RNA–Protein interactions for RNA: ENST00000356825.8

SMAD2-202, Transcript of SMAD family member 2, humanhuman

TSL 1 (best) BASIC

Gene SMAD2, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-202ENST00000356825 ARAP1Q96P48 1450 aa16.2■□□□□ 0.18
SMAD2-202ENST00000356825 NOP56O00567 594 aaKnown RBP16.19■□□□□ 0.18
SMAD2-202ENST00000356825 ANKRD13DQ6ZTN6 518 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 RPUSD2Q8IZ73 545 aaKnown RBP16.19■□□□□ 0.18
SMAD2-202ENST00000356825 ATP5DP30049 168 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 KRT83P78385 493 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 DAPK3O43293 454 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 KRT86O43790 486 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 RAB11FIP4Q86YS3 637 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 GPR161Q8N6U8 529 aaKnown RBP16.19■□□□□ 0.18
SMAD2-202ENST00000356825 DHX29Q7Z478 1369 aaKnown RBP16.19■□□□□ 0.18
SMAD2-202ENST00000356825 TFCP2L1Q9NZI6 479 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 DYNC1I1O14576 645 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 EYA3Q99504 573 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 SELENOSQ9BQE4 189 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 TUBB4BP68371 445 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 TTC36A6NLP5 189 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 UBXN1Q04323 297 aa16.19■□□□□ 0.18
SMAD2-202ENST00000356825 RBM26Q5T8P6 1007 aaKnown RBP16.19■□□□□ 0.18
SMAD2-202ENST00000356825 CCDC125Q86Z20 511 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 SPAG1Q07617 926 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 SEL1L2Q5TEA6 688 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 MTRF1LQ9UGC7 380 aaKnown RBP16.18■□□□□ 0.18
SMAD2-202ENST00000356825 KLF18A0A0U1RQI7 1052 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 SRGAP1Q7Z6B7 1085 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 NIP7Q9Y221 180 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMAD2-202ENST00000356825 ASXL1Q8IXJ9 1541 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 EPB41P11171 864 aaKnown RBP16.18■□□□□ 0.18
SMAD2-202ENST00000356825 GPATCH11Q8N954 259 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 NCOA1Q15788 1441 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 UBAP1LF5GYI3 381 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 RSPH3Q86UC2 560 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 LARP6Q9BRS8 491 aaKnown RBP16.18■□□□□ 0.18
SMAD2-202ENST00000356825 IVLP07476 585 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 CCDC25Q86WR0 208 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 MTUS1Q9ULD2 1270 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 ARHGEF10LQ9HCE6 1279 aa16.18■□□□□ 0.18
SMAD2-202ENST00000356825 RAB3GAP1Q15042 981 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 FNBP1Q96RU3 617 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 DCAF17Q5H9S7 520 aaPredicted RBP16.17■□□□□ 0.18
SMAD2-202ENST00000356825 SPOUT1Q5T280 376 aaKnown RBP16.17■□□□□ 0.18
SMAD2-202ENST00000356825 RBM28Q9NW13 759 aaKnown RBP16.17■□□□□ 0.18
SMAD2-202ENST00000356825 TFIP11Q9UBB9 837 aaKnown RBP16.17■□□□□ 0.18
SMAD2-202ENST00000356825 RIOK3O14730 519 aaKnown RBP16.17■□□□□ 0.18
SMAD2-202ENST00000356825 M0QZ92 97 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 ATP2C2O75185 946 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 LDHBP07195 334 aaKnown RBP16.17■□□□□ 0.18
SMAD2-202ENST00000356825 SP4Q02446 784 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 ZCRB1Q8TBF4 217 aaKnown RBP16.17■□□□□ 0.18
SMAD2-202ENST00000356825 RBM17Q96I25 401 aaKnown RBP16.17■□□□□ 0.18
SMAD2-202ENST00000356825 STIM2Q9P246 746 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 HMGB1P1B2RPK0 211 aaPredicted RBP16.17■□□□□ 0.18
SMAD2-202ENST00000356825 MNAT1P51948 309 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 MCMDC2Q4G0Z9 681 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 NME9Q86XW9 330 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 MAGEB6Q8N7X4 407 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 ZSWIM4Q9H7M6 989 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 RPL13P26373 211 aaKnown RBP16.17■□□□□ 0.18
SMAD2-202ENST00000356825 ITIH3Q06033 890 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 IFT74Q96LB3 600 aa16.17■□□□□ 0.18
SMAD2-202ENST00000356825 ARID4AP29374 1257 aaPredicted RBP16.16■□□□□ 0.18
SMAD2-202ENST00000356825 MCM7P33993 719 aa16.16■□□□□ 0.18
SMAD2-202ENST00000356825 KRT79Q5XKE5 535 aa16.16■□□□□ 0.18
SMAD2-202ENST00000356825 TEX14Q8IWB6 1497 aa16.16■□□□□ 0.18
SMAD2-202ENST00000356825 NSMCE1Q8WV22 266 aa16.16■□□□□ 0.18
SMAD2-202ENST00000356825 FANCAO15360 1455 aa16.16■□□□□ 0.18
SMAD2-202ENST00000356825 GTF2F1P35269 517 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMAD2-202ENST00000356825 IPO4Q8TEX9 1081 aaKnown RBP16.16■□□□□ 0.18
SMAD2-202ENST00000356825 HOOK2Q96ED9 719 aa16.16■□□□□ 0.18
SMAD2-202ENST00000356825 ANKRD2Q9GZV1 360 aa16.16■□□□□ 0.18
SMAD2-202ENST00000356825 DTHD1Q6ZMT9 781 aa16.16■□□□□ 0.18
SMAD2-202ENST00000356825 CIB2O75838 187 aa16.16■□□□□ 0.18
SMAD2-202ENST00000356825 STRN3Q13033 797 aa16.16■□□□□ 0.18
SMAD2-202ENST00000356825 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
SMAD2-202ENST00000356825 SEC62Q99442 399 aaKnown RBP16.15■□□□□ 0.18
SMAD2-202ENST00000356825 CFAP74Q9C0B2 1584 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 VIMP08670 466 aaKnown RBP16.15■□□□□ 0.18
SMAD2-202ENST00000356825 MCM9Q9NXL9 1143 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 PARP1P09874 1014 aaKnown RBP16.15■□□□□ 0.18
SMAD2-202ENST00000356825 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 TRPC3Q13507 836 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 PI4KAP2A4QPH2 592 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 PI4KAP1Q8N8J0 262 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 GJA3Q9Y6H8 435 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 IVNS1ABPQ9Y6Y0 642 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 CTAGE15A4D2H0 777 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 CTAGE8P0CG41 777 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 RARSP54136 660 aaKnown RBP16.15■□□□□ 0.18
SMAD2-202ENST00000356825 CTAGE6Q86UF2 777 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 CTAGE4Q8IX94 777 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 CCDC121Q6ZUS5 278 aa16.15■□□□□ 0.18
SMAD2-202ENST00000356825 SETDB1Q15047 1291 aa16.14■□□□□ 0.17
SMAD2-202ENST00000356825 UAP1Q16222 522 aaPredicted RBP16.14■□□□□ 0.17
SMAD2-202ENST00000356825 SCAF11Q99590 1463 aaKnown RBP16.14■□□□□ 0.17
SMAD2-202ENST00000356825 TBC1D9Q6ZT07 1266 aa16.14■□□□□ 0.17
SMAD2-202ENST00000356825 PAG1Q9NWQ8 432 aa16.14■□□□□ 0.17
SMAD2-202ENST00000356825 CHPF2Q9P2E5 772 aa16.14■□□□□ 0.17
SMAD2-202ENST00000356825 CCDC89Q8N998 374 aa16.14■□□□□ 0.17
SMAD2-202ENST00000356825 TNPO1Q92973 898 aaKnown RBP16.14■□□□□ 0.17
SMAD2-202ENST00000356825 ABCC1P33527 1531 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms