RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 CAVIN4Q5BKX8 364 aa20.4■□□□□ 0.86
CDKN1A-201ENST00000244741 SYT17Q9BSW7 474 aa20.4■□□□□ 0.86
CDKN1A-201ENST00000244741 GOLGA6L3A6NEY3 463 aa20.39■□□□□ 0.85
CDKN1A-201ENST00000244741 HIBADHP31937 336 aaKnown RBP20.39■□□□□ 0.85
CDKN1A-201ENST00000244741 AOX1Q06278 1338 aa20.39■□□□□ 0.85
CDKN1A-201ENST00000244741 IRS2Q9Y4H2 1338 aa20.39■□□□□ 0.85
CDKN1A-201ENST00000244741 GOLIM4O00461 696 aa20.38■□□□□ 0.85
CDKN1A-201ENST00000244741 ZAP70P43403 619 aa20.38■□□□□ 0.85
CDKN1A-201ENST00000244741 RASGRF1Q13972 1273 aa20.38■□□□□ 0.85
CDKN1A-201ENST00000244741 DUOX1Q9NRD9 1551 aa20.38■□□□□ 0.85
CDKN1A-201ENST00000244741 DOK7Q18PE1 504 aa20.38■□□□□ 0.85
CDKN1A-201ENST00000244741 WASHC4Q2M389 1173 aa20.37■□□□□ 0.85
CDKN1A-201ENST00000244741 FBXO33Q7Z6M2 555 aa20.37■□□□□ 0.85
CDKN1A-201ENST00000244741 HAUS7Q99871 368 aa20.37■□□□□ 0.85
CDKN1A-201ENST00000244741 ESYT1Q9BSJ8 1104 aa20.37■□□□□ 0.85
CDKN1A-201ENST00000244741 LTBP1Q14766 1721 aa20.37■□□□□ 0.85
CDKN1A-201ENST00000244741 ARAP2Q8WZ64 1704 aa20.37■□□□□ 0.85
CDKN1A-201ENST00000244741 CHGBP05060 677 aa20.36■□□□□ 0.85
CDKN1A-201ENST00000244741 XRCC6P12956 609 aaKnown RBP eCLIP20.36■□□□□ 0.85
CDKN1A-201ENST00000244741 CCDC93Q567U6 631 aa20.36■□□□□ 0.85
CDKN1A-201ENST00000244741 HMG20BQ9P0W2 317 aa20.36■□□□□ 0.85
CDKN1A-201ENST00000244741 BRCA1P38398 1863 aaKnown RBP20.36■□□□□ 0.85
CDKN1A-201ENST00000244741 ARID4AP29374 1257 aaPredicted RBP20.36■□□□□ 0.85
CDKN1A-201ENST00000244741 ZC3H12CQ9C0D7 883 aaKnown RBP20.36■□□□□ 0.85
CDKN1A-201ENST00000244741 ST18O60284 1047 aa20.35■□□□□ 0.85
CDKN1A-201ENST00000244741 CHMLP26374 656 aa20.35■□□□□ 0.85
CDKN1A-201ENST00000244741 CHAF1AQ13111 956 aaPredicted RBP20.35■□□□□ 0.85
CDKN1A-201ENST00000244741 AOC3Q16853 763 aa20.35■□□□□ 0.85
CDKN1A-201ENST00000244741 SPATA5Q8NB90 893 aa20.35■□□□□ 0.85
CDKN1A-201ENST00000244741 ZNF277Q9NRM2 450 aaPredicted RBP20.35■□□□□ 0.85
CDKN1A-201ENST00000244741 PAG1Q9NWQ8 432 aa20.35■□□□□ 0.85
CDKN1A-201ENST00000244741 UQCRFS1P1P0C7P4 283 aa20.34■□□□□ 0.85
CDKN1A-201ENST00000244741 SLFNL1Q499Z3 407 aa20.34■□□□□ 0.85
CDKN1A-201ENST00000244741 DBNDD1Q9H9R9 158 aa20.34■□□□□ 0.85
CDKN1A-201ENST00000244741 GNL3LQ9NVN8 582 aaKnown RBP20.34■□□□□ 0.85
CDKN1A-201ENST00000244741 CYP2E1P05181 493 aaPredicted RBP20.34■□□□□ 0.85
CDKN1A-201ENST00000244741 CLEC17AQ6ZS10 378 aa20.34■□□□□ 0.85
CDKN1A-201ENST00000244741 ZNF804AQ7Z570 1209 aa20.34■□□□□ 0.85
CDKN1A-201ENST00000244741 CNTROBQ8N137 903 aa20.34■□□□□ 0.85
CDKN1A-201ENST00000244741 SNED1Q8TER0 1413 aa20.33■□□□□ 0.85
CDKN1A-201ENST00000244741 COL1A1P02452 1464 aaPredicted RBP20.33■□□□□ 0.85
CDKN1A-201ENST00000244741 CC2D2BQ6DHV5 1058 aa20.33■□□□□ 0.85
CDKN1A-201ENST00000244741 RTKN2Q8IZC4 609 aa20.33■□□□□ 0.85
CDKN1A-201ENST00000244741 FSD1Q9BTV5 496 aa20.33■□□□□ 0.85
CDKN1A-201ENST00000244741 CD209Q9NNX6 404 aa20.33■□□□□ 0.85
CDKN1A-201ENST00000244741 AKAP11Q9UKA4 1901 aa20.33■□□□□ 0.85
CDKN1A-201ENST00000244741 MED23Q9ULK4 1368 aa20.33■□□□□ 0.85
CDKN1A-201ENST00000244741 G3V3G9 751 aa20.32■□□□□ 0.84
CDKN1A-201ENST00000244741 DCAF8Q5TAQ9 597 aa20.32■□□□□ 0.84
CDKN1A-201ENST00000244741 EVI5LQ96CN4 794 aa20.32■□□□□ 0.84
CDKN1A-201ENST00000244741 ZNF512BQ96KM6 892 aaPredicted RBP20.32■□□□□ 0.84
CDKN1A-201ENST00000244741 RTFDC1Q9BY42 306 aaPredicted RBP20.32■□□□□ 0.84
CDKN1A-201ENST00000244741 PIH1D3Q9NQM4 214 aaKnown RBP20.32■□□□□ 0.84
CDKN1A-201ENST00000244741 KCNQ5Q9NR82 932 aa20.32■□□□□ 0.84
CDKN1A-201ENST00000244741 PPIP5K2O43314 1243 aa20.31■□□□□ 0.84
CDKN1A-201ENST00000244741 BAG4O95429 457 aaKnown RBP20.31■□□□□ 0.84
CDKN1A-201ENST00000244741 SKOR2Q2VWA4 1001 aaPredicted RBP20.31■□□□□ 0.84
CDKN1A-201ENST00000244741 FBXW7Q969H0 707 aa20.31■□□□□ 0.84
CDKN1A-201ENST00000244741 EYA3Q99504 573 aa20.31■□□□□ 0.84
CDKN1A-201ENST00000244741 RASSF7Q02833 373 aa20.31■□□□□ 0.84
CDKN1A-201ENST00000244741 C15orf52Q6ZUT6 534 aaKnown RBP20.31■□□□□ 0.84
CDKN1A-201ENST00000244741 ZGPATQ8N5A5 531 aaKnown RBP20.31■□□□□ 0.84
CDKN1A-201ENST00000244741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.31■□□□□ 0.84
CDKN1A-201ENST00000244741 ABCF2Q9UG63 623 aa20.31■□□□□ 0.84
CDKN1A-201ENST00000244741 PTMSP20962 102 aa20.3■□□□□ 0.84
CDKN1A-201ENST00000244741 NFKBIEO00221 500 aa20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 IDH1O75874 414 aaKnown RBP20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 NUCB2P80303 420 aa20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 PKP1Q13835 747 aa20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 TDRD7Q8NHU6 1098 aaKnown RBP20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 CWC22Q9HCG8 908 aaKnown RBP20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 ANO2Q9NQ90 1003 aa20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 PALD1Q9ULE6 856 aa20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 AK9Q5TCS8 1911 aa20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 NEK4P51957 841 aa20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 SOGA3Q5TF21 947 aa20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 PANK2Q9BZ23 570 aa20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 DENND2AQ9ULE3 1009 aa20.29■□□□□ 0.84
CDKN1A-201ENST00000244741 CHD4Q14839 1912 aa20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 YBX3P16989 372 aaKnown RBP eCLIP20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 PSMD1Q99460 953 aa20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 TAOK3Q9H2K8 898 aa20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 MYO5AQ9Y4I1 1855 aaKnown RBP20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 GTF2IP78347 998 aa20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 KIAA2012Q0VF49 1180 aa20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 CWC27Q6UX04 472 aaKnown RBP20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 ARHGAP27Q6ZUM4 889 aa20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 LARGE2Q8N3Y3 721 aa20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 KBTBD3Q8NAB2 608 aa20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 MXD3Q9BW11 206 aa20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 COA1Q9GZY4 146 aa20.28■□□□□ 0.84
CDKN1A-201ENST00000244741 ECE2O60344 883 aa20.27■□□□□ 0.84
CDKN1A-201ENST00000244741 IL1R1P14778 569 aa20.27■□□□□ 0.84
CDKN1A-201ENST00000244741 SUPT20HQ8NEM7 779 aa20.27■□□□□ 0.84
CDKN1A-201ENST00000244741 IL25Q9H293 177 aa20.27■□□□□ 0.84
CDKN1A-201ENST00000244741 GOLGA6L22H0YM25 854 aa20.27■□□□□ 0.83
CDKN1A-201ENST00000244741 MCCP23508 829 aa20.27■□□□□ 0.83
CDKN1A-201ENST00000244741 MRE11P49959 708 aa20.27■□□□□ 0.83
CDKN1A-201ENST00000244741 FAM227BQ96M60 508 aa20.27■□□□□ 0.83
CDKN1A-201ENST00000244741 PRELPP51888 382 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms