RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 BEND3Q5T5X7 828 aa16.76■□□□□ 0.27
SLC6A20-202ENST00000358525 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
SLC6A20-202ENST00000358525 ZSWIM4Q9H7M6 989 aa16.76■□□□□ 0.27
SLC6A20-202ENST00000358525 BRD1O95696 1058 aa16.75■□□□□ 0.27
SLC6A20-202ENST00000358525 CDC37L1Q7L3B6 337 aa16.75■□□□□ 0.27
SLC6A20-202ENST00000358525 B4E1Z4 1266 aa16.75■□□□□ 0.27
SLC6A20-202ENST00000358525 STAT6P42226 847 aa16.75■□□□□ 0.27
SLC6A20-202ENST00000358525 CRACR2AQ9BSW2 395 aa16.75■□□□□ 0.27
SLC6A20-202ENST00000358525 SMARCC1Q92922 1105 aaPredicted RBP16.75■□□□□ 0.27
SLC6A20-202ENST00000358525 HECW2Q9P2P5 1572 aa16.75■□□□□ 0.27
SLC6A20-202ENST00000358525 PTH1RQ03431 593 aa16.75■□□□□ 0.27
SLC6A20-202ENST00000358525 USO1O60763 962 aaKnown RBP16.75■□□□□ 0.27
SLC6A20-202ENST00000358525 KDRP35968 1356 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 KAT6BQ8WYB5 2073 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 POLR3GO15318 223 aaPredicted RBP16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 CUL5Q93034 780 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 TMEM63CQ9P1W3 806 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 RDXP35241 583 aaKnown RBP16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 RMND1Q9NWS8 449 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 DNAI1Q9UI46 699 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 RTL9Q8NET4 1388 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 IFNKQ9P0W0 207 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 MAP3K4Q9Y6R4 1608 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 ZNF853P0CG23 659 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 FAM160A1Q05DH4 1040 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 CCDC40Q4G0X9 1142 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 JAG2Q9Y219 1238 aa16.74■□□□□ 0.27
SLC6A20-202ENST00000358525 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 JAK2O60674 1132 aa16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 OTUD7BQ6GQQ9 843 aa16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 EXOC1Q9NV70 894 aa16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 ME3Q16798 604 aa16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 GPAA1O43292 621 aa16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 APPBP2Q92624 585 aa16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 KRT2P35908 639 aa16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 ST5P78524 1137 aa16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 LLPHQ9BRT6 129 aaKnown RBP16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 PRR36Q9H6K5 1346 aa16.73■□□□□ 0.27
SLC6A20-202ENST00000358525 ATL3Q6DD88 541 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 FAM114A1Q8IWE2 563 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 LEO1Q8WVC0 666 aaPredicted RBP16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 PKNOX2Q96KN3 472 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 CD2BP2O95400 341 aaKnown RBP16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 MCM9Q9NXL9 1143 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 UNC13BO14795 1591 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 SSH2Q76I76 1423 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 F8W031 263 aaPredicted RBP16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 KIF20AO95235 890 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 ARMT1Q9H993 441 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 ABCC3O15438 1527 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 A0A0D9SFI3 127 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 HLA-DOAP06340 250 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 TNIP1Q15025 636 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 CROCC2H7BZ55 1655 aa16.72■□□□□ 0.27
SLC6A20-202ENST00000358525 ATP5JP18859 108 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 MATR3P43243 847 aaKnown RBP eCLIP16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 CCDC178Q5BJE1 867 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 CTAGE1Q96RT6 745 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 CLSTN2Q9H4D0 955 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 CALM1P0DP23 149 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 CALM2P0DP24 149 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 CALM3P0DP25 149 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 SIRT2Q8IXJ6 389 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 IGSF1Q8N6C5 1336 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 STX17P56962 302 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 MAP9Q49MG5 647 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 CHAMP1Q96JM3 812 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 V9GYY5 206 aaPredicted RBP16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 PUM3Q15397 648 aaKnown RBP16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 TM6SF1Q9BZW5 370 aa16.71■□□□□ 0.27
SLC6A20-202ENST00000358525 HMGB2P26583 209 aaKnown RBP16.71■□□□□ 0.26
SLC6A20-202ENST00000358525 UNC5CLQ8IV45 518 aa16.71■□□□□ 0.26
SLC6A20-202ENST00000358525 USP6P35125 1406 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 GNAQP50148 359 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 NAPAP54920 295 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 PICALMQ13492 652 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 DNAJC10Q8IXB1 793 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 PLEKHG1Q9ULL1 1385 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 PHKG2P15735 406 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 TRIM21P19474 475 aaKnown RBP16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 KRI1Q8N9T8 703 aaKnown RBP16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 PROSER3Q2NL68 480 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 NYXQ9GZU5 481 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 PDE8AO60658 829 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 MCM7P33993 719 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 ZAP70P43403 619 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 TAF3Q5VWG9 929 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 TCERG1LQ5VWI1 586 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 VPS36Q86VN1 386 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 CABP5Q9NP86 173 aa16.7■□□□□ 0.26
SLC6A20-202ENST00000358525 KIAA0754O94854 1291 aa16.69■□□□□ 0.26
SLC6A20-202ENST00000358525 PAFAH1B1P43034 410 aa16.69■□□□□ 0.26
SLC6A20-202ENST00000358525 C8orf37Q96NL8 207 aa16.69■□□□□ 0.26
SLC6A20-202ENST00000358525 ZNF622Q969S3 477 aaKnown RBP eCLIP16.69■□□□□ 0.26
SLC6A20-202ENST00000358525 ANGEL1Q9UNK9 670 aaKnown RBP16.69■□□□□ 0.26
SLC6A20-202ENST00000358525 TAF5LO75529 589 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms