RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SKOR2Q2VWA4 1001 aaPredicted RBP11□□□□□ -0.65
SSR3-201ENST00000265044 NUP133Q8WUM0 1156 aa11□□□□□ -0.65
SSR3-201ENST00000265044 KCPQ6ZWJ8 1503 aa11□□□□□ -0.65
SSR3-201ENST00000265044 MAST3O60307 1309 aa11□□□□□ -0.65
SSR3-201ENST00000265044 RBM5P52756 815 aaKnown RBP eCLIP11□□□□□ -0.65
SSR3-201ENST00000265044 ZNF804AQ7Z570 1209 aa11□□□□□ -0.65
SSR3-201ENST00000265044 UBAC1Q9BSL1 405 aa11□□□□□ -0.65
SSR3-201ENST00000265044 PUS7LQ9H0K6 701 aaKnown RBP11□□□□□ -0.65
SSR3-201ENST00000265044 MAGEB6P1A0A0J9YX57 407 aa10.99□□□□□ -0.65
SSR3-201ENST00000265044 F8W031 263 aaPredicted RBP10.99□□□□□ -0.65
SSR3-201ENST00000265044 DHX16O60231 1041 aaKnown RBP10.99□□□□□ -0.65
SSR3-201ENST00000265044 RANBP6O60518 1105 aaKnown RBP10.99□□□□□ -0.65
SSR3-201ENST00000265044 CYP2E1P05181 493 aaPredicted RBP10.99□□□□□ -0.65
SSR3-201ENST00000265044 ZNF804BA4D1E1 1349 aa10.99□□□□□ -0.65
SSR3-201ENST00000265044 CCDC69A6NI79 296 aa10.99□□□□□ -0.65
SSR3-201ENST00000265044 SLC3A2P08195 630 aaKnown RBP10.99□□□□□ -0.65
SSR3-201ENST00000265044 MCM5P33992 734 aa10.99□□□□□ -0.65
SSR3-201ENST00000265044 DHX32Q7L7V1 743 aaKnown RBP10.99□□□□□ -0.65
SSR3-201ENST00000265044 LRRC4BQ9NT99 713 aa10.99□□□□□ -0.65
SSR3-201ENST00000265044 GGA1Q9UJY5 639 aa10.99□□□□□ -0.65
SSR3-201ENST00000265044 RAD21O60216 631 aa10.99□□□□□ -0.65
SSR3-201ENST00000265044 CYP21A2P08686 494 aa10.99□□□□□ -0.65
SSR3-201ENST00000265044 RPS6KB1P23443 525 aa10.99□□□□□ -0.65
SSR3-201ENST00000265044 SPTY2D1Q68D10 685 aaPredicted RBP10.99□□□□□ -0.65
SSR3-201ENST00000265044 MFSD6Q6ZSS7 791 aa10.99□□□□□ -0.65
SSR3-201ENST00000265044 PIH1D3Q9NQM4 214 aaKnown RBP10.99□□□□□ -0.65
SSR3-201ENST00000265044 M0R2C6 588 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 IFIT3O14879 490 aaKnown RBP10.98□□□□□ -0.65
SSR3-201ENST00000265044 FGAP02671 866 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 MMP10P09238 476 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 PLCB2Q00722 1185 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 NECTIN1Q15223 517 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 CSPP1Q1MSJ5 1256 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 CCDC82Q8N4S0 544 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 FLAD1Q8NFF5 587 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 DSCC1Q9BVC3 393 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 COL16A1Q07092 1604 aaPredicted RBP10.98□□□□□ -0.65
SSR3-201ENST00000265044 BAG6P46379 1132 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 EN1Q05925 392 aaPredicted RBP10.98□□□□□ -0.65
SSR3-201ENST00000265044 APOBRQ0VD83 1088 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 TRIM29Q14134 588 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 SF3B3Q15393 1217 aaKnown RBP10.98□□□□□ -0.65
SSR3-201ENST00000265044 SF3A1Q15459 793 aaKnown RBP10.98□□□□□ -0.65
SSR3-201ENST00000265044 CCDC144CPQ8IYA2 1237 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 CARMIL3Q8ND23 1372 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 CEBPZQ03701 1054 aaKnown RBP10.98□□□□□ -0.65
SSR3-201ENST00000265044 C3orf67Q6ZVT6 689 aa10.98□□□□□ -0.65
SSR3-201ENST00000265044 GPR101Q96P66 508 aaPredicted RBP10.98□□□□□ -0.65
SSR3-201ENST00000265044 GOLGA6L3A6NEY3 463 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 GOLGA8BA8MQT2 603 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 PRC1O43663 620 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 LDHBP07195 334 aaKnown RBP10.97□□□□□ -0.65
SSR3-201ENST00000265044 GDPD2Q9HCC8 539 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 STX6O43752 255 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 GUCY1B3Q02153 619 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 MICU3Q86XE3 530 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 SYAP1Q96A49 352 aaPredicted RBP10.97□□□□□ -0.65
SSR3-201ENST00000265044 TM6SF1Q9BZW5 370 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 ZSWIM6Q9HCJ5 1215 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 PKD1L3Q7Z443 1732 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 KLF18A0A0U1RQI7 1052 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 E7EWF7 191 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 BAG4O95429 457 aaKnown RBP10.97□□□□□ -0.65
SSR3-201ENST00000265044 POLR3DP05423 398 aaPredicted RBP10.97□□□□□ -0.65
SSR3-201ENST00000265044 ADD2P35612 726 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 ZRSR1Q15695 479 aaKnown RBP10.97□□□□□ -0.65
SSR3-201ENST00000265044 TMEM67Q5HYA8 995 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 PRR5LQ6MZQ0 368 aa10.97□□□□□ -0.65
SSR3-201ENST00000265044 CAVIN1Q6NZI2 390 aaKnown RBP10.97□□□□□ -0.65
SSR3-201ENST00000265044 CRNKL1Q9BZJ0 848 aaKnown RBP10.97□□□□□ -0.65
SSR3-201ENST00000265044 AATFQ9NY61 560 aaKnown RBP eCLIP10.97□□□□□ -0.65
SSR3-201ENST00000265044 BAG3O95817 575 aa10.96□□□□□ -0.65
SSR3-201ENST00000265044 LDHCP07864 332 aa10.96□□□□□ -0.65
SSR3-201ENST00000265044 GRAPQ13588 217 aa10.96□□□□□ -0.65
SSR3-201ENST00000265044 RAB3GAP1Q15042 981 aa10.96□□□□□ -0.65
SSR3-201ENST00000265044 GRAPLQ8TC17 118 aaPredicted RBP10.96□□□□□ -0.65
SSR3-201ENST00000265044 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.96□□□□□ -0.65
SSR3-201ENST00000265044 RNF41Q9H4P4 317 aaPredicted RBP10.96□□□□□ -0.65
SSR3-201ENST00000265044 PKP1Q13835 747 aa10.96□□□□□ -0.65
SSR3-201ENST00000265044 UBE3CQ15386 1083 aa10.96□□□□□ -0.65
SSR3-201ENST00000265044 INTS4Q96HW7 963 aaKnown RBP10.96□□□□□ -0.65
SSR3-201ENST00000265044 TRIM34Q9BYJ4 488 aa10.96□□□□□ -0.65
SSR3-201ENST00000265044 B4E1Z4 1266 aa10.96□□□□□ -0.66
SSR3-201ENST00000265044 H0YIN7 160 aa10.96□□□□□ -0.66
SSR3-201ENST00000265044 GNAT2P19087 354 aa10.96□□□□□ -0.66
SSR3-201ENST00000265044 SDR42E1Q8WUS8 393 aa10.96□□□□□ -0.66
SSR3-201ENST00000265044 MKNK2Q9HBH9 465 aa10.96□□□□□ -0.66
SSR3-201ENST00000265044 GYS1P13807 737 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 ME3Q16798 604 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 DPP8Q6V1X1 898 aaPredicted RBP10.95□□□□□ -0.66
SSR3-201ENST00000265044 BCL2L12Q9HB09 334 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 ZKSCAN3Q9BRR0 538 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 SLC12A7Q9Y666 1083 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 ZNF609O15014 1411 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 XDHP47989 1333 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 C5P01031 1676 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 RXRAP19793 462 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 PDE6BP35913 854 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 CTDSPL2Q05D32 466 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 IQCA1Q86XH1 822 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms