RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CEP63Q96MT8 703 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 RASSF4Q9H2L5 321 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 TRIM75PA6NK02 468 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 SMARCA5O60264 1052 aaPredicted RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 MATR3P43243 847 aaKnown RBP eCLIP4.99□□□□□ -1.614e-11■■□□□ 14.2
CHD9-201ENST00000219084 PLCD1P51178 756 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 MTMR3Q13615 1198 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 CCDC14Q49A88 953 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 CFAP58Q5T655 872 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 KIAA1524Q8TCG1 905 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 CTNNBL1Q8WYA6 563 aaPredicted RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 ZNF608Q9ULD9 1512 aaPredicted RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 SSBP05455 408 aaKnown RBP eCLIP4.99□□□□□ -1.61
CHD9-201ENST00000219084 IQUBQ8NA54 791 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 PAG1Q9NWQ8 432 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 IQSEC3Q9UPP2 1182 aaPredicted RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 LRRIQ1Q96JM4 1722 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 AKR1B15C9JRZ8 316 aaPredicted RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 PPFIA3O75145 1194 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 MYL5Q02045 173 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 IFIT1BQ5T764 474 aaKnown RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 NUTM2GQ5VZR2 741 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 TMEM87BQ96K49 555 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 A0A1W2PP64 1363 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 ATP8B1O43520 1251 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 AKR1B10O60218 316 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 WDR78Q5VTH9 848 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 APBB1IPQ7Z5R6 666 aaPredicted RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 CCDC110Q8TBZ0 833 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 SAMD15Q9P1V8 674 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 CEP83Q9Y592 693 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 RBM8AQ9Y5S9 174 aaKnown RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 MBD5Q9P267 1494 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 IQGAP1P46940 1657 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 MADDQ8WXG6 1647 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 B4DLN1 442 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 CAPN2P17655 700 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 CTNNA2P26232 953 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 RPL13P26373 211 aaKnown RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 PRIM1P49642 420 aaKnown RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 MRPL12P52815 198 aaKnown RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 LINS1Q8NG48 757 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 FERMT2Q96AC1 680 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 TESK2Q96S53 571 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 ALG1Q9BT22 464 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 RGS12O14924 1447 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 MPHOSPH10O00566 681 aaKnown RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 CCDC38Q502W7 563 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 CNNM4Q6P4Q7 775 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 GPR161Q8N6U8 529 aaKnown RBP4.99□□□□□ -1.61
CHD9-201ENST00000219084 NYXQ9GZU5 481 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 PCDHB15Q9Y5E8 787 aa4.99□□□□□ -1.61
CHD9-201ENST00000219084 A0A1B0GUA9 196 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 ARHGAP6O43182 974 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 GIGYF1O75420 1035 aaPredicted RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 TRIM37O94972 964 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 PPFIA1Q13136 1202 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 CCDC174Q6PII3 467 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 IFT20Q8IY31 132 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 SYCE1Q8N0S2 351 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 TRIM7Q9C029 511 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 CLSTN2Q9H4D0 955 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 DNAI1Q9UI46 699 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 CDK12Q9NYV4 1490 aaPredicted RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 ATP2B2Q01814 1243 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 BRD3Q15059 726 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 ERCC6LQ2NKX8 1250 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 MCTP2Q6DN12 878 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 ANKRD13DQ6ZTN6 518 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 TAOK1Q7L7X3 1001 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 MLKLQ8NB16 471 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 NEK11Q8NG66 645 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 BAG1Q99933 345 aaPredicted RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 IQCGQ9H095 443 aaKnown RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 MTUS1Q9ULD2 1270 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 PHF8Q9UPP1 1060 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.98□□□□□ -1.61
CHD9-201ENST00000219084 ZFYVE16Q7Z3T8 1539 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 A0A1W2PRG0 241 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 RANBP6O60518 1105 aaKnown RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 ARID4AP29374 1257 aaPredicted RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 SETDB1Q15047 1291 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 CREB3L3Q68CJ9 461 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 RUFY4Q6ZNE9 571 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 Q6ZUG5 572 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 AFAP1L1Q8TED9 768 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 PHF23Q9BUL5 403 aaPredicted RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 MED4Q9NPJ6 270 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 ATP10AO60312 1499 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 RNF113AO15541 343 aaKnown RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 KRT13P13646 458 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 CHMLP26374 656 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 SKIDA1Q1XH10 827 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 GIMAP6Q6P9H5 292 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 GBP6Q6ZN66 633 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 OTUD6BQ8N6M0 293 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 MAGEF1Q9HAY2 307 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 TRMT1Q9NXH9 659 aaKnown RBP4.98□□□□□ -1.61
CHD9-201ENST00000219084 ANKIB1Q9P2G1 1089 aa4.98□□□□□ -1.61
CHD9-201ENST00000219084 LUC7L2Q9Y383 392 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms