RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 DHX32Q7L7V1 743 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 NARFQ9UHQ1 456 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 COL15A1P39059 1388 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 NRXN3Q9Y4C0 1643 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 PES1O00541 588 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 PDIA6Q15084 440 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 ADGRB2O60241 1585 aa16.92■□□□□ 0.3
PDLIM2-201ENST00000265810 ALDH1B1P30837 517 aa16.91■□□□□ 0.3
PDLIM2-201ENST00000265810 GPR108Q9NPR9 543 aa16.91■□□□□ 0.3
PDLIM2-201ENST00000265810 PDE6BP35913 854 aa16.91■□□□□ 0.3
PDLIM2-201ENST00000265810 SSRP1Q08945 709 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-201ENST00000265810 ARHGEF1Q92888 912 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-201ENST00000265810 WDR66Q8TBY9 1149 aa16.91■□□□□ 0.3
PDLIM2-201ENST00000265810 PXDNQ92626 1479 aa16.9■□□□□ 0.3
PDLIM2-201ENST00000265810 ZBTB43O43298 467 aa16.9■□□□□ 0.3
PDLIM2-201ENST00000265810 MPNDQ8N594 471 aa16.9■□□□□ 0.3
PDLIM2-201ENST00000265810 IL27Q8NEV9 243 aa16.9■□□□□ 0.3
PDLIM2-201ENST00000265810 KAT14Q9H8E8 782 aa16.9■□□□□ 0.3
PDLIM2-201ENST00000265810 GDPD2Q9HCC8 539 aa16.9■□□□□ 0.3
PDLIM2-201ENST00000265810 APOBRQ0VD83 1088 aa16.9■□□□□ 0.3
PDLIM2-201ENST00000265810 NOL7Q9UMY1 257 aaKnown RBP16.9■□□□□ 0.3
PDLIM2-201ENST00000265810 TSPY3P0CV98 308 aa16.89■□□□□ 0.3
PDLIM2-201ENST00000265810 TSPY8P0CW00 308 aa16.89■□□□□ 0.3
PDLIM2-201ENST00000265810 JDP2Q8WYK2 163 aa16.89■□□□□ 0.3
PDLIM2-201ENST00000265810 CCDC96Q2M329 555 aa16.89■□□□□ 0.29
PDLIM2-201ENST00000265810 CCDC47Q96A33 483 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-201ENST00000265810 COL5A2P05997 1499 aaPredicted RBP16.89■□□□□ 0.29
PDLIM2-201ENST00000265810 PTH1RQ03431 593 aa16.89■□□□□ 0.29
PDLIM2-201ENST00000265810 AATFQ9NY61 560 aaKnown RBP eCLIP16.89■□□□□ 0.29
PDLIM2-201ENST00000265810 TFIP11Q9UBB9 837 aaKnown RBP16.89■□□□□ 0.29
PDLIM2-201ENST00000265810 PLCG2P16885 1265 aa16.89■□□□□ 0.29
PDLIM2-201ENST00000265810 SLC26A6Q9BXS9 759 aa16.89■□□□□ 0.29
PDLIM2-201ENST00000265810 HDAC9Q9UKV0 1011 aa16.89■□□□□ 0.29
PDLIM2-201ENST00000265810 HSPA4P34932 840 aa16.88■□□□□ 0.29
PDLIM2-201ENST00000265810 IFIT1BQ5T764 474 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-201ENST00000265810 TBC1D9BQ66K14 1250 aa16.88■□□□□ 0.29
PDLIM2-201ENST00000265810 EIF5P55010 431 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-201ENST00000265810 ITPK1Q13572 414 aa16.88■□□□□ 0.29
PDLIM2-201ENST00000265810 SEC63Q9UGP8 760 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-201ENST00000265810 TRIM28Q13263 835 aaKnown RBP16.88■□□□□ 0.29
PDLIM2-201ENST00000265810 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
PDLIM2-201ENST00000265810 TXNRD1Q16881 649 aa16.88■□□□□ 0.29
PDLIM2-201ENST00000265810 C2CD5Q86YS7 1000 aa16.88■□□□□ 0.29
PDLIM2-201ENST00000265810 TMTC2Q8N394 836 aa16.88■□□□□ 0.29
PDLIM2-201ENST00000265810 VAT1LQ9HCJ6 419 aa16.87■□□□□ 0.29
PDLIM2-201ENST00000265810 MYO1BO43795 1136 aa16.87■□□□□ 0.29
PDLIM2-201ENST00000265810 PI16Q6UXB8 463 aa16.87■□□□□ 0.29
PDLIM2-201ENST00000265810 ANTXR1Q9H6X2 564 aa16.87■□□□□ 0.29
PDLIM2-201ENST00000265810 ADAMTSL3P82987 1691 aa16.87■□□□□ 0.29
PDLIM2-201ENST00000265810 ZKSCAN3Q9BRR0 538 aa16.87■□□□□ 0.29
PDLIM2-201ENST00000265810 ZNF804BA4D1E1 1349 aa16.87■□□□□ 0.29
PDLIM2-201ENST00000265810 B4E1Z4 1266 aa16.87■□□□□ 0.29
PDLIM2-201ENST00000265810 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
PDLIM2-201ENST00000265810 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
PDLIM2-201ENST00000265810 TEX11Q8IYF3 940 aa16.87■□□□□ 0.29
PDLIM2-201ENST00000265810 PDE6AP16499 860 aa16.86■□□□□ 0.29
PDLIM2-201ENST00000265810 KIF5BP33176 963 aa16.86■□□□□ 0.29
PDLIM2-201ENST00000265810 RBM26Q5T8P6 1007 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-201ENST00000265810 SNAP23O00161 211 aa16.86■□□□□ 0.29
PDLIM2-201ENST00000265810 BAG4O95429 457 aaKnown RBP16.86■□□□□ 0.29
PDLIM2-201ENST00000265810 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
PDLIM2-201ENST00000265810 SCAND2PQ9GZW5 306 aaPredicted RBP16.86■□□□□ 0.29
PDLIM2-201ENST00000265810 PALD1Q9ULE6 856 aa16.86■□□□□ 0.29
PDLIM2-201ENST00000265810 RXRAP19793 462 aa16.86■□□□□ 0.29
PDLIM2-201ENST00000265810 GTF2IP78347 998 aa16.86■□□□□ 0.29
PDLIM2-201ENST00000265810 TXLNAP40222 546 aa16.85■□□□□ 0.29
PDLIM2-201ENST00000265810 PI4K2BQ8TCG2 481 aa16.85■□□□□ 0.29
PDLIM2-201ENST00000265810 TNMDQ9H2S6 317 aa16.85■□□□□ 0.29
PDLIM2-201ENST00000265810 CABP5Q9NP86 173 aa16.85■□□□□ 0.29
PDLIM2-201ENST00000265810 LETM1O95202 739 aaPredicted RBP16.85■□□□□ 0.29
PDLIM2-201ENST00000265810 SAP30BPQ9UHR5 308 aaKnown RBP16.85■□□□□ 0.29
PDLIM2-201ENST00000265810 PRDM1O75626 825 aa16.85■□□□□ 0.29
PDLIM2-201ENST00000265810 FOXO4P98177 505 aa16.85■□□□□ 0.29
PDLIM2-201ENST00000265810 RTN1Q16799 776 aa16.85■□□□□ 0.29
PDLIM2-201ENST00000265810 VEZTQ9HBM0 779 aa16.85■□□□□ 0.29
PDLIM2-201ENST00000265810 MMP10P09238 476 aa16.84■□□□□ 0.29
PDLIM2-201ENST00000265810 ATP2B4P23634 1241 aa16.84■□□□□ 0.29
PDLIM2-201ENST00000265810 LINC00116Q8NCU8 138 aa16.84■□□□□ 0.29
PDLIM2-201ENST00000265810 NLRP5P59047 1200 aa16.84■□□□□ 0.29
PDLIM2-201ENST00000265810 LARGE2Q8N3Y3 721 aa16.84■□□□□ 0.29
PDLIM2-201ENST00000265810 KIF1AQ12756 1690 aa16.84■□□□□ 0.29
PDLIM2-201ENST00000265810 MFSD14BQ5SR56 506 aa16.84■□□□□ 0.29
PDLIM2-201ENST00000265810 CCDC43Q96MW1 224 aaKnown RBP16.84■□□□□ 0.29
PDLIM2-201ENST00000265810 CDHR2Q9BYE9 1310 aa16.84■□□□□ 0.29
PDLIM2-201ENST00000265810 SLC27A3Q5K4L6 730 aa16.84■□□□□ 0.29
PDLIM2-201ENST00000265810 ATP10DQ9P241 1426 aa16.83■□□□□ 0.29
PDLIM2-201ENST00000265810 ZSCAN22P10073 491 aaPredicted RBP16.83■□□□□ 0.29
PDLIM2-201ENST00000265810 DSCC1Q9BVC3 393 aa16.83■□□□□ 0.29
PDLIM2-201ENST00000265810 DTNBO60941 627 aa16.83■□□□□ 0.28
PDLIM2-201ENST00000265810 NASPP49321 788 aaPredicted RBP16.83■□□□□ 0.28
PDLIM2-201ENST00000265810 MRE11P49959 708 aa16.83■□□□□ 0.28
PDLIM2-201ENST00000265810 TTLL5Q6EMB2 1281 aa16.83■□□□□ 0.28
PDLIM2-201ENST00000265810 CDK5RAP3Q96JB5 506 aa16.83■□□□□ 0.28
PDLIM2-201ENST00000265810 TSPY26PQ9H489 355 aa16.83■□□□□ 0.28
PDLIM2-201ENST00000265810 FMN2Q9NZ56 1722 aa16.83■□□□□ 0.28
PDLIM2-201ENST00000265810 HSPD1P10809 573 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-201ENST00000265810 HOMER1Q86YM7 354 aa16.82■□□□□ 0.28
PDLIM2-201ENST00000265810 FAM13BQ9NYF5 915 aa16.82■□□□□ 0.28
PDLIM2-201ENST00000265810 ADRA2BP18089 450 aa16.82■□□□□ 0.28
PDLIM2-201ENST00000265810 CTDSPL2Q05D32 466 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms