RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 RPS6KB1P23443 525 aa16.98■□□□□ 0.31
NIPAL3-203ENST00000358028 ST3GAL1Q11201 340 aa16.98■□□□□ 0.31
NIPAL3-203ENST00000358028 ME3Q16798 604 aa16.98■□□□□ 0.31
NIPAL3-203ENST00000358028 ERFEQ4G0M1 354 aa16.98■□□□□ 0.31
NIPAL3-203ENST00000358028 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
NIPAL3-203ENST00000358028 ZSCAN30Q86W11 494 aa16.98■□□□□ 0.31
NIPAL3-203ENST00000358028 BRIP1Q9BX63 1249 aa16.98■□□□□ 0.31
NIPAL3-203ENST00000358028 NYXQ9GZU5 481 aa16.98■□□□□ 0.31
NIPAL3-203ENST00000358028 SH3TC1Q8TE82 1336 aa16.98■□□□□ 0.31
NIPAL3-203ENST00000358028 PCCAP05165 728 aaPredicted RBP16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 GJB2P29033 226 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 ANKRD1Q15327 319 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 MCMDC2Q4G0Z9 681 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 TPCN1Q9ULQ1 816 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 TAF6LQ9Y6J9 622 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 F13A1P00488 732 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 TIMM10P62072 90 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 KRT32Q14532 448 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 CSPP1Q1MSJ5 1256 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 TICAM2Q86XR7 235 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 UTP14AQ9BVJ6 771 aaKnown RBP16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 MYH3P11055 1940 aa16.97■□□□□ 0.31
NIPAL3-203ENST00000358028 SLX4Q8IY92 1834 aa16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 SYCE3A1L190 88 aa16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 FOXD4L6Q3SYB3 417 aaPredicted RBP16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 FOXD4L3Q6VB84 417 aaPredicted RBP16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 CCDC129Q6ZRS4 1044 aa16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 USP48Q86UV5 1035 aa16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 C2CD5Q86YS7 1000 aa16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 SYNE4Q8N205 404 aa16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 SEC62Q99442 399 aaKnown RBP16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 PLA2G12BQ9BX93 195 aa16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 PUS3Q9BZE2 481 aaKnown RBP16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 FBXO3Q9UK99 471 aa16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 TAF1P21675 1872 aa16.96■□□□□ 0.31
NIPAL3-203ENST00000358028 A0A1B0GUL7 405 aa16.95■□□□□ 0.3
NIPAL3-203ENST00000358028 GOLIM4O00461 696 aa16.95■□□□□ 0.3
NIPAL3-203ENST00000358028 LETM1O95202 739 aaPredicted RBP16.95■□□□□ 0.3
NIPAL3-203ENST00000358028 PDE6BP35913 854 aa16.95■□□□□ 0.3
NIPAL3-203ENST00000358028 COL9A3Q14050 684 aaPredicted RBP16.95■□□□□ 0.3
NIPAL3-203ENST00000358028 CCDC57Q2TAC2 916 aa16.95■□□□□ 0.3
NIPAL3-203ENST00000358028 CHGBP05060 677 aa16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 TOB2Q14106 344 aaPredicted RBP16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 NECAB1Q8N987 351 aa16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 TSPY26PQ9H489 355 aa16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 GDPD2Q9HCC8 539 aa16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 HELLSQ9NRZ9 838 aa16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 CEP126Q9P2H0 1117 aa16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 TRMT112Q9UI30 125 aaKnown RBP16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 TCHHQ07283 1943 aa16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 H0YIN7 160 aa16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 IFIT1P09914 478 aaKnown RBP16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 ZBTB38Q8NAP3 1195 aaPredicted RBP16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 MTMR6Q9Y217 621 aa16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 CNPY2Q9Y2B0 182 aa16.94■□□□□ 0.3
NIPAL3-203ENST00000358028 CDHR2Q9BYE9 1310 aa16.93■□□□□ 0.3
NIPAL3-203ENST00000358028 GADD45BO75293 160 aaPredicted RBP16.93■□□□□ 0.3
NIPAL3-203ENST00000358028 CSF1RP07333 972 aa16.93■□□□□ 0.3
NIPAL3-203ENST00000358028 C3orf67Q6ZVT6 689 aa16.93■□□□□ 0.3
NIPAL3-203ENST00000358028 FAM184AQ8NB25 1140 aa16.93■□□□□ 0.3
NIPAL3-203ENST00000358028 FAM89AQ96GI7 184 aa16.93■□□□□ 0.3
NIPAL3-203ENST00000358028 TCEANC2Q96MN5 208 aa16.93■□□□□ 0.3
NIPAL3-203ENST00000358028 KLRG2A4D1S0 409 aaPredicted RBP16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 SRGNP10124 158 aa16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 UBE2HP62256 183 aa16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 ZMYM1Q5SVZ6 1142 aa16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 NEK1Q96PY6 1258 aa16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 PIM2Q9P1W9 311 aa16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 BCS1LQ9Y276 419 aa16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 LAMA4Q16363 1823 aa16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 HCLS1P14317 486 aaPredicted RBP16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 MCM5P33992 734 aa16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 CCDC183Q5T5S1 534 aa16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 AKAP2Q9Y2D5 859 aa16.92■□□□□ 0.3
NIPAL3-203ENST00000358028 CYP21A2P08686 494 aa16.91■□□□□ 0.3
NIPAL3-203ENST00000358028 MSNP26038 577 aaKnown RBP16.91■□□□□ 0.3
NIPAL3-203ENST00000358028 UVSSAQ2YD98 709 aa16.91■□□□□ 0.3
NIPAL3-203ENST00000358028 ZNF622Q969S3 477 aaKnown RBP eCLIP16.91■□□□□ 0.3
NIPAL3-203ENST00000358028 RNF113AO15541 343 aaKnown RBP16.9■□□□□ 0.3
NIPAL3-203ENST00000358028 IFIT5Q13325 482 aaKnown RBP16.9■□□□□ 0.3
NIPAL3-203ENST00000358028 CRY2Q49AN0 593 aa16.9■□□□□ 0.3
NIPAL3-203ENST00000358028 DALRD3Q5D0E6 543 aaKnown RBP16.9■□□□□ 0.3
NIPAL3-203ENST00000358028 TAF7LQ5H9L4 462 aa16.9■□□□□ 0.3
NIPAL3-203ENST00000358028 DSCC1Q9BVC3 393 aa16.9■□□□□ 0.3
NIPAL3-203ENST00000358028 NOL7Q9UMY1 257 aaKnown RBP16.9■□□□□ 0.3
NIPAL3-203ENST00000358028 FER1L6Q2WGJ9 1857 aa16.9■□□□□ 0.3
NIPAL3-203ENST00000358028 CCDC88AQ3V6T2 1871 aa16.9■□□□□ 0.3
NIPAL3-203ENST00000358028 COL4A1P02462 1669 aa16.9■□□□□ 0.3
NIPAL3-203ENST00000358028 VPS37CA5D8V6 355 aaPredicted RBP16.89■□□□□ 0.3
NIPAL3-203ENST00000358028 DTNBO60941 627 aa16.89■□□□□ 0.3
NIPAL3-203ENST00000358028 PDCP20941 246 aa16.89■□□□□ 0.3
NIPAL3-203ENST00000358028 CCDC158Q5M9N0 1113 aa16.89■□□□□ 0.3
NIPAL3-203ENST00000358028 SLC10A5Q5PT55 438 aa16.89■□□□□ 0.3
NIPAL3-203ENST00000358028 TTC39AQ5SRH9 613 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms