RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 TNS3Q68CZ2 1445 aa11.21□□□□□ -0.61
TUBB1-201ENST00000217133 SEC31AO94979 1220 aaKnown RBP11.21□□□□□ -0.62
TUBB1-201ENST00000217133 ADALQ6DHV7 355 aa11.21□□□□□ -0.62
TUBB1-201ENST00000217133 SYNE3Q6ZMZ3 975 aa11.21□□□□□ -0.62
TUBB1-201ENST00000217133 DDX46Q7L014 1031 aaKnown RBP11.21□□□□□ -0.62
TUBB1-201ENST00000217133 FMR1NBQ8N0W7 255 aaPredicted RBP11.21□□□□□ -0.62
TUBB1-201ENST00000217133 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.21□□□□□ -0.62
TUBB1-201ENST00000217133 CACNA1FO60840 1977 aa11.21□□□□□ -0.62
TUBB1-201ENST00000217133 PXDNQ92626 1479 aa11.21□□□□□ -0.62
TUBB1-201ENST00000217133 EVCP57679 992 aa11.21□□□□□ -0.62
TUBB1-201ENST00000217133 FANCCQ00597 558 aa11.21□□□□□ -0.62
TUBB1-201ENST00000217133 CFAP100Q494V2 611 aa11.21□□□□□ -0.62
TUBB1-201ENST00000217133 CCDC93Q567U6 631 aa11.21□□□□□ -0.62
TUBB1-201ENST00000217133 CHMP4CQ96CF2 233 aa11.21□□□□□ -0.62
TUBB1-201ENST00000217133 TRIM34Q9BYJ4 488 aa11.21□□□□□ -0.62
TUBB1-201ENST00000217133 C1orf141Q5JVX7 400 aa11.2□□□□□ -0.62
TUBB1-201ENST00000217133 UTP14AQ9BVJ6 771 aaKnown RBP11.2□□□□□ -0.62
TUBB1-201ENST00000217133 CHGBP05060 677 aa11.2□□□□□ -0.62
TUBB1-201ENST00000217133 PHLPP2Q6ZVD8 1323 aa11.2□□□□□ -0.62
TUBB1-201ENST00000217133 ZSCAN12O43309 604 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 CBFA2T2O43439 604 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 ATP5JP18859 108 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 UBASH3AP57075 661 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 OTUD7BQ6GQQ9 843 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 CHST3Q7LGC8 479 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 KCNG4Q8TDN1 519 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 CTDNEP1O95476 244 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 KCNJ6P48051 423 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 NLRP12P59046 1061 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 LRRFIP1Q32MZ4 808 aaKnown RBP11.19□□□□□ -0.62
TUBB1-201ENST00000217133 CCDC34Q96HJ3 373 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 A0A1W2PQ27 194 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 A0A1W2PQ64 194 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 A0A1W2PQD8 194 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 EFCAB8A8MWE9 144 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 SPTLC2O15270 562 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 TOP1P11387 765 aaKnown RBP11.19□□□□□ -0.62
TUBB1-201ENST00000217133 OAS2P29728 719 aaKnown RBP11.19□□□□□ -0.62
TUBB1-201ENST00000217133 PLEKHO1Q53GL0 409 aaPredicted RBP11.19□□□□□ -0.62
TUBB1-201ENST00000217133 STOX1Q6ZVD7 989 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 KAZALD1Q96I82 304 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 C8orf76Q96K31 380 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 TMX1Q9H3N1 280 aa11.19□□□□□ -0.62
TUBB1-201ENST00000217133 DBNLQ9UJU6 430 aaKnown RBP11.19□□□□□ -0.62
TUBB1-201ENST00000217133 CAPN2P17655 700 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 KRBA2Q6ZNG9 492 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 PDILTQ8N807 584 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 RTEL1Q9NZ71 1219 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 ZNF202O95125 648 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 ATP1A3P13637 1013 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 GNG11P61952 73 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 RAD51AP2Q09MP3 1159 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 TFCP2Q12800 502 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 ARFGAP3Q9NP61 516 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 PRAMEF22A3QJZ6 481 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 CPLX1O14810 134 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 TADA3O75528 432 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 ZRANB2O95218 330 aaKnown RBP eCLIP11.18□□□□□ -0.62
TUBB1-201ENST00000217133 CASQ1P31415 396 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 SMC1AQ14683 1233 aaKnown RBP11.18□□□□□ -0.62
TUBB1-201ENST00000217133 TNNI3KQ59H18 835 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 CCDC158Q5M9N0 1113 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 PLCD3Q8N3E9 789 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 LINC00301Q8NCQ3 95 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 AK7Q96M32 723 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 BPIFA3Q9BQP9 254 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 EPC1Q9H2F5 836 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 ZCCHC17Q9NP64 241 aaKnown RBP11.18□□□□□ -0.62
TUBB1-201ENST00000217133 CLIC4Q9Y696 253 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 FPGT-TNNI3KV9GXZ4 949 aa11.18□□□□□ -0.62
TUBB1-201ENST00000217133 TULP2O00295 520 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 AKAP4Q5JQC9 854 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 NEUROD6Q96NK8 337 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 CWC15Q9P013 229 aaKnown RBP11.17□□□□□ -0.62
TUBB1-201ENST00000217133 MED1Q15648 1581 aaPredicted RBP11.17□□□□□ -0.62
TUBB1-201ENST00000217133 CRYBG1Q9Y4K1 1723 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 MYL6BP14649 208 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 BTG4Q9NY30 223 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 ATP8B1O43520 1251 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 PDIA3P30101 505 aaKnown RBP11.17□□□□□ -0.62
TUBB1-201ENST00000217133 HSPA1LP34931 641 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 GOLGA8FQ08AF8 430 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 GOLGA8DPQ0D2H9 430 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 OLFM4Q6UX06 510 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 SMARCE1Q969G3 411 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 MYD88Q99836 296 aa11.17□□□□□ -0.62
TUBB1-201ENST00000217133 COL15A1P39059 1388 aa11.16□□□□□ -0.62
TUBB1-201ENST00000217133 CARMIL3Q8ND23 1372 aa11.16□□□□□ -0.62
TUBB1-201ENST00000217133 GOLIM4O00461 696 aa11.16□□□□□ -0.62
TUBB1-201ENST00000217133 EVA1CP58658 441 aa11.16□□□□□ -0.62
TUBB1-201ENST00000217133 ST5P78524 1137 aa11.16□□□□□ -0.62
TUBB1-201ENST00000217133 IPO4Q8TEX9 1081 aaKnown RBP11.16□□□□□ -0.62
TUBB1-201ENST00000217133 JCADQ9P266 1359 aa11.16□□□□□ -0.62
TUBB1-201ENST00000217133 ZNF609O15014 1411 aa11.16□□□□□ -0.62
TUBB1-201ENST00000217133 YEATS4O95619 227 aa11.16□□□□□ -0.62
TUBB1-201ENST00000217133 LMAN1P49257 510 aa11.16□□□□□ -0.62
TUBB1-201ENST00000217133 PPP2R3AQ06190 1150 aa11.16□□□□□ -0.62
TUBB1-201ENST00000217133 PTPN21Q16825 1174 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms