RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 OTUD7BQ6GQQ9 843 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 CCNL1Q9UK58 526 aaPredicted RBP14.92□□□□□ -0.02
VSTM4-202ENST00000332853 LDHBP07195 334 aaKnown RBP14.92□□□□□ -0.02
VSTM4-202ENST00000332853 STAT6P42226 847 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 CTDSPL2Q05D32 466 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 TRAPPC3LQ5T215 181 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 KANK3Q6NY19 840 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 TXLNBQ8N3L3 684 aa14.92□□□□□ -0.02
VSTM4-202ENST00000332853 CCDC148Q8NFR7 591 aa14.91□□□□□ -0.02
VSTM4-202ENST00000332853 SSH3Q8TE77 659 aa14.91□□□□□ -0.02
VSTM4-202ENST00000332853 FBXO3Q9UK99 471 aa14.91□□□□□ -0.02
VSTM4-202ENST00000332853 GSDMDP57764 484 aa14.91□□□□□ -0.02
VSTM4-202ENST00000332853 PALD1Q9ULE6 856 aa14.91□□□□□ -0.02
VSTM4-202ENST00000332853 A0A1B0GVL5 298 aa14.91□□□□□ -0.02
VSTM4-202ENST00000332853 PTH1RQ03431 593 aa14.91□□□□□ -0.02
VSTM4-202ENST00000332853 KBTBD3Q8NAB2 608 aa14.91□□□□□ -0.02
VSTM4-202ENST00000332853 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.91□□□□□ -0.02
VSTM4-202ENST00000332853 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.91□□□□□ -0.021e-7■■■■■ 115.4
VSTM4-202ENST00000332853 MCM7P33993 719 aa14.91□□□□□ -0.02
VSTM4-202ENST00000332853 MYL10Q9BUA6 226 aa14.91□□□□□ -0.02
VSTM4-202ENST00000332853 ERLIN1O75477 346 aa14.91□□□□□ -0.02
VSTM4-202ENST00000332853 TDRD12Q587J7 1177 aaKnown RBP14.91□□□□□ -0.02
VSTM4-202ENST00000332853 SEC62Q99442 399 aaKnown RBP14.91□□□□□ -0.02
VSTM4-202ENST00000332853 PPP1R12BO60237 982 aaPredicted RBP14.9□□□□□ -0.02
VSTM4-202ENST00000332853 WDR78Q5VTH9 848 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 CCDC87Q9NVE4 849 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 CEP152O94986 1710 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 KRT2P35908 639 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 EAF2Q96CJ1 260 aaPredicted RBP14.9□□□□□ -0.02
VSTM4-202ENST00000332853 IGSF1Q8N6C5 1336 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 GADD45BO75293 160 aaPredicted RBP14.9□□□□□ -0.02
VSTM4-202ENST00000332853 HSPA4P34932 840 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 AMPD3Q01432 767 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 CCDC178Q5BJE1 867 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 LUZP1Q86V48 1076 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 GLI2P10070 1586 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 YEATS4O95619 227 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 LMOD1P29536 600 aaPredicted RBP14.9□□□□□ -0.02
VSTM4-202ENST00000332853 PLIN2Q99541 437 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 PRDM1O75626 825 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 TRIM47Q96LD4 638 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 RTL9Q8NET4 1388 aa14.9□□□□□ -0.02
VSTM4-202ENST00000332853 TTLL12Q14166 644 aaPredicted RBP14.89□□□□□ -0.03
VSTM4-202ENST00000332853 CCDC40Q4G0X9 1142 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 APPBP2Q92624 585 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 ANKRD2Q9GZV1 360 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 A0A0D9SFI3 127 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 SSR1P43307 286 aaKnown RBP14.89□□□□□ -0.03
VSTM4-202ENST00000332853 TMEM94Q12767 1356 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 SNW1Q13573 536 aaKnown RBP14.89□□□□□ -0.03
VSTM4-202ENST00000332853 CCDC102AQ96A19 550 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 ZC3H12CQ9C0D7 883 aaKnown RBP14.89□□□□□ -0.03
VSTM4-202ENST00000332853 JAK2O60674 1132 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 TCERG1LQ5VWI1 586 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 RBSNQ9H1K0 784 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 EXOC1Q9NV70 894 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 RNF17Q9BXT8 1623 aaKnown RBP14.89□□□□□ -0.03
VSTM4-202ENST00000332853 TAF4BQ92750 862 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 N4BP3O15049 544 aa14.89□□□□□ -0.03
VSTM4-202ENST00000332853 IBTKQ9P2D0 1353 aaPredicted RBP14.88□□□□□ -0.03
VSTM4-202ENST00000332853 TRIM75PA6NK02 468 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 ERVV-2B6SEH9 535 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 KIF2AO00139 706 aaPredicted RBP14.88□□□□□ -0.03
VSTM4-202ENST00000332853 CBX1P83916 185 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 DENND2AQ9ULE3 1009 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 SAMM50Q9Y512 469 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 NEMFO60524 1076 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 LRRC24Q50LG9 513 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 CDC37L1Q7L3B6 337 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 FGFR1OPO95684 399 aaKnown RBP14.88□□□□□ -0.03
VSTM4-202ENST00000332853 CNBD1Q8NA66 436 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 MMRN2Q9H8L6 949 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 AATFQ9NY61 560 aaKnown RBP eCLIP14.88□□□□□ -0.03
VSTM4-202ENST00000332853 ZNF532Q9HCE3 1301 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 E9PCH4 1651 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 STX17P56962 302 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 PARP10Q53GL7 1025 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 CEP135Q66GS9 1140 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 TCIRG1Q13488 830 aa14.88□□□□□ -0.03
VSTM4-202ENST00000332853 UNC5CLQ8IV45 518 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 HIBADHP31937 336 aaKnown RBP14.87□□□□□ -0.03
VSTM4-202ENST00000332853 ARHGEF25Q86VW2 580 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 UFL1O94874 794 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 ERLIN2O94905 339 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 QRICH2Q9H0J4 1663 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 IQCEQ6IPM2 695 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 SPATA5Q8NB90 893 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 ZSWIM4Q9H7M6 989 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 SKILP12757 684 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 LEKR1Q6ZMV7 388 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 PHKBQ93100 1093 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 TLR7Q9NYK1 1049 aaKnown RBP14.87□□□□□ -0.03
VSTM4-202ENST00000332853 PARP3Q9Y6F1 533 aa14.87□□□□□ -0.03
VSTM4-202ENST00000332853 CAVIN2O95810 425 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 NOLC1Q14978 699 aaKnown RBP eCLIP14.86□□□□□ -0.03
VSTM4-202ENST00000332853 ZNF174Q15697 407 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 ME3Q16798 604 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 NPHP4O75161 1426 aaPredicted RBP14.86□□□□□ -0.03
VSTM4-202ENST00000332853 ATP5JP18859 108 aa14.86□□□□□ -0.03
VSTM4-202ENST00000332853 PKP1Q13835 747 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms