RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 PRC1O43663 620 aa28.16■■■□□ 2.1
SH3GL1-201ENST00000269886 PCCAP05165 728 aaPredicted RBP28.16■■■□□ 2.1
SH3GL1-201ENST00000269886 ZFYP08048 801 aaPredicted RBP28.16■■■□□ 2.1
SH3GL1-201ENST00000269886 FBXL16Q8N461 479 aa28.16■■■□□ 2.1
SH3GL1-201ENST00000269886 GTF2F1P35269 517 aaKnown RBP eCLIP28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 ATL3Q6DD88 541 aa28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 FSIP1Q8NA03 581 aa28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 ERCC4Q92889 916 aaPredicted RBP28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 CTAGE5O15320 804 aa28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 KINO60870 393 aaKnown RBP28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 CSF1RP07333 972 aa28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 FAM160A1Q05DH4 1040 aa28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 TRIM28Q13263 835 aaKnown RBP28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 KIF6Q6ZMV9 814 aa28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 APPBP2Q92624 585 aa28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 CLIP2Q9UDT6 1046 aa28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 FBXO3Q9UK99 471 aa28.15■■■□□ 2.1
SH3GL1-201ENST00000269886 SHANK3Q9BYB0 1731 aa28.14■■■□□ 2.1
SH3GL1-201ENST00000269886 CAVIN2O95810 425 aa28.14■■■□□ 2.1
SH3GL1-201ENST00000269886 ZSCAN25Q6NSZ9 544 aa28.14■■■□□ 2.1
SH3GL1-201ENST00000269886 VSIG10Q8N0Z9 540 aa28.14■■■□□ 2.1
SH3GL1-201ENST00000269886 ZBTB38Q8NAP3 1195 aaPredicted RBP28.14■■■□□ 2.1
SH3GL1-201ENST00000269886 KLF18A0A0U1RQI7 1052 aa28.14■■■□□ 2.09
SH3GL1-201ENST00000269886 GOLGA6L19H0YKK7 550 aa28.14■■■□□ 2.09
SH3GL1-201ENST00000269886 EVA1CP58658 441 aa28.14■■■□□ 2.09
SH3GL1-201ENST00000269886 STX1AQ16623 288 aa28.14■■■□□ 2.09
SH3GL1-201ENST00000269886 MB21D2Q8IYB1 491 aaPredicted RBP28.14■■■□□ 2.09
SH3GL1-201ENST00000269886 PCDHA7Q9UN72 937 aa28.14■■■□□ 2.09
SH3GL1-201ENST00000269886 HPS5Q9UPZ3 1129 aa28.13■■■□□ 2.09
SH3GL1-201ENST00000269886 GPTP24298 496 aa28.13■■■□□ 2.09
SH3GL1-201ENST00000269886 ANTXR2P58335 489 aa28.13■■■□□ 2.09
SH3GL1-201ENST00000269886 CCDC144BQ3MJ40 725 aa28.13■■■□□ 2.09
SH3GL1-201ENST00000269886 CCDC144CPQ8IYA2 1237 aa28.13■■■□□ 2.09
SH3GL1-201ENST00000269886 GJB4Q9NTQ9 266 aa28.13■■■□□ 2.09
SH3GL1-201ENST00000269886 GOLGA8BA8MQT2 603 aa28.12■■■□□ 2.09
SH3GL1-201ENST00000269886 GPAA1O43292 621 aa28.12■■■□□ 2.09
SH3GL1-201ENST00000269886 POLR3DP05423 398 aaPredicted RBP28.12■■■□□ 2.09
SH3GL1-201ENST00000269886 PLA2G12BQ9BX93 195 aa28.12■■■□□ 2.09
SH3GL1-201ENST00000269886 HLFQ16534 295 aa28.12■■■□□ 2.09
SH3GL1-201ENST00000269886 ATP2B3Q16720 1220 aa28.12■■■□□ 2.09
SH3GL1-201ENST00000269886 METTL24Q5JXM2 366 aa28.12■■■□□ 2.09
SH3GL1-201ENST00000269886 MCAMP43121 646 aa28.11■■■□□ 2.09
SH3GL1-201ENST00000269886 ZNF710Q8N1W2 664 aa28.11■■■□□ 2.09
SH3GL1-201ENST00000269886 PIGBQ92521 554 aa28.11■■■□□ 2.09
SH3GL1-201ENST00000269886 SOS2Q07890 1332 aaPredicted RBP28.11■■■□□ 2.09
SH3GL1-201ENST00000269886 CACTINQ8WUQ7 758 aaKnown RBP28.11■■■□□ 2.09
SH3GL1-201ENST00000269886 CHMP4CQ96CF2 233 aa28.11■■■□□ 2.09
SH3GL1-201ENST00000269886 C8orf76Q96K31 380 aa28.11■■■□□ 2.09
SH3GL1-201ENST00000269886 CLIC4Q9Y696 253 aa28.11■■■□□ 2.09
SH3GL1-201ENST00000269886 ZNF213O14771 459 aa28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 LDHAL6AQ6ZMR3 332 aa28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 MTERF4Q7Z6M4 381 aaKnown RBP28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 NCOA7Q8NI08 942 aa28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 FBXW7Q969H0 707 aa28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 GREM2Q9H772 168 aa28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 RTEL1Q9NZ71 1219 aa28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 RIPOR2Q9Y4F9 1068 aa28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 TOGARAM1Q9Y4F4 1720 aa28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 RIC1Q4ADV7 1423 aa28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 A0A1B0GVL5 298 aa28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 ORC3Q9UBD5 711 aaPredicted RBP28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 DENND2AQ9ULE3 1009 aa28.1■■■□□ 2.09
SH3GL1-201ENST00000269886 ITGA6P23229 1130 aa28.09■■■□□ 2.09
SH3GL1-201ENST00000269886 RALYLQ86SE5 291 aaKnown RBP28.09■■■□□ 2.09
SH3GL1-201ENST00000269886 RIOK3O14730 519 aaKnown RBP28.09■■■□□ 2.09
SH3GL1-201ENST00000269886 FMR1NBQ8N0W7 255 aaPredicted RBP28.09■■■□□ 2.09
SH3GL1-201ENST00000269886 CHAF1AQ13111 956 aaPredicted RBP28.08■■■□□ 2.09
SH3GL1-201ENST00000269886 DHX40Q8IX18 779 aaKnown RBP28.08■■■□□ 2.09
SH3GL1-201ENST00000269886 LINC00301Q8NCQ3 95 aa28.08■■■□□ 2.09
SH3GL1-201ENST00000269886 MRPS27Q92552 414 aaKnown RBP28.08■■■□□ 2.09
SH3GL1-201ENST00000269886 ZNF335Q9H4Z2 1342 aaPredicted RBP28.08■■■□□ 2.09
SH3GL1-201ENST00000269886 ADALQ6DHV7 355 aa28.08■■■□□ 2.08
SH3GL1-201ENST00000269886 SARM1Q6SZW1 724 aa28.08■■■□□ 2.08
SH3GL1-201ENST00000269886 GIGYF2Q6Y7W6 1299 aaKnown RBP28.08■■■□□ 2.08
SH3GL1-201ENST00000269886 FBXO18Q8NFZ0 1043 aa28.08■■■□□ 2.08
SH3GL1-201ENST00000269886 TTLL11Q8NHH1 800 aa28.08■■■□□ 2.08
SH3GL1-201ENST00000269886 BECN2A8MW95 431 aa28.07■■■□□ 2.08
SH3GL1-201ENST00000269886 MAP3K15Q6ZN16 1313 aa28.07■■■□□ 2.08
SH3GL1-201ENST00000269886 NKX2-3Q8TAU0 364 aa28.07■■■□□ 2.08
SH3GL1-201ENST00000269886 CPLX1O14810 134 aa28.07■■■□□ 2.08
SH3GL1-201ENST00000269886 DHX16O60231 1041 aaKnown RBP28.07■■■□□ 2.08
SH3GL1-201ENST00000269886 CDC25BP30305 580 aa28.07■■■□□ 2.08
SH3GL1-201ENST00000269886 NDUFA8P51970 172 aa28.07■■■□□ 2.08
SH3GL1-201ENST00000269886 NBPF3Q9H094 633 aa28.07■■■□□ 2.08
SH3GL1-201ENST00000269886 ANO10Q9NW15 660 aa28.07■■■□□ 2.08
SH3GL1-201ENST00000269886 SLAIN2Q9P270 581 aa28.07■■■□□ 2.08
SH3GL1-201ENST00000269886 STK38Q15208 465 aa28.06■■■□□ 2.08
SH3GL1-201ENST00000269886 NLRP10Q86W26 655 aa28.06■■■□□ 2.08
SH3GL1-201ENST00000269886 C16orf45Q96MC5 204 aaPredicted RBP28.06■■■□□ 2.08
SH3GL1-201ENST00000269886 TEX13AQ9BXU3 409 aaPredicted RBP28.06■■■□□ 2.08
SH3GL1-201ENST00000269886 STARD3NLO95772 234 aa28.06■■■□□ 2.08
SH3GL1-201ENST00000269886 ARID5BQ14865 1188 aa28.06■■■□□ 2.08
SH3GL1-201ENST00000269886 SF3A1Q15459 793 aaKnown RBP28.06■■■□□ 2.08
SH3GL1-201ENST00000269886 SLC9C2Q5TAH2 1124 aa28.06■■■□□ 2.08
SH3GL1-201ENST00000269886 SDF4Q9BRK5 362 aa28.06■■■□□ 2.08
SH3GL1-201ENST00000269886 CNNM1Q9NRU3 951 aa28.06■■■□□ 2.08
SH3GL1-201ENST00000269886 KIF28PB7ZC32 967 aa28.05■■■□□ 2.08
SH3GL1-201ENST00000269886 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.05■■■□□ 2.083e-6■□□□□ 11.2
SH3GL1-201ENST00000269886 BCL2L12Q9HB09 334 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms