RNA–Protein interactions for RNA: ENST00000325558.10

PGA3-201, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGA3, Length 1,748 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-201ENST00000325558 NBPF3Q9H094 633 aa13.43□□□□□ -0.26
PGA3-201ENST00000325558 BSDC1Q9NW68 430 aaPredicted RBP13.43□□□□□ -0.26
PGA3-201ENST00000325558 C4AP0C0L4 1744 aa13.43□□□□□ -0.26
PGA3-201ENST00000325558 C4BP0C0L5 1744 aa13.43□□□□□ -0.26
PGA3-201ENST00000325558 MBD3O95983 291 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 SLC9C2Q5TAH2 1124 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 SMIM5Q71RC9 77 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 USP48Q86UV5 1035 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 MB21D2Q8IYB1 491 aaPredicted RBP13.42□□□□□ -0.26
PGA3-201ENST00000325558 ZNF274Q96GC6 653 aaPredicted RBP13.42□□□□□ -0.26
PGA3-201ENST00000325558 STRBPQ96SI9 672 aaKnown RBP13.42□□□□□ -0.26
PGA3-201ENST00000325558 GRPEL1Q9HAV7 217 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 TMEM63CQ9P1W3 806 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 WWC3Q9ULE0 1092 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 ZMYM6O95789 1325 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 WDR19Q8NEZ3 1342 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 CTDNEP1O95476 244 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 TM4SF1P30408 202 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 HSPA1LP34931 641 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 SCRN1Q12765 414 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 WASHC4Q2M389 1173 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 ZSCAN23Q3MJ62 389 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 ARHGEF1Q92888 912 aaKnown RBP13.42□□□□□ -0.26
PGA3-201ENST00000325558 CDC5LQ99459 802 aaKnown RBP13.42□□□□□ -0.26
PGA3-201ENST00000325558 BRPF3Q9ULD4 1205 aa13.42□□□□□ -0.26
PGA3-201ENST00000325558 ZNF532Q9HCE3 1301 aa13.41□□□□□ -0.26
PGA3-201ENST00000325558 DTNBO60941 627 aa13.41□□□□□ -0.26
PGA3-201ENST00000325558 GADD45BO75293 160 aaPredicted RBP13.41□□□□□ -0.26
PGA3-201ENST00000325558 PDCP20941 246 aa13.41□□□□□ -0.26
PGA3-201ENST00000325558 UBE4AQ14139 1066 aa13.41□□□□□ -0.26
PGA3-201ENST00000325558 BRF1Q92994 677 aa13.41□□□□□ -0.26
PGA3-201ENST00000325558 SRP68Q9UHB9 627 aaKnown RBP13.41□□□□□ -0.26
PGA3-201ENST00000325558 CCNL1Q9UK58 526 aaPredicted RBP13.41□□□□□ -0.26
PGA3-201ENST00000325558 MINPP1Q9UNW1 487 aa13.41□□□□□ -0.26
PGA3-201ENST00000325558 AFF2P51816 1311 aa13.41□□□□□ -0.26
PGA3-201ENST00000325558 SALL1Q9NSC2 1324 aa13.41□□□□□ -0.26
PGA3-201ENST00000325558 PDIA3P30101 505 aaKnown RBP13.4□□□□□ -0.26
PGA3-201ENST00000325558 BCAMP50895 628 aa13.4□□□□□ -0.26
PGA3-201ENST00000325558 ANTXR2P58335 489 aa13.4□□□□□ -0.26
PGA3-201ENST00000325558 FAM182BQ5T319 152 aa13.4□□□□□ -0.26
PGA3-201ENST00000325558 LARP1BQ659C4 914 aaKnown RBP13.4□□□□□ -0.26
PGA3-201ENST00000325558 CAVIN1Q6NZI2 390 aaKnown RBP13.4□□□□□ -0.26
PGA3-201ENST00000325558 NYXQ9GZU5 481 aa13.4□□□□□ -0.26
PGA3-201ENST00000325558 TRPC5Q9UL62 973 aaPredicted RBP13.4□□□□□ -0.26
PGA3-201ENST00000325558 ATP6V1DQ9Y5K8 247 aa13.4□□□□□ -0.26
PGA3-201ENST00000325558 IMMTQ16891 758 aaKnown RBP13.39□□□□□ -0.27
PGA3-201ENST00000325558 NSUN7Q8NE18 718 aaKnown RBP13.39□□□□□ -0.27
PGA3-201ENST00000325558 NKX2-3Q8TAU0 364 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 LRRC2Q9BYS8 371 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
PGA3-201ENST00000325558 CNPY2Q9Y2B0 182 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 IRS2Q9Y4H2 1338 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 JAK2O60674 1132 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 CDC37L1Q7L3B6 337 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 ANKRD18AQ8IVF6 992 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 SEPT12Q8IYM1 358 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 CELF1Q92879 486 aaKnown RBP13.39□□□□□ -0.27
PGA3-201ENST00000325558 LRRC4BQ9NT99 713 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 RBM27Q9P2N5 1060 aaKnown RBP13.39□□□□□ -0.27
PGA3-201ENST00000325558 RTCBQ9Y3I0 505 aaKnown RBP13.39□□□□□ -0.27
PGA3-201ENST00000325558 PNPLA7Q6ZV29 1317 aa13.39□□□□□ -0.27
PGA3-201ENST00000325558 CACNA1SQ13698 1873 aa13.38□□□□□ -0.27
PGA3-201ENST00000325558 WTIPA6NIX2 430 aaPredicted RBP13.38□□□□□ -0.27
PGA3-201ENST00000325558 PATL2C9JE40 543 aaKnown RBP13.38□□□□□ -0.27
PGA3-201ENST00000325558 GNPATO15228 680 aa13.38□□□□□ -0.27
PGA3-201ENST00000325558 IDH1O75874 414 aaKnown RBP13.38□□□□□ -0.27
PGA3-201ENST00000325558 APOBRQ0VD83 1088 aa13.38□□□□□ -0.27
PGA3-201ENST00000325558 FBXO33Q7Z6M2 555 aa13.38□□□□□ -0.27
PGA3-201ENST00000325558 SETDB2Q96T68 719 aa13.38□□□□□ -0.27
PGA3-201ENST00000325558 PANK2Q9BZ23 570 aa13.38□□□□□ -0.27
PGA3-201ENST00000325558 GDPD2Q9HCC8 539 aa13.38□□□□□ -0.27
PGA3-201ENST00000325558 TIAM2Q8IVF5 1701 aa13.37□□□□□ -0.27
PGA3-201ENST00000325558 COL1A1P02452 1464 aaPredicted RBP13.37□□□□□ -0.27
PGA3-201ENST00000325558 ZNF213O14771 459 aa13.37□□□□□ -0.27
PGA3-201ENST00000325558 RPS8P62241 208 aaKnown RBP13.37□□□□□ -0.27
PGA3-201ENST00000325558 DNM1Q05193 864 aaKnown RBP13.37□□□□□ -0.27
PGA3-201ENST00000325558 MAP3K12Q12852 859 aa13.37□□□□□ -0.27
PGA3-201ENST00000325558 STK3Q13188 491 aa13.37□□□□□ -0.27
PGA3-201ENST00000325558 FAM84BQ96KN1 310 aaPredicted RBP13.37□□□□□ -0.27
PGA3-201ENST00000325558 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
PGA3-201ENST00000325558 HPS5Q9UPZ3 1129 aa13.37□□□□□ -0.27
PGA3-201ENST00000325558 TNRC6CQ9HCJ0 1690 aaKnown RBP13.37□□□□□ -0.27
PGA3-201ENST00000325558 ELP1O95163 1332 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
PGA3-201ENST00000325558 GSG1L2A8MUP6 293 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 ZPR1O75312 459 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 MCM5P33992 734 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 UBE2HP62256 183 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 TPTE2Q6XPS3 522 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 RGS22Q8NE09 1264 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 NCOA7Q8NI08 942 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 NLRP3Q96P20 1036 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
PGA3-201ENST00000325558 TACC3Q9Y6A5 838 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 BRWD3Q6RI45 1802 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 FDPSP14324 419 aaKnown RBP13.36□□□□□ -0.27
PGA3-201ENST00000325558 ADRA2BP18089 450 aa13.36□□□□□ -0.27
PGA3-201ENST00000325558 ADD1P35611 737 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms