RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 ADALQ6DHV7 355 aa11.27□□□□□ -0.6
LSMEM1-201ENST00000312849 FSIP1Q8NA03 581 aa11.27□□□□□ -0.6
LSMEM1-201ENST00000312849 ZBTB38Q8NAP3 1195 aaPredicted RBP11.27□□□□□ -0.6
LSMEM1-201ENST00000312849 NCOA7Q8NI08 942 aa11.27□□□□□ -0.6
LSMEM1-201ENST00000312849 KCNG4Q8TDN1 519 aa11.27□□□□□ -0.6
LSMEM1-201ENST00000312849 MRPS27Q92552 414 aaKnown RBP11.27□□□□□ -0.6
LSMEM1-201ENST00000312849 USP28Q96RU2 1077 aa11.27□□□□□ -0.6
LSMEM1-201ENST00000312849 PUS3Q9BZE2 481 aaKnown RBP11.27□□□□□ -0.6
LSMEM1-201ENST00000312849 CLIP2Q9UDT6 1046 aa11.27□□□□□ -0.6
LSMEM1-201ENST00000312849 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 TOGARAM1Q9Y4F4 1720 aa11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 ME1P48163 572 aa11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 SNW1Q13573 536 aaKnown RBP11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 DHX8Q14562 1220 aaKnown RBP11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 TTF1Q15361 905 aaPredicted RBP11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 HSP90AB3PQ58FF7 597 aa11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 RALYLQ86SE5 291 aaKnown RBP11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 CEP57L1Q8IYX8 460 aa11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 C17orf53Q8N3J3 647 aaPredicted RBP11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 C8orf76Q96K31 380 aa11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 NCOA5Q9HCD5 579 aaKnown RBP11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 TMOD3Q9NYL9 352 aa11.27□□□□□ -0.61
LSMEM1-201ENST00000312849 SOS2Q07890 1332 aaPredicted RBP11.26□□□□□ -0.61
LSMEM1-201ENST00000312849 BECN2A8MW95 431 aa11.26□□□□□ -0.61
LSMEM1-201ENST00000312849 PRC1O43663 620 aa11.26□□□□□ -0.61
LSMEM1-201ENST00000312849 CEBPZQ03701 1054 aaKnown RBP11.26□□□□□ -0.61
LSMEM1-201ENST00000312849 BRINP3Q76B58 766 aa11.26□□□□□ -0.61
LSMEM1-201ENST00000312849 MB21D2Q8IYB1 491 aaPredicted RBP11.26□□□□□ -0.61
LSMEM1-201ENST00000312849 GOLPH3LQ9H4A5 285 aa11.26□□□□□ -0.61
LSMEM1-201ENST00000312849 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
LSMEM1-201ENST00000312849 C4AP0C0L4 1744 aa11.26□□□□□ -0.61
LSMEM1-201ENST00000312849 C4BP0C0L5 1744 aa11.26□□□□□ -0.61
LSMEM1-201ENST00000312849 ATRNO75882 1429 aa11.26□□□□□ -0.61
LSMEM1-201ENST00000312849 ZNF213O14771 459 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 STARD3NLO95772 234 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 FGAP02671 866 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 FDPSP14324 419 aaKnown RBP11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 ATP2B3Q16720 1220 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 SLFNL1Q499Z3 407 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 TTLL5Q6EMB2 1281 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 FMR1NBQ8N0W7 255 aaPredicted RBP11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 ITGB4P16144 1822 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 MAP3K15Q6ZN16 1313 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 KLF18A0A0U1RQI7 1052 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 CPLX1O14810 134 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 ADORA1P30542 326 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 FOSBP53539 338 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 TRDNQ13061 729 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 STK38Q15208 465 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 SYCP1Q15431 976 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 SF3A1Q15459 793 aaKnown RBP11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 GIGYF2Q6Y7W6 1299 aaKnown RBP11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 ILDR1Q86SU0 546 aaPredicted RBP11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 FBXO18Q8NFZ0 1043 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 BPIFA3Q9BQP9 254 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 ORC3Q9UBD5 711 aaPredicted RBP11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 PCDHA7Q9UN72 937 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 PAXBP1Q9Y5B6 917 aa11.25□□□□□ -0.61
LSMEM1-201ENST00000312849 GOLGA8BA8MQT2 603 aa11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 SMTNL1A8MU46 457 aa11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 CDKL5O76039 1030 aa11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 ZAP70P43403 619 aa11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 ZRSR1Q15695 479 aaKnown RBP11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 METTL24Q5JXM2 366 aa11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 SYNE3Q6ZMZ3 975 aa11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 C11orf57Q6ZUT1 292 aaPredicted RBP11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 LINC00301Q8NCQ3 95 aa11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 CCDC94Q9BW85 323 aaPredicted RBP11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 RIPOR2Q9Y4F9 1068 aa11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 ARAP2Q8WZ64 1704 aa11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 RIC1Q4ADV7 1423 aa11.24□□□□□ -0.61
LSMEM1-201ENST00000312849 A0A0G2JLW4 131 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 ANKRD18BA2A2Z9 1011 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 SPTLC2O15270 562 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 FOXP2O15409 715 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 GPAA1O43292 621 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 CTIFO43310 598 aaKnown RBP11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 UQCRFS1P1P0C7P4 283 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 GSDMDP57764 484 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 EVA1CP58658 441 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 TPM4P67936 248 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 RBM6P78332 1123 aaKnown RBP11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 GUCY1B3Q02153 619 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 UBE3CQ15386 1083 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 CPLX2Q6PUV4 134 aaKnown RBP11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 CHST3Q7LGC8 479 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 SDF4Q9BRK5 362 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 IMPACTQ9P2X3 320 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 NRBP1Q9UHY1 535 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 HPS5Q9UPZ3 1129 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 ZMYM6O95789 1325 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 CHD4Q14839 1912 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 RIOK3O14730 519 aaKnown RBP11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 ADD2P35612 726 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 LRRC8AQ8IWT6 810 aa11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 DHX40Q8IX18 779 aaKnown RBP11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 CACTINQ8WUQ7 758 aaKnown RBP11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 FTOQ9C0B1 505 aaKnown RBP eCLIP11.23□□□□□ -0.61
LSMEM1-201ENST00000312849 KCND1Q9NSA2 647 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms