RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CCDC91Q7Z6B0 441 aa12.61□□□□□ -0.39
COPA-201ENST00000241704 TEX2Q8IWB9 1127 aa12.61□□□□□ -0.39
COPA-201ENST00000241704 CEP131Q9UPN4 1083 aa12.61□□□□□ -0.39
COPA-201ENST00000241704 CAMSAP1Q5T5Y3 1602 aa12.61□□□□□ -0.39
COPA-201ENST00000241704 RNF113AO15541 343 aaKnown RBP12.61□□□□□ -0.39
COPA-201ENST00000241704 URI1O94763 535 aaPredicted RBP12.61□□□□□ -0.39
COPA-201ENST00000241704 TMEM67Q5HYA8 995 aa12.61□□□□□ -0.39
COPA-201ENST00000241704 HNRNPH2P55795 449 aaKnown RBP12.61□□□□□ -0.39
COPA-201ENST00000241704 DACH1Q9UI36 760 aa12.61□□□□□ -0.39
COPA-201ENST00000241704 SLC4A8Q2Y0W8 1093 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 ANO6Q4KMQ2 910 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 FAM107BQ9H098 131 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 VEZTQ9HBM0 779 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 SH3TC1Q8TE82 1336 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 RIMBP2O15034 1052 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 SFPQP23246 707 aaKnown RBP eCLIP12.6□□□□□ -0.39
COPA-201ENST00000241704 GUCY1B3Q02153 619 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 TYRO3Q06418 890 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 CEP57L1Q8IYX8 460 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 CHAMP1Q96JM3 812 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 ZNF335Q9H4Z2 1342 aaPredicted RBP12.6□□□□□ -0.39
COPA-201ENST00000241704 LMOD1P29536 600 aaPredicted RBP12.6□□□□□ -0.39
COPA-201ENST00000241704 NAP1L1P55209 391 aaKnown RBP12.6□□□□□ -0.39
COPA-201ENST00000241704 FILIP1LQ4L180 1135 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 TNNI3KQ59H18 835 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 CATIPQ7Z7H3 387 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 HELBQ8NG08 1087 aaPredicted RBP12.6□□□□□ -0.39
COPA-201ENST00000241704 SSH3Q8TE77 659 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 FPGT-TNNI3KV9GXZ4 949 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 ERBB3P21860 1342 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 TUBB4AP04350 444 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 CYP7A1P22680 504 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 SSRP1Q08945 709 aaKnown RBP12.6□□□□□ -0.39
COPA-201ENST00000241704 CUL5Q93034 780 aa12.6□□□□□ -0.39
COPA-201ENST00000241704 ZNF215Q9UL58 517 aaPredicted RBP12.6□□□□□ -0.39
COPA-201ENST00000241704 NEURL1BA8MQ27 555 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
COPA-201ENST00000241704 KLHDC4Q8TBB5 520 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 ORC3Q9UBD5 711 aaPredicted RBP12.59□□□□□ -0.39
COPA-201ENST00000241704 STX8Q9UNK0 236 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 TIMM10P62072 90 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 ZSCAN26Q16670 478 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 ZNF772Q68DY9 489 aaPredicted RBP12.59□□□□□ -0.39
COPA-201ENST00000241704 PAF1Q8N7H5 531 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 LAMC1P11047 1609 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 AGLP35573 1532 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 SLFN14P0C7P3 912 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 BEND3Q5T5X7 828 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 PDILTQ8N807 584 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 GIMAP7Q8NHV1 300 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 CARD10Q9BWT7 1032 aa12.59□□□□□ -0.39
COPA-201ENST00000241704 CREB3L3Q68CJ9 461 aa12.58□□□□□ -0.39
COPA-201ENST00000241704 NAA16Q6N069 864 aaPredicted RBP12.58□□□□□ -0.39
COPA-201ENST00000241704 NECAB1Q8N987 351 aa12.58□□□□□ -0.39
COPA-201ENST00000241704 MAGEC2Q9UBF1 373 aaPredicted RBP12.58□□□□□ -0.39
COPA-201ENST00000241704 KIDINS220Q9ULH0 1771 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 F13A1P00488 732 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 BRD2P25440 801 aaKnown RBP12.58□□□□□ -0.4
COPA-201ENST00000241704 CASQ1P31415 396 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 SCLT1Q96NL6 688 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 ARFGAP3Q9NP61 516 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 CTIFO43310 598 aaKnown RBP12.58□□□□□ -0.4
COPA-201ENST00000241704 PDE8AO60658 829 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 RXRBP28702 533 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 METAP2P50579 478 aaKnown RBP eCLIP12.58□□□□□ -0.45e-7■■□□□ 11.4
COPA-201ENST00000241704 STIM1Q13586 685 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 MICU3Q86XE3 530 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 DRC1Q96MC2 740 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 KRT23Q9C075 422 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 ANKRD2Q9GZV1 360 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 CCDC87Q9NVE4 849 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 KDRP35968 1356 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 ITGA6P23229 1130 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 RBM17Q96I25 401 aaKnown RBP12.58□□□□□ -0.4
COPA-201ENST00000241704 DBNDD2Q9BQY9 259 aa12.58□□□□□ -0.4
COPA-201ENST00000241704 RIMBP3CA6NJZ7 1639 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 RIMBP3BA6NNM3 1639 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 RIMBP3Q9UFD9 1639 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 SLC20A2Q08357 652 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 CCDC102AQ96A19 550 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 SRRTQ9BXP5 876 aaKnown RBP12.57□□□□□ -0.4
COPA-201ENST00000241704 CNNM2Q9H8M5 875 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 KLF18A0A0U1RQI7 1052 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 KIF2CQ99661 725 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 TFIP11Q9UBB9 837 aaKnown RBP12.57□□□□□ -0.4
COPA-201ENST00000241704 SLC4A4Q9Y6R1 1079 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 SERPINC1P01008 464 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 PICALMQ13492 652 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 SKIDA1Q1XH10 827 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 CCDC70Q6NSX1 233 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 TMTC2Q8N394 836 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
COPA-201ENST00000241704 GJA3Q9Y6H8 435 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 MED14O60244 1454 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 TCIRG1Q13488 830 aa12.57□□□□□ -0.4
COPA-201ENST00000241704 FAM177A1Q8N128 213 aaPredicted RBP12.57□□□□□ -0.4
COPA-201ENST00000241704 LRRC2Q9BYS8 371 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms