 aa9.27□□□□□ -0.93
CCL28-201ENST00000361115 HLFQ16534 295 aa9.27□□□□□ -0.93
CCL28-201ENST00000361115 ANKRD45Q5TZF3 282 aa9.27□□□□□ -0.93
CCL28-201ENST00000361115 NKX2-3Q8TAU0 364 aa9.27□□□□□ -0.93
CCL28-201ENST00000361115 GLIS2Q9BZE0 524 aaPredicted RBP9.27□□□□□ -0.93
CCL28-201ENST00000361115 GTPBP4Q9BZE4 634 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms