RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 RALYLQ86SE5 291 aaKnown RBP17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 ACSBG1Q96GR2 724 aa17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 PIH1D3Q9NQM4 214 aaKnown RBP17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 DENND2AQ9ULE3 1009 aa17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 SPEF2Q9C093 1822 aa17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 KIAA2012Q0VF49 1180 aa17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 C17orf53Q8N3J3 647 aaPredicted RBP17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 FAM200AQ8TCP9 573 aa17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 USP28Q96RU2 1077 aa17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 CARMIL3Q8ND23 1372 aa17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
VIPAS39-202ENST00000343765 PDE8AO60658 829 aa17.47■□□□□ 0.39
VIPAS39-202ENST00000343765 ADD1P35611 737 aaKnown RBP17.47■□□□□ 0.39
VIPAS39-202ENST00000343765 SALL1Q9NSC2 1324 aa17.47■□□□□ 0.39
VIPAS39-202ENST00000343765 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
VIPAS39-202ENST00000343765 PDE8BO95263 885 aa17.47■□□□□ 0.39
VIPAS39-202ENST00000343765 VGLL2Q8N8G2 317 aa17.47■□□□□ 0.39
VIPAS39-202ENST00000343765 ADAMTS2O95450 1211 aa17.46■□□□□ 0.39
VIPAS39-202ENST00000343765 FDPSP14324 419 aaKnown RBP17.46■□□□□ 0.39
VIPAS39-202ENST00000343765 CCDC102BQ68D86 513 aa17.46■□□□□ 0.39
VIPAS39-202ENST00000343765 MB21D2Q8IYB1 491 aaPredicted RBP17.46■□□□□ 0.39
VIPAS39-202ENST00000343765 ADD2P35612 726 aa17.46■□□□□ 0.39
VIPAS39-202ENST00000343765 ANTXR2P58335 489 aa17.46■□□□□ 0.39
VIPAS39-202ENST00000343765 NCOA7Q8NI08 942 aa17.46■□□□□ 0.39
VIPAS39-202ENST00000343765 NWD2Q9ULI1 1742 aa17.46■□□□□ 0.38
VIPAS39-202ENST00000343765 LRP6O75581 1613 aa17.46■□□□□ 0.38
VIPAS39-202ENST00000343765 SASS6Q6UVJ0 657 aa17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 CBX8Q9HC52 389 aa17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 GJB4Q9NTQ9 266 aa17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 ZNF532Q9HCE3 1301 aa17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 ILDR1Q86SU0 546 aaPredicted RBP17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 CCAR1Q8IX12 1150 aaKnown RBP17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 DNAJC25Q9H1X3 360 aa17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 WWC3Q9ULE0 1092 aa17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 IL6STP40189 918 aaPredicted RBP17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 ME1P48163 572 aa17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 NKX2-3Q8TAU0 364 aa17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 GOLPH3LQ9H4A5 285 aa17.45■□□□□ 0.38
VIPAS39-202ENST00000343765 CPLX1O14810 134 aa17.44■□□□□ 0.38
VIPAS39-202ENST00000343765 RXRAP19793 462 aa17.44■□□□□ 0.38
VIPAS39-202ENST00000343765 DNTTIP2Q5QJE6 756 aaKnown RBP17.44■□□□□ 0.38
VIPAS39-202ENST00000343765 SUSD4Q5VX71 490 aa17.44■□□□□ 0.38
VIPAS39-202ENST00000343765 ZSCAN25Q6NSZ9 544 aa17.44■□□□□ 0.38
VIPAS39-202ENST00000343765 TBC1D10CQ8IV04 446 aa17.44■□□□□ 0.38
VIPAS39-202ENST00000343765 NBPF3Q9H094 633 aa17.44■□□□□ 0.38
VIPAS39-202ENST00000343765 HPS5Q9UPZ3 1129 aa17.44■□□□□ 0.38
VIPAS39-202ENST00000343765 ABCC12Q96J65 1359 aa17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 POLR3DP05423 398 aaPredicted RBP17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 TPM2P07951 284 aa17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 ZNF396Q96N95 335 aaPredicted RBP17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 SEC31BQ9NQW1 1179 aa17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 ORC3Q9UBD5 711 aaPredicted RBP17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 A0A087WWV3 80 aa17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 PDE6AP16499 860 aa17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 TRDNQ13061 729 aa17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 TTF1Q15361 905 aaPredicted RBP17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 PUM3Q15397 648 aaKnown RBP17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 ZNF34Q8IZ26 560 aa17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 C8orf76Q96K31 380 aa17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 RCOR1Q9UKL0 485 aa17.43■□□□□ 0.38
VIPAS39-202ENST00000343765 ERVV-1B6SEH8 477 aa17.42■□□□□ 0.38
VIPAS39-202ENST00000343765 ATP6V1AP38606 617 aa17.42■□□□□ 0.38
VIPAS39-202ENST00000343765 CCDC73Q6ZRK6 1079 aa17.42■□□□□ 0.38
VIPAS39-202ENST00000343765 RBM43Q6ZSC3 357 aaKnown RBP17.42■□□□□ 0.38
VIPAS39-202ENST00000343765 SMIM5Q71RC9 77 aa17.42■□□□□ 0.38
VIPAS39-202ENST00000343765 INCENPQ9NQS7 918 aa17.42■□□□□ 0.38
VIPAS39-202ENST00000343765 GOLGB1Q14789 3259 aaKnown RBP17.42■□□□□ 0.38
VIPAS39-202ENST00000343765 ZNF165P49910 485 aa17.41■□□□□ 0.38
VIPAS39-202ENST00000343765 CYB5R4Q7L1T6 521 aa17.41■□□□□ 0.38
VIPAS39-202ENST00000343765 LPIN2Q92539 896 aa17.41■□□□□ 0.38
VIPAS39-202ENST00000343765 ERCC4Q92889 916 aaPredicted RBP17.41■□□□□ 0.38
VIPAS39-202ENST00000343765 AIDAQ96BJ3 306 aa17.41■□□□□ 0.38
VIPAS39-202ENST00000343765 MPHOSPH8Q99549 860 aa17.41■□□□□ 0.38
VIPAS39-202ENST00000343765 CRKLP46109 303 aaKnown RBP17.41■□□□□ 0.38
VIPAS39-202ENST00000343765 EVCP57679 992 aa17.41■□□□□ 0.38
VIPAS39-202ENST00000343765 CCDC144CPQ8IYA2 1237 aa17.41■□□□□ 0.38
VIPAS39-202ENST00000343765 FSIP1Q8NA03 581 aa17.41■□□□□ 0.38
VIPAS39-202ENST00000343765 FBXW7Q969H0 707 aa17.41■□□□□ 0.38
VIPAS39-202ENST00000343765 B4E1Z4 1266 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 KCNQ4P56696 695 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 KLHL34Q8N239 644 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 SLIT2O94813 1529 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 NUP98P52948 1817 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 AKAP11Q9UKA4 1901 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 DHX16O60231 1041 aaKnown RBP17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 ARID4AP29374 1257 aaPredicted RBP17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 DDB1Q16531 1140 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 INTS5Q6P9B9 1019 aaKnown RBP17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 FBXL16Q8N461 479 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 MAGEB6Q8N7X4 407 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 PIBF1Q8WXW3 757 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 SENP2Q9HC62 589 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 CCDC87Q9NVE4 849 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 COL14A1Q05707 1796 aaKnown RBP17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 SLC5A1P13866 664 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 EIF5P55010 431 aaKnown RBP17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 RASGRF1Q13972 1273 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 UBE3CQ15386 1083 aa17.4■□□□□ 0.38
VIPAS39-202ENST00000343765 DRC7Q8IY82 874 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms