RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 FGAP02671 866 aa25.34■■□□□ 1.65
SH2D3A-201ENST00000245908 GIGYF2Q6Y7W6 1299 aaKnown RBP25.34■■□□□ 1.65
SH2D3A-201ENST00000245908 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.34■■□□□ 1.65
SH2D3A-201ENST00000245908 MB21D2Q8IYB1 491 aaPredicted RBP25.34■■□□□ 1.65
SH2D3A-201ENST00000245908 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.34■■□□□ 1.65
SH2D3A-201ENST00000245908 GOLPH3LQ9H4A5 285 aa25.34■■□□□ 1.65
SH2D3A-201ENST00000245908 ITGB4P16144 1822 aa25.34■■□□□ 1.65
SH2D3A-201ENST00000245908 ZNF75DP51815 510 aa25.34■■□□□ 1.65
SH2D3A-201ENST00000245908 PIGBQ92521 554 aa25.34■■□□□ 1.65
SH2D3A-201ENST00000245908 AKAP11Q9UKA4 1901 aa25.33■■□□□ 1.65
SH2D3A-201ENST00000245908 ANKRD36CQ5JPF3 1778 aa25.33■■□□□ 1.65
SH2D3A-201ENST00000245908 STARD3NLO95772 234 aa25.33■■□□□ 1.65
SH2D3A-201ENST00000245908 PODXL2Q9NZ53 605 aa25.33■■□□□ 1.65
SH2D3A-201ENST00000245908 HAND2P61296 217 aa25.33■■□□□ 1.64
SH2D3A-201ENST00000245908 SNW1Q13573 536 aaKnown RBP25.33■■□□□ 1.64
SH2D3A-201ENST00000245908 ATP2B3Q16720 1220 aa25.33■■□□□ 1.64
SH2D3A-201ENST00000245908 CCDC73Q6ZRK6 1079 aa25.33■■□□□ 1.64
SH2D3A-201ENST00000245908 PUS7LQ9H0K6 701 aaKnown RBP25.33■■□□□ 1.64
SH2D3A-201ENST00000245908 GPHNQ9NQX3 736 aaPredicted RBP25.33■■□□□ 1.64
SH2D3A-201ENST00000245908 RIPOR2Q9Y4F9 1068 aa25.33■■□□□ 1.64
SH2D3A-201ENST00000245908 GUCY1B3Q02153 619 aa25.32■■□□□ 1.64
SH2D3A-201ENST00000245908 ENGASEQ8NFI3 743 aa25.32■■□□□ 1.64
SH2D3A-201ENST00000245908 MYH3P11055 1940 aa25.32■■□□□ 1.64
SH2D3A-201ENST00000245908 PRC1O43663 620 aa25.32■■□□□ 1.64
SH2D3A-201ENST00000245908 PTGS1P23219 599 aa25.32■■□□□ 1.64
SH2D3A-201ENST00000245908 TRIM5Q9C035 493 aa25.31■■□□□ 1.64
SH2D3A-201ENST00000245908 WDR19Q8NEZ3 1342 aa25.31■■□□□ 1.64
SH2D3A-201ENST00000245908 LRP6O75581 1613 aa25.31■■□□□ 1.64
SH2D3A-201ENST00000245908 FAM160A1Q05DH4 1040 aa25.3■■□□□ 1.64
SH2D3A-201ENST00000245908 METTL24Q5JXM2 366 aa25.3■■□□□ 1.64
SH2D3A-201ENST00000245908 NLRP10Q86W26 655 aa25.3■■□□□ 1.64
SH2D3A-201ENST00000245908 GPAA1O43292 621 aa25.3■■□□□ 1.64
SH2D3A-201ENST00000245908 IQCB1Q15051 598 aa25.3■■□□□ 1.64
SH2D3A-201ENST00000245908 STX1AQ16623 288 aa25.3■■□□□ 1.64
SH2D3A-201ENST00000245908 PI16Q6UXB8 463 aa25.3■■□□□ 1.64
SH2D3A-201ENST00000245908 TTLL11Q8NHH1 800 aa25.3■■□□□ 1.64
SH2D3A-201ENST00000245908 NCOA7Q8NI08 942 aa25.3■■□□□ 1.64
SH2D3A-201ENST00000245908 ZNF512BQ96KM6 892 aaPredicted RBP25.3■■□□□ 1.64
SH2D3A-201ENST00000245908 ATRNO75882 1429 aa25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 PPFIA3O75145 1194 aa25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 ANTXR2P58335 489 aa25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 RTEL1Q9NZ71 1219 aa25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 HPS5Q9UPZ3 1129 aa25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 DHX16O60231 1041 aaKnown RBP25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 ITGA6P23229 1130 aa25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 GTF2F1P35269 517 aaKnown RBP eCLIP25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 MCAMP43121 646 aa25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 HLFQ16534 295 aa25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 HSP90AB3PQ58FF7 597 aa25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 SYNE4Q8N205 404 aa25.29■■□□□ 1.64
SH2D3A-201ENST00000245908 NHSL1Q5SYE7 1610 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 KLF18A0A0U1RQI7 1052 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 KINO60870 393 aaKnown RBP25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 CDC25BP30305 580 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 LDHAL6AQ6ZMR3 332 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 CCDC186Q7Z3E2 898 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 GREM2Q9H772 168 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 C4AP0C0L4 1744 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 C4BP0C0L5 1744 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 ZNF213O14771 459 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 ME1P48163 572 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 CTSWP56202 376 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 ZSCAN25Q6NSZ9 544 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 C11orf57Q6ZUT1 292 aaPredicted RBP25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 FSIP1Q8NA03 581 aa25.28■■□□□ 1.64
SH2D3A-201ENST00000245908 GOLGA8BA8MQT2 603 aa25.27■■□□□ 1.64
SH2D3A-201ENST00000245908 SARM1Q6SZW1 724 aa25.27■■□□□ 1.64
SH2D3A-201ENST00000245908 RALYLQ86SE5 291 aaKnown RBP25.27■■□□□ 1.64
SH2D3A-201ENST00000245908 ANKRD18BA2A2Z9 1011 aa25.26■■□□□ 1.63
SH2D3A-201ENST00000245908 GPTP24298 496 aa25.26■■□□□ 1.63
SH2D3A-201ENST00000245908 ADD2P35612 726 aa25.26■■□□□ 1.63
SH2D3A-201ENST00000245908 UTP14CQ5TAP6 766 aaKnown RBP25.26■■□□□ 1.63
SH2D3A-201ENST00000245908 DRC7Q8IY82 874 aa25.26■■□□□ 1.63
SH2D3A-201ENST00000245908 VGLL2Q8N8G2 317 aa25.26■■□□□ 1.63
SH2D3A-201ENST00000245908 C8orf76Q96K31 380 aa25.26■■□□□ 1.63
SH2D3A-201ENST00000245908 STRCQ7RTU9 1775 aa25.26■■□□□ 1.63
SH2D3A-201ENST00000245908 CCDC94Q9BW85 323 aaPredicted RBP25.26■■□□□ 1.63
SH2D3A-201ENST00000245908 PCDHA7Q9UN72 937 aa25.26■■□□□ 1.63
SH2D3A-201ENST00000245908 FBXO18Q8NFZ0 1043 aa25.25■■□□□ 1.63
SH2D3A-201ENST00000245908 MRPS27Q92552 414 aaKnown RBP25.25■■□□□ 1.63
SH2D3A-201ENST00000245908 A0A1W2PQ27 194 aa25.25■■□□□ 1.63
SH2D3A-201ENST00000245908 A0A1W2PQ64 194 aa25.25■■□□□ 1.63
SH2D3A-201ENST00000245908 A0A1W2PQD8 194 aa25.25■■□□□ 1.63
SH2D3A-201ENST00000245908 GOLGA6L19H0YKK7 550 aa25.25■■□□□ 1.63
SH2D3A-201ENST00000245908 TTF1Q15361 905 aaPredicted RBP25.25■■□□□ 1.63
SH2D3A-201ENST00000245908 ADALQ6DHV7 355 aa25.25■■□□□ 1.63
SH2D3A-201ENST00000245908 ORC3Q9UBD5 711 aaPredicted RBP25.25■■□□□ 1.63
SH2D3A-201ENST00000245908 NUP98P52948 1817 aa25.24■■□□□ 1.63
SH2D3A-201ENST00000245908 FMR1NBQ8N0W7 255 aaPredicted RBP25.24■■□□□ 1.63
SH2D3A-201ENST00000245908 LINC00301Q8NCQ3 95 aa25.24■■□□□ 1.63
SH2D3A-201ENST00000245908 CNNM1Q9NRU3 951 aa25.24■■□□□ 1.63
SH2D3A-201ENST00000245908 NRBP1Q9UHY1 535 aa25.24■■□□□ 1.63
SH2D3A-201ENST00000245908 BCL9O00512 1426 aa25.24■■□□□ 1.63
SH2D3A-201ENST00000245908 CYP19A1P11511 503 aaPredicted RBP25.24■■□□□ 1.63
SH2D3A-201ENST00000245908 RGS22Q8NE09 1264 aa25.24■■□□□ 1.63
SH2D3A-201ENST00000245908 NBPF3Q9H094 633 aa25.24■■□□□ 1.63
SH2D3A-201ENST00000245908 ANO10Q9NW15 660 aa25.24■■□□□ 1.63
SH2D3A-201ENST00000245908 MYO5AQ9Y4I1 1855 aaKnown RBP25.23■■□□□ 1.63
SH2D3A-201ENST00000245908 IRS4O14654 1257 aaPredicted RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms