RNA–Protein interactions for RNA: ENST00000356175.7

NF1-201, Transcript of neurofibromin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NF1, Length 12,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-201ENST00000356175 TTLL11Q8NHH1 800 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 GPT2Q8TD30 523 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 LBHD1Q9BQE6 289 aaPredicted RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 ACBD5Q5T8D3 534 aaPredicted RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 SYNJ1O43426 1573 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 PTPROQ16827 1216 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 HELLSQ9NRZ9 838 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 CFDP1Q9UEE9 299 aaPredicted RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 SCN2AQ99250 2005 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 MAP7D3Q8IWC1 876 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 SMARCC2Q8TAQ2 1214 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 RASAL2Q9UJF2 1139 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 ZNF638Q14966 1978 aaKnown RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 TIAM1Q13009 1591 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 TOP2AP11388 1531 aaKnown RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 SMAPO00193 183 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 HSP90AA5PQ58FG0 334 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 BCAS4Q8TDM0 211 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 LUC7LQ9NQ29 371 aaKnown RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 ACTN2P35609 894 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 SETDB1Q15047 1291 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 CACNA1CQ13936 2221 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 DNAJC6O75061 913 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 EXOSC9Q06265 439 aaKnown RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 UAP1Q16222 522 aaPredicted RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 CBX8Q9HC52 389 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 SPG7Q9UQ90 795 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 STAMBPO95630 424 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 TTC14Q96N46 770 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 TMEM63CQ9P1W3 806 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 HIP1RO75146 1068 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 FKBP5Q13451 457 aaPredicted RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 CCDC155Q8N6L0 562 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 ELF1P32519 619 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 TPD52P55327 224 aaPredicted RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 TDRD12Q587J7 1177 aaKnown RBP7.69□□□□□ -1.18
NF1-201ENST00000356175 HAUS1Q96CS2 278 aa7.69□□□□□ -1.18
NF1-201ENST00000356175 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.69□□□□□ -1.18
NF1-201ENST00000356175 TRPA1O75762 1119 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 NBPF20Q3BBV1 942 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 C16orf87Q6PH81 154 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 MRPS25P82663 173 aaKnown RBP7.68□□□□□ -1.18
NF1-201ENST00000356175 CPLX2Q6PUV4 134 aaKnown RBP7.68□□□□□ -1.18
NF1-201ENST00000356175 DACH1Q9UI36 760 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.68□□□□□ -1.18
NF1-201ENST00000356175 DACT1Q9NYF0 836 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 MX2P20592 715 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 PKP1Q13835 747 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 TCEANC2Q96MN5 208 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 FBXO2Q9UK22 296 aaPredicted RBP7.68□□□□□ -1.18
NF1-201ENST00000356175 A0A087WWV3 80 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 SUPT3HO75486 399 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 KMT5BQ4FZB7 885 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 BZW2Q9Y6E2 419 aaKnown RBP7.68□□□□□ -1.18
NF1-201ENST00000356175 A0A087WUV0 522 aaPredicted RBP7.68□□□□□ -1.18
NF1-201ENST00000356175 SPECC1L-ADORA2AF8WAN1 911 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 PPP1R12AO14974 1030 aaPredicted RBP7.68□□□□□ -1.18
NF1-201ENST00000356175 GFAPP14136 432 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 JMYQ8N9B5 988 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 RUNDC1Q96C34 613 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 RNF40O75150 1001 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 IGHMBP2P38935 993 aaKnown RBP7.68□□□□□ -1.18
NF1-201ENST00000356175 WDR78Q5VTH9 848 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 LRRC2Q9BYS8 371 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 EID1Q9Y6B2 187 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 H0Y3Z8 333 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 POLR3DP05423 398 aaPredicted RBP7.68□□□□□ -1.18
NF1-201ENST00000356175 ABCD1P33897 745 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 ETAA1Q9NY74 926 aa7.68□□□□□ -1.18
NF1-201ENST00000356175 PPFIA2O75334 1257 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 G3BP1Q13283 466 aaKnown RBP eCLIP7.67□□□□□ -1.18
NF1-201ENST00000356175 CCDC144CPQ8IYA2 1237 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 KIAA2013Q8IYS2 634 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 POLD4Q9HCU8 107 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 TMX3Q96JJ7 454 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 VCX3BQ9H321 246 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 NCOA2Q15596 1464 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 SF3B2Q13435 895 aaKnown RBP7.67□□□□□ -1.18
NF1-201ENST00000356175 NAA16Q6N069 864 aaPredicted RBP7.67□□□□□ -1.18
NF1-201ENST00000356175 CCDC63Q8NA47 563 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 EPC1Q9H2F5 836 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 CTNNA3Q9UI47 895 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 PAIP2BQ9ULR5 123 aaKnown RBP7.67□□□□□ -1.18
NF1-201ENST00000356175 ZPR1O75312 459 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 SF3B3Q15393 1217 aaKnown RBP7.67□□□□□ -1.18
NF1-201ENST00000356175 B4GALNT2Q8NHY0 566 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 SMC6Q96SB8 1091 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 LMBRD1Q9NUN5 540 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 PPP6R1Q9UPN7 881 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 PCP4L1A6NKN8 68 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 ZFXP17010 805 aaPredicted RBP7.67□□□□□ -1.18
NF1-201ENST00000356175 CCDC144BQ3MJ40 725 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 ZCRB1Q8TBF4 217 aaKnown RBP7.67□□□□□ -1.18
NF1-201ENST00000356175 PPP1R9BQ96SB3 815 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 PPP1R9AQ9ULJ8 1098 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 GUCY2CP25092 1073 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 CCDC110Q8TBZ0 833 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 CACTINQ8WUQ7 758 aaKnown RBP7.67□□□□□ -1.18
NF1-201ENST00000356175 NEUROD6Q96NK8 337 aa7.67□□□□□ -1.18
NF1-201ENST00000356175 DDX19AQ9NUU7 478 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms