RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 DRP2Q13474 957 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 SOGA3Q5TF21 947 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 SLC39A2Q9NP94 309 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 PLXNC1O60486 1568 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 M0R2C6 588 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 CDC45O75419 566 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 RASSF9O75901 435 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 SMNDC1O75940 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
BDNF-201ENST00000314915 ZFXP17010 805 aaPredicted RBP10.6□□□□□ -0.71
BDNF-201ENST00000314915 PSMD7P51665 324 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 SMYD1Q8NB12 490 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.6□□□□□ -0.71
BDNF-201ENST00000314915 TRPC6Q9Y210 931 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 TEX14Q8IWB6 1497 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 CCDC69A6NI79 296 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 MEFVO15553 781 aaPredicted RBP10.6□□□□□ -0.71
BDNF-201ENST00000314915 TPPPO94811 219 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 TXLNAP40222 546 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 VPS53Q5VIR6 699 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 TBC1D9Q6ZT07 1266 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 SMARCC1Q92922 1105 aaPredicted RBP10.6□□□□□ -0.71
BDNF-201ENST00000314915 INTS4Q96HW7 963 aaKnown RBP10.6□□□□□ -0.71
BDNF-201ENST00000314915 ATP6V1DQ9Y5K8 247 aa10.6□□□□□ -0.71
BDNF-201ENST00000314915 TIMM44O43615 452 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 SHOX2O60902 331 aaPredicted RBP10.59□□□□□ -0.71
BDNF-201ENST00000314915 URI1O94763 535 aaPredicted RBP10.59□□□□□ -0.71
BDNF-201ENST00000314915 CCDC125Q86Z20 511 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 LZICQ8WZA0 190 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 RETREG1Q9H6L5 497 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 GPCPD1Q9NPB8 672 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 TBC1D7Q9P0N9 293 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 ITM2BQ9Y287 266 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 ARID3CA6NKF2 412 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 B4DLN1 442 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 RPSAP08865 295 aaKnown RBP10.59□□□□□ -0.71
BDNF-201ENST00000314915 SCNN1BP51168 640 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 CUL4BQ13620 913 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 E2F5Q15329 346 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 PKN1Q16512 942 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 TRIM11Q96F44 468 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 HMGB1P1B2RPK0 211 aaPredicted RBP10.59□□□□□ -0.71
BDNF-201ENST00000314915 SYT1P21579 422 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 IBSPP21815 317 aaPredicted RBP10.59□□□□□ -0.71
BDNF-201ENST00000314915 ADCY1Q08828 1119 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 KIRREL3Q8IZU9 778 aa10.59□□□□□ -0.71
BDNF-201ENST00000314915 ZNHIT6Q9NWK9 470 aaKnown RBP10.59□□□□□ -0.71
BDNF-201ENST00000314915 KRT72Q14CN4 511 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 GJC2Q5T442 439 aaPredicted RBP10.58□□□□□ -0.72
BDNF-201ENST00000314915 BZW1Q7L1Q6 419 aaKnown RBP10.58□□□□□ -0.72
BDNF-201ENST00000314915 OTUD6AQ7L8S5 288 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 ERMNQ8TAM6 284 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 ZNF608Q9ULD9 1512 aaPredicted RBP10.58□□□□□ -0.72
BDNF-201ENST00000314915 DPY19L2Q6NUT2 758 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 IRF2BPLQ9H1B7 796 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 VCPKMTQ9H867 229 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 RTEL1Q9NZ71 1219 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 SMIM24O75264 130 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 GNAT1P11488 350 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 CCZ1BP86790 482 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 CCZ1P86791 482 aaPredicted RBP10.58□□□□□ -0.72
BDNF-201ENST00000314915 MVPQ14764 893 aaKnown RBP10.58□□□□□ -0.72
BDNF-201ENST00000314915 MAP3K11Q16584 847 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 OLFML1Q6UWY5 402 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 WHAMMQ8TF30 809 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 PPP1R13BQ96KQ4 1090 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 CLIC6Q96NY7 704 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 PAIP2BQ9ULR5 123 aaKnown RBP10.58□□□□□ -0.72
BDNF-201ENST00000314915 ZNF510Q9Y2H8 683 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 GAPVD1Q14C86 1478 aa10.58□□□□□ -0.72
BDNF-201ENST00000314915 LUC7L3O95232 432 aaKnown RBP10.57□□□□□ -0.72
BDNF-201ENST00000314915 KIF4AO95239 1232 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 USP5P45974 858 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 MYBPC3Q14896 1274 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 TAF7Q15545 349 aaPredicted RBP10.57□□□□□ -0.72
BDNF-201ENST00000314915 SKIDA1Q1XH10 827 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 SARM1Q6SZW1 724 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 CHAMP1Q96JM3 812 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 LUC7LQ9NQ29 371 aaKnown RBP10.57□□□□□ -0.72
BDNF-201ENST00000314915 SAMD9Q5K651 1589 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 ANKRD50Q9ULJ7 1429 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 SMARCA5O60264 1052 aaPredicted RBP10.57□□□□□ -0.72
BDNF-201ENST00000314915 TRIM21P19474 475 aaKnown RBP10.57□□□□□ -0.72
BDNF-201ENST00000314915 CCDC144BQ3MJ40 725 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 RSRC2Q7L4I2 434 aaKnown RBP10.57□□□□□ -0.72
BDNF-201ENST00000314915 CCDC144CPQ8IYA2 1237 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 BCAS4Q8TDM0 211 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 MPHOSPH8Q99549 860 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 BRD8Q9H0E9 1235 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 TUBA8Q9NY65 449 aaPredicted RBP10.57□□□□□ -0.72
BDNF-201ENST00000314915 FAM135AQ9P2D6 1515 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 NUCB1Q02818 461 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 BEND6Q5SZJ8 279 aaPredicted RBP10.57□□□□□ -0.72
BDNF-201ENST00000314915 DZIP1Q86YF9 867 aaKnown RBP10.57□□□□□ -0.72
BDNF-201ENST00000314915 CCDC146Q8IYE0 955 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 SYCP3Q8IZU3 236 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 ACTR5Q9H9F9 607 aaPredicted RBP10.57□□□□□ -0.72
BDNF-201ENST00000314915 TPCN1Q9ULQ1 816 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 LRRC10BA6NIK2 292 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 SLC27A2O14975 620 aa10.57□□□□□ -0.72
BDNF-201ENST00000314915 SAPCD2Q86UD0 394 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms