RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 LINC00301Q8NCQ3 95 aa20.93■□□□□ 0.94
PTPA-206ENST00000358994 NCOA5Q9HCD5 579 aaKnown RBP20.93■□□□□ 0.94
PTPA-206ENST00000358994 EIF4A1P60842 406 aaKnown RBP20.92■□□□□ 0.94
PTPA-206ENST00000358994 G3BP1Q13283 466 aaKnown RBP eCLIP20.92■□□□□ 0.942e-6■■■■□ 24.8
PTPA-206ENST00000358994 SALL1Q9NSC2 1324 aa20.92■□□□□ 0.94
PTPA-206ENST00000358994 PLEKHG3A1L390 1219 aa20.92■□□□□ 0.94
PTPA-206ENST00000358994 CCDC151A5D8V7 595 aa20.92■□□□□ 0.94
PTPA-206ENST00000358994 KIFC2Q96AC6 838 aa20.92■□□□□ 0.94
PTPA-206ENST00000358994 CLIC4Q9Y696 253 aa20.92■□□□□ 0.94
PTPA-206ENST00000358994 TMEM232C9JQI7 657 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 FOXR1Q6PIV2 292 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 VSTM4Q8IW00 320 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 SIRT1Q96EB6 747 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 LAMA4Q16363 1823 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 KDM4FA0A1W2PPD8 638 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 ARHGAP6O43182 974 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 ZNF202O95125 648 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 TXLNAP40222 546 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 GOLGA1Q92805 767 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 VPS18Q9P253 973 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 SERPINC1P01008 464 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 CWF19L2Q2TBE0 894 aaKnown RBP20.91■□□□□ 0.94
PTPA-206ENST00000358994 CFAP100Q494V2 611 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 LEKR1Q6ZMV7 388 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 DHX58Q96C10 678 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 KAZALD1Q96I82 304 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 PDE11AQ9HCR9 933 aa20.91■□□□□ 0.94
PTPA-206ENST00000358994 U3KPZ7 1027 aaPredicted RBP20.91■□□□□ 0.94
PTPA-206ENST00000358994 AGLP35573 1532 aa20.9■□□□□ 0.94
PTPA-206ENST00000358994 SF3A1Q15459 793 aaKnown RBP20.9■□□□□ 0.94
PTPA-206ENST00000358994 PACS2Q86VP3 889 aa20.9■□□□□ 0.94
PTPA-206ENST00000358994 MAP3K2Q9Y2U5 619 aa20.9■□□□□ 0.94
PTPA-206ENST00000358994 TECPR2O15040 1411 aa20.9■□□□□ 0.94
PTPA-206ENST00000358994 IVLP07476 585 aa20.9■□□□□ 0.94
PTPA-206ENST00000358994 STK38Q15208 465 aa20.9■□□□□ 0.94
PTPA-206ENST00000358994 GEMIN8Q9NWZ8 242 aaKnown RBP20.9■□□□□ 0.94
PTPA-206ENST00000358994 KCNQ3O43525 872 aa20.89■□□□□ 0.93
PTPA-206ENST00000358994 TOP1P11387 765 aaKnown RBP20.89■□□□□ 0.93
PTPA-206ENST00000358994 BRD3Q15059 726 aa20.89■□□□□ 0.93
PTPA-206ENST00000358994 NBPF6Q5VWK0 638 aa20.89■□□□□ 0.93
PTPA-206ENST00000358994 JAKMIP3Q5VZ66 844 aa20.89■□□□□ 0.93
PTPA-206ENST00000358994 GOLGA6L1Q8N7Z2 621 aa20.89■□□□□ 0.93
PTPA-206ENST00000358994 SUCLG2Q96I99 432 aa20.89■□□□□ 0.93
PTPA-206ENST00000358994 NBPF4Q96M43 638 aa20.89■□□□□ 0.93
PTPA-206ENST00000358994 A0A1B0GUL7 405 aa20.89■□□□□ 0.93
PTPA-206ENST00000358994 DHX32Q7L7V1 743 aaKnown RBP20.89■□□□□ 0.93
PTPA-206ENST00000358994 CBFA2T2O43439 604 aa20.88■□□□□ 0.93
PTPA-206ENST00000358994 MCM6Q14566 821 aa20.88■□□□□ 0.93
PTPA-206ENST00000358994 NDUFB9Q9Y6M9 179 aa20.88■□□□□ 0.93
PTPA-206ENST00000358994 TOPAZ1Q8N9V7 1692 aa20.88■□□□□ 0.93
PTPA-206ENST00000358994 ZNF609O15014 1411 aa20.88■□□□□ 0.93
PTPA-206ENST00000358994 MAGEA9P43362 315 aa20.88■□□□□ 0.93
PTPA-206ENST00000358994 OTUD7BQ6GQQ9 843 aa20.88■□□□□ 0.93
PTPA-206ENST00000358994 TOGARAM2Q6ZUX3 1019 aa20.88■□□□□ 0.93
PTPA-206ENST00000358994 BICC1Q9H694 974 aaKnown RBP20.88■□□□□ 0.93
PTPA-206ENST00000358994 ZSWIM4Q9H7M6 989 aa20.88■□□□□ 0.93
PTPA-206ENST00000358994 CARMIL3Q8ND23 1372 aa20.87■□□□□ 0.93
PTPA-206ENST00000358994 FDPSP14324 419 aaKnown RBP20.87■□□□□ 0.93
PTPA-206ENST00000358994 BEND6Q5SZJ8 279 aaPredicted RBP20.87■□□□□ 0.93
PTPA-206ENST00000358994 KCNG4Q8TDN1 519 aa20.87■□□□□ 0.93
PTPA-206ENST00000358994 CHMP4CQ96CF2 233 aa20.87■□□□□ 0.93
PTPA-206ENST00000358994 NCAPD2Q15021 1401 aa20.87■□□□□ 0.93
PTPA-206ENST00000358994 SPTLC2O15270 562 aa20.87■□□□□ 0.93
PTPA-206ENST00000358994 N4BP1O75113 896 aaKnown RBP20.87■□□□□ 0.93
PTPA-206ENST00000358994 RPS6KA5O75582 802 aa20.87■□□□□ 0.93
PTPA-206ENST00000358994 POLR3DP05423 398 aaPredicted RBP20.87■□□□□ 0.93
PTPA-206ENST00000358994 NOM1Q5C9Z4 860 aaKnown RBP20.87■□□□□ 0.93
PTPA-206ENST00000358994 KLHDC4Q8TBB5 520 aa20.87■□□□□ 0.93
PTPA-206ENST00000358994 INTS13Q9NVM9 706 aa20.87■□□□□ 0.93
PTPA-206ENST00000358994 GOLGA6L9A6NEM1 432 aa20.86■□□□□ 0.93
PTPA-206ENST00000358994 HOXB7P09629 217 aa20.86■□□□□ 0.93
PTPA-206ENST00000358994 BAG1Q99933 345 aaPredicted RBP20.86■□□□□ 0.93
PTPA-206ENST00000358994 JRKLQ9Y4A0 524 aa20.86■□□□□ 0.93
PTPA-206ENST00000358994 NWD1Q149M9 1564 aa20.86■□□□□ 0.93
PTPA-206ENST00000358994 MYL5Q02045 173 aa20.86■□□□□ 0.93
PTPA-206ENST00000358994 TTC31Q49AM3 519 aaPredicted RBP20.86■□□□□ 0.93
PTPA-206ENST00000358994 AGXT2Q9BYV1 514 aa20.86■□□□□ 0.93
PTPA-206ENST00000358994 ANKZF1Q9H8Y5 726 aa20.86■□□□□ 0.93
PTPA-206ENST00000358994 EIF3CLB5ME19 914 aaKnown RBP20.85■□□□□ 0.93
PTPA-206ENST00000358994 PFKFB1P16118 471 aa20.85■□□□□ 0.93
PTPA-206ENST00000358994 EXOSC10Q01780 885 aaKnown RBP20.85■□□□□ 0.93
PTPA-206ENST00000358994 HNRNPLLQ8WVV9 542 aaKnown RBP20.85■□□□□ 0.93
PTPA-206ENST00000358994 EIF3CQ99613 913 aaKnown RBP20.85■□□□□ 0.93
PTPA-206ENST00000358994 POLR3EQ9NVU0 708 aa20.85■□□□□ 0.93
PTPA-206ENST00000358994 ROBO2Q9HCK4 1378 aa20.85■□□□□ 0.93
PTPA-206ENST00000358994 YEATS4O95619 227 aa20.85■□□□□ 0.93
PTPA-206ENST00000358994 PDIA3P30101 505 aaKnown RBP20.85■□□□□ 0.93
PTPA-206ENST00000358994 FAN1Q9Y2M0 1017 aa20.85■□□□□ 0.93
PTPA-206ENST00000358994 HMGB1P09429 215 aaKnown RBP20.84■□□□□ 0.93
PTPA-206ENST00000358994 GUCY2CP25092 1073 aa20.84■□□□□ 0.93
PTPA-206ENST00000358994 AXDND1Q5T1B0 1012 aaPredicted RBP20.84■□□□□ 0.93
PTPA-206ENST00000358994 TUBE1Q9UJT0 475 aa20.84■□□□□ 0.93
PTPA-206ENST00000358994 CEMIPQ8WUJ3 1361 aa20.84■□□□□ 0.93
PTPA-206ENST00000358994 TBX2Q13207 712 aaPredicted RBP20.84■□□□□ 0.93
PTPA-206ENST00000358994 HDXQ7Z353 690 aa20.84■□□□□ 0.93
PTPA-206ENST00000358994 SLC26A8Q96RN1 970 aa20.84■□□□□ 0.93
PTPA-206ENST00000358994 LGR6Q9HBX8 967 aa20.84■□□□□ 0.93
PTPA-206ENST00000358994 CHMP4BP1P59074 171 aa20.83■□□□□ 0.93
PTPA-206ENST00000358994 TEFQ10587 303 aa20.83■□□□□ 0.93
PTPA-206ENST00000358994 PROSER3Q2NL68 480 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms