RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 PTGS1P23219 599 aa19.22■□□□□ 0.67
HOXD3-201ENST00000249440 ADORA1P30542 326 aa19.22■□□□□ 0.67
HOXD3-201ENST00000249440 GTF2F1P35269 517 aaKnown RBP eCLIP19.22■□□□□ 0.67
HOXD3-201ENST00000249440 IFIT5Q13325 482 aaKnown RBP19.22■□□□□ 0.67
HOXD3-201ENST00000249440 CSF1RP07333 972 aa19.22■□□□□ 0.67
HOXD3-201ENST00000249440 CCDC186Q7Z3E2 898 aa19.22■□□□□ 0.67
HOXD3-201ENST00000249440 ZBTB38Q8NAP3 1195 aaPredicted RBP19.22■□□□□ 0.67
HOXD3-201ENST00000249440 APPBP2Q92624 585 aa19.22■□□□□ 0.67
HOXD3-201ENST00000249440 FAM89AQ96GI7 184 aa19.22■□□□□ 0.67
HOXD3-201ENST00000249440 FTOQ9C0B1 505 aaKnown RBP eCLIP19.22■□□□□ 0.67
HOXD3-201ENST00000249440 NWD2Q9ULI1 1742 aa19.21■□□□□ 0.67
HOXD3-201ENST00000249440 MYH7P12883 1935 aa19.21■□□□□ 0.67
HOXD3-201ENST00000249440 GOLGA6L19H0YKK7 550 aa19.21■□□□□ 0.67
HOXD3-201ENST00000249440 KINO60870 393 aaKnown RBP19.21■□□□□ 0.67
HOXD3-201ENST00000249440 FGAP02671 866 aa19.21■□□□□ 0.67
HOXD3-201ENST00000249440 ME1P48163 572 aa19.2■□□□□ 0.66
HOXD3-201ENST00000249440 FAM160A1Q05DH4 1040 aa19.2■□□□□ 0.66
HOXD3-201ENST00000249440 CHAF1AQ13111 956 aaPredicted RBP19.2■□□□□ 0.66
HOXD3-201ENST00000249440 SNW1Q13573 536 aaKnown RBP19.2■□□□□ 0.66
HOXD3-201ENST00000249440 STX1AQ16623 288 aa19.2■□□□□ 0.66
HOXD3-201ENST00000249440 VSIG10Q8N0Z9 540 aa19.2■□□□□ 0.66
HOXD3-201ENST00000249440 FDPSP14324 419 aaKnown RBP19.2■□□□□ 0.66
HOXD3-201ENST00000249440 EVA1CP58658 441 aa19.2■□□□□ 0.66
HOXD3-201ENST00000249440 GUCY1B3Q02153 619 aa19.2■□□□□ 0.66
HOXD3-201ENST00000249440 CCDC85AQ96PX6 553 aaPredicted RBP19.2■□□□□ 0.66
HOXD3-201ENST00000249440 FOXP2O15409 715 aa19.19■□□□□ 0.66
HOXD3-201ENST00000249440 ZAP70P43403 619 aa19.19■□□□□ 0.66
HOXD3-201ENST00000249440 HAND2P61296 217 aa19.19■□□□□ 0.66
HOXD3-201ENST00000249440 NCOA7Q8NI08 942 aa19.19■□□□□ 0.66
HOXD3-201ENST00000249440 GOLPH3LQ9H4A5 285 aa19.19■□□□□ 0.66
HOXD3-201ENST00000249440 PPFIA3O75145 1194 aa19.19■□□□□ 0.66
HOXD3-201ENST00000249440 SCARF1Q14162 830 aa19.19■□□□□ 0.66
HOXD3-201ENST00000249440 IQCB1Q15051 598 aa19.19■□□□□ 0.66
HOXD3-201ENST00000249440 ILDR1Q86SU0 546 aaPredicted RBP19.19■□□□□ 0.66
HOXD3-201ENST00000249440 ENGASEQ8NFI3 743 aa19.19■□□□□ 0.66
HOXD3-201ENST00000249440 PRC1O43663 620 aa19.18■□□□□ 0.66
HOXD3-201ENST00000249440 STARD3NLO95772 234 aa19.18■□□□□ 0.66
HOXD3-201ENST00000249440 CDC25BP30305 580 aa19.18■□□□□ 0.66
HOXD3-201ENST00000249440 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.18■□□□□ 0.66
HOXD3-201ENST00000249440 PUS7LQ9H0K6 701 aaKnown RBP19.18■□□□□ 0.66
HOXD3-201ENST00000249440 CLIP2Q9UDT6 1046 aa19.18■□□□□ 0.66
HOXD3-201ENST00000249440 LRP6O75581 1613 aa19.18■□□□□ 0.66
HOXD3-201ENST00000249440 ZNF213O14771 459 aa19.18■□□□□ 0.66
HOXD3-201ENST00000249440 SARM1Q6SZW1 724 aa19.18■□□□□ 0.66
HOXD3-201ENST00000249440 RALYLQ86SE5 291 aaKnown RBP19.18■□□□□ 0.66
HOXD3-201ENST00000249440 MB21D2Q8IYB1 491 aaPredicted RBP19.18■□□□□ 0.66
HOXD3-201ENST00000249440 RTEL1Q9NZ71 1219 aa19.18■□□□□ 0.66
HOXD3-201ENST00000249440 TOGARAM1Q9Y4F4 1720 aa19.18■□□□□ 0.66
HOXD3-201ENST00000249440 ATP2B3Q16720 1220 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 ADALQ6DHV7 355 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 DNAJC10Q8IXB1 793 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 FSIP1Q8NA03 581 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 C8orf76Q96K31 380 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 ANO10Q9NW15 660 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 NRBP1Q9UHY1 535 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 KLF18A0A0U1RQI7 1052 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 GPAA1O43292 621 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 METTL24Q5JXM2 366 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 ZSCAN25Q6NSZ9 544 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 GIGYF2Q6Y7W6 1299 aaKnown RBP19.17■□□□□ 0.66
HOXD3-201ENST00000249440 GPHNQ9NQX3 736 aaPredicted RBP19.17■□□□□ 0.66
HOXD3-201ENST00000249440 WDR19Q8NEZ3 1342 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 CDHR2Q9BYE9 1310 aa19.17■□□□□ 0.66
HOXD3-201ENST00000249440 BECN2A8MW95 431 aa19.16■□□□□ 0.66
HOXD3-201ENST00000249440 LDHAL6AQ6ZMR3 332 aa19.16■□□□□ 0.66
HOXD3-201ENST00000249440 C11orf57Q6ZUT1 292 aaPredicted RBP19.16■□□□□ 0.66
HOXD3-201ENST00000249440 MRPS27Q92552 414 aaKnown RBP19.16■□□□□ 0.66
HOXD3-201ENST00000249440 PCDHA7Q9UN72 937 aa19.16■□□□□ 0.66
HOXD3-201ENST00000249440 RIPOR2Q9Y4F9 1068 aa19.16■□□□□ 0.66
HOXD3-201ENST00000249440 MAP3K15Q6ZN16 1313 aa19.16■□□□□ 0.66
HOXD3-201ENST00000249440 PLCH1Q4KWH8 1693 aa19.16■□□□□ 0.66
HOXD3-201ENST00000249440 GOLGA8BA8MQT2 603 aa19.16■□□□□ 0.66
HOXD3-201ENST00000249440 CPLX1O14810 134 aa19.16■□□□□ 0.66
HOXD3-201ENST00000249440 FBXO18Q8NFZ0 1043 aa19.16■□□□□ 0.66
HOXD3-201ENST00000249440 ASAP1Q9ULH1 1129 aa19.16■□□□□ 0.66
HOXD3-201ENST00000249440 A0A1W2PQ27 194 aa19.15■□□□□ 0.66
HOXD3-201ENST00000249440 A0A1W2PQ64 194 aa19.15■□□□□ 0.66
HOXD3-201ENST00000249440 A0A1W2PQD8 194 aa19.15■□□□□ 0.66
HOXD3-201ENST00000249440 HSP90AB3PQ58FF7 597 aa19.15■□□□□ 0.66
HOXD3-201ENST00000249440 MRFAP1L1Q96HT8 127 aa19.15■□□□□ 0.66
HOXD3-201ENST00000249440 ORC3Q9UBD5 711 aaPredicted RBP19.15■□□□□ 0.66
HOXD3-201ENST00000249440 AKAP11Q9UKA4 1901 aa19.15■□□□□ 0.66
HOXD3-201ENST00000249440 ITGA6P23229 1130 aa19.14■□□□□ 0.66
HOXD3-201ENST00000249440 LRMPQ12912 555 aa19.14■□□□□ 0.66
HOXD3-201ENST00000249440 TRDNQ13061 729 aa19.14■□□□□ 0.66
HOXD3-201ENST00000249440 TTF1Q15361 905 aaPredicted RBP19.14■□□□□ 0.66
HOXD3-201ENST00000249440 SF3A1Q15459 793 aaKnown RBP19.14■□□□□ 0.66
HOXD3-201ENST00000249440 PI16Q6UXB8 463 aa19.14■□□□□ 0.66
HOXD3-201ENST00000249440 BRAPQ7Z569 592 aa19.14■□□□□ 0.66
HOXD3-201ENST00000249440 LINC00301Q8NCQ3 95 aa19.14■□□□□ 0.66
HOXD3-201ENST00000249440 KCNG4Q8TDN1 519 aa19.14■□□□□ 0.66
HOXD3-201ENST00000249440 PIGBQ92521 554 aa19.14■□□□□ 0.66
HOXD3-201ENST00000249440 ZNF512BQ96KM6 892 aaPredicted RBP19.14■□□□□ 0.66
HOXD3-201ENST00000249440 HPS5Q9UPZ3 1129 aa19.14■□□□□ 0.66
HOXD3-201ENST00000249440 DDX60Q8IY21 1712 aaKnown RBP19.14■□□□□ 0.66
HOXD3-201ENST00000249440 RIC1Q4ADV7 1423 aa19.14■□□□□ 0.65
HOXD3-201ENST00000249440 MCAMP43121 646 aa19.14■□□□□ 0.65
HOXD3-201ENST00000249440 STK38Q15208 465 aa19.14■□□□□ 0.65
HOXD3-201ENST00000249440 FMR1NBQ8N0W7 255 aaPredicted RBP19.14■□□□□ 0.65
HOXD3-201ENST00000249440 TTLL11Q8NHH1 800 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms