RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 UBE3BQ7Z3V4 1068 aa7.46□□□□□ -1.22
SSX3-201ENST00000298396 PPP1R42Q7Z4L9 355 aa7.46□□□□□ -1.22
SSX3-201ENST00000298396 DZIP1LQ8IYY4 767 aaKnown RBP7.46□□□□□ -1.22
SSX3-201ENST00000298396 ZBTB38Q8NAP3 1195 aaPredicted RBP7.46□□□□□ -1.22
SSX3-201ENST00000298396 SPIRE2Q8WWL2 714 aa7.46□□□□□ -1.22
SSX3-201ENST00000298396 MEIS3Q99687 375 aa7.46□□□□□ -1.22
SSX3-201ENST00000298396 FHDC1Q9C0D6 1143 aaPredicted RBP7.46□□□□□ -1.22
SSX3-201ENST00000298396 TRMT112Q9UI30 125 aaKnown RBP7.46□□□□□ -1.22
SSX3-201ENST00000298396 SH3TC1Q8TE82 1336 aa7.46□□□□□ -1.22
SSX3-201ENST00000298396 GRM8O00222 908 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 IRS4O14654 1257 aaPredicted RBP7.45□□□□□ -1.22
SSX3-201ENST00000298396 ACTN4O43707 911 aaKnown RBP7.45□□□□□ -1.22
SSX3-201ENST00000298396 CHRNA5P30532 468 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 CCT4P50991 539 aaKnown RBP7.45□□□□□ -1.22
SSX3-201ENST00000298396 FOXO4P98177 505 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 CRY2Q49AN0 593 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 TPTE2Q6XPS3 522 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 ANKRD44Q8N8A2 993 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 SUCLG2Q96I99 432 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 BRIP1Q9BX63 1249 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 PLA2G12BQ9BX93 195 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 TBC1D2Q9BYX2 928 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 NYXQ9GZU5 481 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 SUPT16HQ9Y5B9 1047 aaKnown RBP7.45□□□□□ -1.22
SSX3-201ENST00000298396 DUOX1Q9NRD9 1551 aa7.45□□□□□ -1.22
SSX3-201ENST00000298396 SNED1Q8TER0 1413 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 A0A0G2JLW4 131 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 KDM4AO75164 1064 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 CFHP08603 1231 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 DPEP1P16444 411 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 ST5P78524 1137 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 MVPQ14764 893 aaKnown RBP7.44□□□□□ -1.22
SSX3-201ENST00000298396 MYSM1Q5VVJ2 828 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 NYAP1Q6ZVC0 841 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 RDH13Q8NBN7 331 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 IL27Q8NEV9 243 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 SYT17Q9BSW7 474 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 HPS5Q9UPZ3 1129 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 COG6Q9Y2V7 657 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 CD2APQ9Y5K6 639 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 MYH13Q9UKX3 1938 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 ARAP2Q8WZ64 1704 aa7.44□□□□□ -1.22
SSX3-201ENST00000298396 PSME4Q14997 1843 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 SCN9AQ15858 1988 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 ZBTB7BO15156 539 aaPredicted RBP7.43□□□□□ -1.22
SSX3-201ENST00000298396 SPTLC1O15269 473 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 HOXA2O43364 376 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 PDE8AO60658 829 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 CSF1RP07333 972 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 SRGNP10124 158 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 HOXA10P31260 410 aaPredicted RBP7.43□□□□□ -1.22
SSX3-201ENST00000298396 CTSWP56202 376 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 PDE3AQ14432 1141 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 SF3B3Q15393 1217 aaKnown RBP7.43□□□□□ -1.22
SSX3-201ENST00000298396 RABL6Q3YEC7 729 aaPredicted RBP7.43□□□□□ -1.22
SSX3-201ENST00000298396 C2CD5Q86YS7 1000 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 ITPRIPQ8IWB1 547 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 FTSJ3Q8IY81 847 aaKnown RBP7.43□□□□□ -1.22
SSX3-201ENST00000298396 TTLL11Q8NHH1 800 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 CRBNQ96SW2 442 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 PRR14Q9BWN1 585 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 BICC1Q9H694 974 aaKnown RBP7.43□□□□□ -1.22
SSX3-201ENST00000298396 C1orf115Q9H7X2 142 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 LRRFIP2Q9Y608 721 aaKnown RBP7.43□□□□□ -1.22
SSX3-201ENST00000298396 RTL9Q8NET4 1388 aa7.43□□□□□ -1.22
SSX3-201ENST00000298396 TIAM2Q8IVF5 1701 aa7.42□□□□□ -1.22
SSX3-201ENST00000298396 APLP1P51693 650 aa7.42□□□□□ -1.22
SSX3-201ENST00000298396 TGFB2P61812 414 aa7.42□□□□□ -1.22
SSX3-201ENST00000298396 SKIV2LQ15477 1246 aaKnown RBP7.42□□□□□ -1.22
SSX3-201ENST00000298396 KMT5BQ4FZB7 885 aa7.42□□□□□ -1.22
SSX3-201ENST00000298396 OLFM4Q6UX06 510 aa7.42□□□□□ -1.22
SSX3-201ENST00000298396 KCTD12Q96CX2 325 aaKnown RBP7.42□□□□□ -1.22
SSX3-201ENST00000298396 CCDC85AQ96PX6 553 aaPredicted RBP7.42□□□□□ -1.22
SSX3-201ENST00000298396 GREM2Q9H772 168 aa7.42□□□□□ -1.22
SSX3-201ENST00000298396 SEC31BQ9NQW1 1179 aa7.42□□□□□ -1.22
SSX3-201ENST00000298396 ZBTB40Q9NUA8 1239 aa7.42□□□□□ -1.22
SSX3-201ENST00000298396 WBP1LQ9NX94 342 aa7.42□□□□□ -1.22
SSX3-201ENST00000298396 C9orf78Q9NZ63 289 aaPredicted RBP7.42□□□□□ -1.22
SSX3-201ENST00000298396 PPP1R1BQ9UD71 204 aaPredicted RBP7.42□□□□□ -1.22
SSX3-201ENST00000298396 WWC3Q9ULE0 1092 aa7.42□□□□□ -1.22
SSX3-201ENST00000298396 MYO5AQ9Y4I1 1855 aaKnown RBP7.42□□□□□ -1.22
SSX3-201ENST00000298396 UBTFL1P0CB47 393 aaPredicted RBP7.41□□□□□ -1.22
SSX3-201ENST00000298396 YBX3P16989 372 aaKnown RBP eCLIP7.41□□□□□ -1.22
SSX3-201ENST00000298396 GTF2E1P29083 439 aaPredicted RBP7.41□□□□□ -1.22
SSX3-201ENST00000298396 PDE6BP35913 854 aa7.41□□□□□ -1.22
SSX3-201ENST00000298396 RFX5P48382 616 aaPredicted RBP7.41□□□□□ -1.22
SSX3-201ENST00000298396 PPP4CP60510 307 aa7.41□□□□□ -1.22
SSX3-201ENST00000298396 IRX6P78412 446 aaPredicted RBP7.41□□□□□ -1.22
SSX3-201ENST00000298396 STYK1Q6J9G0 422 aa7.41□□□□□ -1.22
SSX3-201ENST00000298396 RSBN1LQ6PCB5 846 aaPredicted RBP7.41□□□□□ -1.22
SSX3-201ENST00000298396 LMBR1LQ6UX01 489 aa7.41□□□□□ -1.22
SSX3-201ENST00000298396 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.41□□□□□ -1.22
SSX3-201ENST00000298396 C7orf43Q8WVR3 580 aa7.41□□□□□ -1.22
SSX3-201ENST00000298396 CELF1Q92879 486 aaKnown RBP7.41□□□□□ -1.22
SSX3-201ENST00000298396 MASTLQ96GX5 879 aa7.41□□□□□ -1.22
SSX3-201ENST00000298396 NLRP3Q96P20 1036 aa7.41□□□□□ -1.22
SSX3-201ENST00000298396 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.41□□□□□ -1.22
SSX3-201ENST00000298396 COL4A5P29400 1685 aa7.41□□□□□ -1.22
SSX3-201ENST00000298396 PNMA6EA0A0J9YXQ4 647 aa7.4□□□□□ -1.22
SSX3-201ENST00000298396 H0YIN7 160 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms