RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 IMMTQ16891 758 aaKnown RBP29.65■■■□□ 2.34
HOXB3-201ENST00000311626 ANTXR2P58335 489 aa29.64■■■□□ 2.34
HOXB3-201ENST00000311626 ENGASEQ8NFI3 743 aa29.64■■■□□ 2.34
HOXB3-201ENST00000311626 KIF3AQ9Y496 699 aa29.64■■■□□ 2.34
HOXB3-201ENST00000311626 IFIT5Q13325 482 aaKnown RBP29.64■■■□□ 2.34
HOXB3-201ENST00000311626 TMOD3Q9NYL9 352 aa29.64■■■□□ 2.34
HOXB3-201ENST00000311626 ABCC6O95255 1503 aa29.63■■■□□ 2.33
HOXB3-201ENST00000311626 RXRAP19793 462 aa29.63■■■□□ 2.33
HOXB3-201ENST00000311626 METTL24Q5JXM2 366 aa29.63■■■□□ 2.33
HOXB3-201ENST00000311626 ATG3Q9NT62 314 aa29.63■■■□□ 2.33
HOXB3-201ENST00000311626 HPS5Q9UPZ3 1129 aa29.63■■■□□ 2.33
HOXB3-201ENST00000311626 GPAA1O43292 621 aa29.62■■■□□ 2.33
HOXB3-201ENST00000311626 FAM160A1Q05DH4 1040 aa29.62■■■□□ 2.33
HOXB3-201ENST00000311626 NKX1-1Q15270 411 aaPredicted RBP29.62■■■□□ 2.33
HOXB3-201ENST00000311626 STX1AQ16623 288 aa29.62■■■□□ 2.33
HOXB3-201ENST00000311626 MAP7D2Q96T17 732 aa29.62■■■□□ 2.33
HOXB3-201ENST00000311626 GREM2Q9H772 168 aa29.62■■■□□ 2.33
HOXB3-201ENST00000311626 BCL2L12Q9HB09 334 aa29.62■■■□□ 2.33
HOXB3-201ENST00000311626 ORC3Q9UBD5 711 aaPredicted RBP29.62■■■□□ 2.33
HOXB3-201ENST00000311626 MCAMP43121 646 aa29.61■■■□□ 2.33
HOXB3-201ENST00000311626 C8orf76Q96K31 380 aa29.61■■■□□ 2.33
HOXB3-201ENST00000311626 AKAP2Q9Y2D5 859 aa29.61■■■□□ 2.33
HOXB3-201ENST00000311626 AIFM3Q96NN9 605 aa29.61■■■□□ 2.33
HOXB3-201ENST00000311626 BECN2A8MW95 431 aa29.6■■■□□ 2.33
HOXB3-201ENST00000311626 NDUFA8P51970 172 aa29.6■■■□□ 2.33
HOXB3-201ENST00000311626 MB21D2Q8IYB1 491 aaPredicted RBP29.6■■■□□ 2.33
HOXB3-201ENST00000311626 PIGBQ92521 554 aa29.6■■■□□ 2.33
HOXB3-201ENST00000311626 CTNNA3Q9UI47 895 aa29.6■■■□□ 2.33
HOXB3-201ENST00000311626 ATP2B3Q16720 1220 aa29.6■■■□□ 2.33
HOXB3-201ENST00000311626 LDHAL6AQ6ZMR3 332 aa29.6■■■□□ 2.33
HOXB3-201ENST00000311626 KIF6Q6ZMV9 814 aa29.6■■■□□ 2.33
HOXB3-201ENST00000311626 DHX40Q8IX18 779 aaKnown RBP29.6■■■□□ 2.33
HOXB3-201ENST00000311626 ZMYND15Q9H091 742 aa29.6■■■□□ 2.33
HOXB3-201ENST00000311626 COL5A2P05997 1499 aaPredicted RBP29.6■■■□□ 2.33
HOXB3-201ENST00000311626 KIF28PB7ZC32 967 aa29.59■■■□□ 2.33
HOXB3-201ENST00000311626 SF3A1Q15459 793 aaKnown RBP29.59■■■□□ 2.33
HOXB3-201ENST00000311626 APPBP2Q92624 585 aa29.59■■■□□ 2.33
HOXB3-201ENST00000311626 SDF4Q9BRK5 362 aa29.59■■■□□ 2.33
HOXB3-201ENST00000311626 NWD2Q9ULI1 1742 aa29.59■■■□□ 2.33
HOXB3-201ENST00000311626 STK38Q15208 465 aa29.59■■■□□ 2.33
HOXB3-201ENST00000311626 AOPEPQ8N6M6 819 aa29.59■■■□□ 2.33
HOXB3-201ENST00000311626 INCENPQ9NQS7 918 aa29.59■■■□□ 2.33
HOXB3-201ENST00000311626 KAT6BQ8WYB5 2073 aa29.59■■■□□ 2.33
HOXB3-201ENST00000311626 ZNF213O14771 459 aa29.58■■■□□ 2.33
HOXB3-201ENST00000311626 ITGA6P23229 1130 aa29.58■■■□□ 2.33
HOXB3-201ENST00000311626 FILIP1Q7Z7B0 1213 aa29.58■■■□□ 2.33
HOXB3-201ENST00000311626 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.58■■■□□ 2.33
HOXB3-201ENST00000311626 DCCP43146 1447 aa29.58■■■□□ 2.33
HOXB3-201ENST00000311626 PCCAP05165 728 aaPredicted RBP29.58■■■□□ 2.33
HOXB3-201ENST00000311626 GTF2F1P35269 517 aaKnown RBP eCLIP29.58■■■□□ 2.332e-6■■■□□ 14.6
HOXB3-201ENST00000311626 RALYLQ86SE5 291 aaKnown RBP29.58■■■□□ 2.33
HOXB3-201ENST00000311626 CARD10Q9BWT7 1032 aa29.58■■■□□ 2.33
HOXB3-201ENST00000311626 BIN1O00499 593 aa29.58■■■□□ 2.33
HOXB3-201ENST00000311626 CPLX1O14810 134 aa29.58■■■□□ 2.33
HOXB3-201ENST00000311626 APPP05067 770 aa29.58■■■□□ 2.33
HOXB3-201ENST00000311626 CHAF1AQ13111 956 aaPredicted RBP29.58■■■□□ 2.33
HOXB3-201ENST00000311626 HELBQ8NG08 1087 aaPredicted RBP29.58■■■□□ 2.33
HOXB3-201ENST00000311626 SENP2Q9HC62 589 aa29.58■■■□□ 2.33
HOXB3-201ENST00000311626 FMR1NBQ8N0W7 255 aaPredicted RBP29.57■■■□□ 2.32
HOXB3-201ENST00000311626 ZBTB38Q8NAP3 1195 aaPredicted RBP29.57■■■□□ 2.32
HOXB3-201ENST00000311626 MRPS27Q92552 414 aaKnown RBP29.57■■■□□ 2.32
HOXB3-201ENST00000311626 NBPF3Q9H094 633 aa29.57■■■□□ 2.32
HOXB3-201ENST00000311626 MYH15Q9Y2K3 1946 aa29.57■■■□□ 2.32
HOXB3-201ENST00000311626 IDH1O75874 414 aaKnown RBP29.57■■■□□ 2.32
HOXB3-201ENST00000311626 SLC9C2Q5TAH2 1124 aa29.57■■■□□ 2.32
HOXB3-201ENST00000311626 NCOA7Q8NI08 942 aa29.57■■■□□ 2.32
HOXB3-201ENST00000311626 CNNM1Q9NRU3 951 aa29.57■■■□□ 2.32
HOXB3-201ENST00000311626 UBR2Q8IWV8 1755 aa29.57■■■□□ 2.32
HOXB3-201ENST00000311626 CTAGE5O15320 804 aa29.56■■■□□ 2.32
HOXB3-201ENST00000311626 LINC00301Q8NCQ3 95 aa29.56■■■□□ 2.32
HOXB3-201ENST00000311626 CSF1RP07333 972 aa29.56■■■□□ 2.32
HOXB3-201ENST00000311626 ISM2Q6H9L7 571 aa29.56■■■□□ 2.32
HOXB3-201ENST00000311626 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.56■■■□□ 2.32
HOXB3-201ENST00000311626 PIH1D3Q9NQM4 214 aaKnown RBP29.56■■■□□ 2.32
HOXB3-201ENST00000311626 RTEL1Q9NZ71 1219 aa29.56■■■□□ 2.32
HOXB3-201ENST00000311626 RIPOR2Q9Y4F9 1068 aa29.56■■■□□ 2.32
HOXB3-201ENST00000311626 PARP4Q9UKK3 1724 aaKnown RBP29.55■■■□□ 2.32
HOXB3-201ENST00000311626 SNAP23O00161 211 aa29.55■■■□□ 2.32
HOXB3-201ENST00000311626 ZFYP08048 801 aaPredicted RBP29.55■■■□□ 2.32
HOXB3-201ENST00000311626 TBC1D10CQ8IV04 446 aa29.55■■■□□ 2.32
HOXB3-201ENST00000311626 TTLL11Q8NHH1 800 aa29.55■■■□□ 2.32
HOXB3-201ENST00000311626 USP27XA6NNY8 438 aa29.54■■■□□ 2.32
HOXB3-201ENST00000311626 EVCP57679 992 aa29.54■■■□□ 2.32
HOXB3-201ENST00000311626 CYB5R4Q7L1T6 521 aa29.54■■■□□ 2.32
HOXB3-201ENST00000311626 FBXO18Q8NFZ0 1043 aa29.54■■■□□ 2.32
HOXB3-201ENST00000311626 ANO10Q9NW15 660 aa29.54■■■□□ 2.32
HOXB3-201ENST00000311626 TNNT1P13805 278 aa29.53■■■□□ 2.32
HOXB3-201ENST00000311626 MARCKSP29966 332 aaPredicted RBP29.53■■■□□ 2.32
HOXB3-201ENST00000311626 TPD52L1Q16890 204 aaPredicted RBP29.53■■■□□ 2.32
HOXB3-201ENST00000311626 LRRFIP1Q32MZ4 808 aaKnown RBP29.53■■■□□ 2.32
HOXB3-201ENST00000311626 ZNF592Q92610 1267 aa29.53■■■□□ 2.32
HOXB3-201ENST00000311626 ADALQ6DHV7 355 aa29.53■■■□□ 2.32
HOXB3-201ENST00000311626 RIC1Q4ADV7 1423 aa29.53■■■□□ 2.32
HOXB3-201ENST00000311626 TNS2Q63HR2 1409 aa29.53■■■□□ 2.32
HOXB3-201ENST00000311626 DPCR1Q3MIW9 517 aa29.52■■■□□ 2.32
HOXB3-201ENST00000311626 NLRP10Q86W26 655 aa29.52■■■□□ 2.32
HOXB3-201ENST00000311626 UBE2Q2LH0YL09 131 aa29.52■■■□□ 2.32
HOXB3-201ENST00000311626 PHKA1P46020 1223 aa29.52■■■□□ 2.32
HOXB3-201ENST00000311626 MYSM1Q5VVJ2 828 aa29.52■■■□□ 2.32
HOXB3-201ENST00000311626 LRRC8AQ8IWT6 810 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms