RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 GLI3P10071 1580 aa18.2■□□□□ 0.5
SHROOM1-201ENST00000319854 SMTNL1A8MU46 457 aa18.2■□□□□ 0.5
SHROOM1-201ENST00000319854 CCDC192P0DO97 292 aa18.2■□□□□ 0.5
SHROOM1-201ENST00000319854 OTUD7BQ6GQQ9 843 aa18.2■□□□□ 0.5
SHROOM1-201ENST00000319854 BICD2Q8TD16 824 aa18.2■□□□□ 0.5
SHROOM1-201ENST00000319854 HELLSQ9NRZ9 838 aa18.2■□□□□ 0.5
SHROOM1-201ENST00000319854 DENND2AQ9ULE3 1009 aa18.2■□□□□ 0.5
SHROOM1-201ENST00000319854 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
SHROOM1-201ENST00000319854 SH3TC1Q8TE82 1336 aa18.19■□□□□ 0.5
SHROOM1-201ENST00000319854 KIF18AQ8NI77 898 aa18.19■□□□□ 0.5
SHROOM1-201ENST00000319854 AKAP2Q9Y2D5 859 aa18.19■□□□□ 0.5
SHROOM1-201ENST00000319854 DACT1Q9NYF0 836 aa18.19■□□□□ 0.5
SHROOM1-201ENST00000319854 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.19■□□□□ 0.5
SHROOM1-201ENST00000319854 MORC2Q9Y6X9 1032 aaPredicted RBP18.19■□□□□ 0.5
SHROOM1-201ENST00000319854 V9GYY5 206 aaPredicted RBP18.19■□□□□ 0.5
SHROOM1-201ENST00000319854 ANKRD18BA2A2Z9 1011 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 MCAMP43121 646 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 GABPB1Q06547 395 aaPredicted RBP18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 TSGA10IPQ3SY00 556 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 FAM200AQ8TCP9 573 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 TEX13AQ9BXU3 409 aaPredicted RBP18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 IQSEC3Q9UPP2 1182 aaPredicted RBP18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 PTPDC1A2A3K4 754 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 CIAO1O76071 339 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 PIP4K2BP78356 416 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 SLC9C2Q5TAH2 1124 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 ZSCAN25Q6NSZ9 544 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 DRC7Q8IY82 874 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 FGAP02671 866 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 RXRAP19793 462 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 CTSWP56202 376 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 TYRO3Q06418 890 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 FBXW7Q969H0 707 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 GPR108Q9NPR9 543 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 GJB4Q9NTQ9 266 aa18.18■□□□□ 0.5
SHROOM1-201ENST00000319854 PHKA1P46020 1223 aa18.17■□□□□ 0.5
SHROOM1-201ENST00000319854 TERF2Q15554 542 aa18.17■□□□□ 0.5
SHROOM1-201ENST00000319854 AEBP2Q6ZN18 517 aaPredicted RBP18.17■□□□□ 0.5
SHROOM1-201ENST00000319854 ZNF592Q92610 1267 aa18.17■□□□□ 0.5
SHROOM1-201ENST00000319854 CBX8Q9HC52 389 aa18.17■□□□□ 0.5
SHROOM1-201ENST00000319854 CACTINQ8WUQ7 758 aaKnown RBP18.17■□□□□ 0.5
SHROOM1-201ENST00000319854 SEC31BQ9NQW1 1179 aa18.17■□□□□ 0.5
SHROOM1-201ENST00000319854 ATP6V1AP38606 617 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 SYCP1Q15431 976 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 TAF3Q5VWG9 929 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 INCENPQ9NQS7 918 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 ST7Q9NRC1 585 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 PARP4Q9UKK3 1724 aaKnown RBP18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 GPAA1O43292 621 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 CCDC144BQ3MJ40 725 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 KMT5BQ4FZB7 885 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 CCDC144CPQ8IYA2 1237 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 LEO1Q8WVC0 666 aaPredicted RBP18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 DSCC1Q9BVC3 393 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 ANO6Q4KMQ2 910 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 CCDC112Q8NEF3 446 aa18.16■□□□□ 0.5
SHROOM1-201ENST00000319854 UBN2Q6ZU65 1347 aa18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 A0A087WWV3 80 aa18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 CTDNEP1O95476 244 aa18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 RIPOR2Q9Y4F9 1068 aa18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 PALLDQ8WX93 1383 aa18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 TNS2Q63HR2 1409 aa18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 USP27XA6NNY8 438 aa18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 IRX5P78411 483 aaPredicted RBP18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 ARID5BQ14865 1188 aa18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 NSUN7Q8NE18 718 aaKnown RBP18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 TRIM5Q9C035 493 aa18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 JCADQ9P266 1359 aa18.15■□□□□ 0.5
SHROOM1-201ENST00000319854 CSF1RP07333 972 aa18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 TPD52L1Q16890 204 aaPredicted RBP18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 IMMTQ16891 758 aaKnown RBP18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 NUP62CLQ9H1M0 184 aa18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 STRCQ7RTU9 1775 aa18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 NR1I2O75469 434 aa18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 ZNF75DP51815 510 aa18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 DDB1Q16531 1140 aa18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 MAP3K11Q16584 847 aa18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 BICDL1Q6ZP65 573 aa18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 PIH1D3Q9NQM4 214 aaKnown RBP18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 FOXP2O15409 715 aa18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 ERCC4Q92889 916 aaPredicted RBP18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 TNMDQ9H2S6 317 aa18.14■□□□□ 0.49
SHROOM1-201ENST00000319854 PDIA3P30101 505 aaKnown RBP18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 TRIM28Q13263 835 aaKnown RBP18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 RALYLQ86SE5 291 aaKnown RBP18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 PLA2G4DQ86XP0 818 aa18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 NKX2-3Q8TAU0 364 aa18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 KCNQ2O43526 872 aa18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 PRC1O43663 620 aa18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 POLR3DP05423 398 aaPredicted RBP18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 MAPK8IP2Q13387 824 aaPredicted RBP18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 SUSD4Q5VX71 490 aa18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 PGBD1Q96JS3 809 aa18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 ZNF215Q9UL58 517 aaPredicted RBP18.13■□□□□ 0.49
SHROOM1-201ENST00000319854 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 KLF18A0A0U1RQI7 1052 aa18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 HMGB1P09429 215 aaKnown RBP18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 CCDC102BQ68D86 513 aa18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 MPHOSPH8Q99549 860 aa18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 WWC3Q9ULE0 1092 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms