RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 SRP68Q9UHB9 627 aaKnown RBP35.18■■■■□ 3.22
PABPN1-201ENST00000216727 COL4A1P02462 1669 aa35.17■■■■□ 3.22
PABPN1-201ENST00000216727 DOCK2Q92608 1830 aa35.17■■■■□ 3.22
PABPN1-201ENST00000216727 MYO5AQ9Y4I1 1855 aaKnown RBP35.17■■■■□ 3.22
PABPN1-201ENST00000216727 TCRBV5S4A2TA0A5A2 114 aa35.17■■■■□ 3.22
PABPN1-201ENST00000216727 GTF2E1P29083 439 aaPredicted RBP35.17■■■■□ 3.22
PABPN1-201ENST00000216727 FGD1P98174 961 aa35.17■■■■□ 3.22
PABPN1-201ENST00000216727 SMIM5Q71RC9 77 aa35.17■■■■□ 3.22
PABPN1-201ENST00000216727 ZNF532Q9HCE3 1301 aa35.17■■■■□ 3.22
PABPN1-201ENST00000216727 XRCC6P12956 609 aaKnown RBP eCLIP35.16■■■■□ 3.224e-16■■■□□ 18.2
PABPN1-201ENST00000216727 NCLP19338 710 aaKnown RBP35.16■■■■□ 3.22
PABPN1-201ENST00000216727 LARP1BQ659C4 914 aaKnown RBP35.16■■■■□ 3.22
PABPN1-201ENST00000216727 CAVIN1Q6NZI2 390 aaKnown RBP35.16■■■■□ 3.22
PABPN1-201ENST00000216727 CASZ1Q86V15 1759 aa35.16■■■■□ 3.22
PABPN1-201ENST00000216727 SEPT12Q8IYM1 358 aa35.16■■■■□ 3.22
PABPN1-201ENST00000216727 STK3Q13188 491 aa35.15■■■■□ 3.22
PABPN1-201ENST00000216727 WWC3Q9ULE0 1092 aa35.15■■■■□ 3.22
PABPN1-201ENST00000216727 ZNF445P59923 1031 aa35.15■■■■□ 3.22
PABPN1-201ENST00000216727 MAP3K12Q12852 859 aa35.15■■■■□ 3.22
PABPN1-201ENST00000216727 LRRC2Q9BYS8 371 aa35.15■■■■□ 3.22
PABPN1-201ENST00000216727 PFKFB2O60825 505 aa35.14■■■■□ 3.22
PABPN1-201ENST00000216727 ARHGEF1Q92888 912 aaKnown RBP35.14■■■■□ 3.22
PABPN1-201ENST00000216727 BCAMP50895 628 aa35.13■■■■□ 3.21
PABPN1-201ENST00000216727 GAS2L3Q86XJ1 694 aa35.13■■■■□ 3.21
PABPN1-201ENST00000216727 GRPEL1Q9HAV7 217 aa35.13■■■■□ 3.21
PABPN1-201ENST00000216727 UBE4AQ14139 1066 aa35.13■■■■□ 3.21
PABPN1-201ENST00000216727 NBPF5PQ86XG9 351 aaPredicted RBP35.13■■■■□ 3.21
PABPN1-201ENST00000216727 LLPHQ9BRT6 129 aaKnown RBP35.13■■■■□ 3.21
PABPN1-201ENST00000216727 A0A1B0GUL6 1792 aa35.12■■■■□ 3.21
PABPN1-201ENST00000216727 C4BP0C0L5 1744 aa35.12■■■■□ 3.21
PABPN1-201ENST00000216727 FOXD4L6Q3SYB3 417 aaPredicted RBP35.12■■■■□ 3.21
PABPN1-201ENST00000216727 FOXD4L3Q6VB84 417 aaPredicted RBP35.12■■■■□ 3.21
PABPN1-201ENST00000216727 BCL11BQ9C0K0 894 aaPredicted RBP35.12■■■■□ 3.21
PABPN1-201ENST00000216727 ZSCAN23Q3MJ62 389 aa35.11■■■■□ 3.21
PABPN1-201ENST00000216727 TPTE2Q6XPS3 522 aa35.11■■■■□ 3.21
PABPN1-201ENST00000216727 USP48Q86UV5 1035 aa35.11■■■■□ 3.21
PABPN1-201ENST00000216727 TCHHQ07283 1943 aa35.11■■■■□ 3.21
PABPN1-201ENST00000216727 ZNF804BA4D1E1 1349 aa35.11■■■■□ 3.21
PABPN1-201ENST00000216727 ZNF213O14771 459 aa35.11■■■■□ 3.21
PABPN1-201ENST00000216727 NLRP3Q96P20 1036 aa35.11■■■■□ 3.21
PABPN1-201ENST00000216727 VPS37CA5D8V6 355 aaPredicted RBP35.1■■■■□ 3.21
PABPN1-201ENST00000216727 AMIGO3Q86WK7 504 aa35.1■■■■□ 3.21
PABPN1-201ENST00000216727 DTNBO60941 627 aa35.1■■■■□ 3.21
PABPN1-201ENST00000216727 HAND2P61296 217 aa35.1■■■■□ 3.21
PABPN1-201ENST00000216727 SCRN1Q12765 414 aa35.1■■■■□ 3.21
PABPN1-201ENST00000216727 EVCP57679 992 aa35.09■■■■□ 3.21
PABPN1-201ENST00000216727 ZNF274Q96GC6 653 aaPredicted RBP35.09■■■■□ 3.21
PABPN1-201ENST00000216727 STRBPQ96SI9 672 aaKnown RBP35.09■■■■□ 3.21
PABPN1-201ENST00000216727 MINPP1Q9UNW1 487 aa35.09■■■■□ 3.21
PABPN1-201ENST00000216727 BRPF3Q9ULD4 1205 aa35.08■■■■□ 3.21
PABPN1-201ENST00000216727 NSFL1CQ9UNZ2 370 aaKnown RBP35.08■■■■□ 3.21
PABPN1-201ENST00000216727 APOBRQ0VD83 1088 aa35.08■■■■□ 3.21
PABPN1-201ENST00000216727 MB21D2Q8IYB1 491 aaPredicted RBP35.08■■■■□ 3.21
PABPN1-201ENST00000216727 SMARCC2Q8TAQ2 1214 aa35.08■■■■□ 3.21
PABPN1-201ENST00000216727 AIDAQ96BJ3 306 aa35.08■■■■□ 3.21
PABPN1-201ENST00000216727 CHMP4CQ96CF2 233 aa35.08■■■■□ 3.21
PABPN1-201ENST00000216727 GDPD2Q9HCC8 539 aa35.08■■■■□ 3.21
PABPN1-201ENST00000216727 CNPY2Q9Y2B0 182 aa35.08■■■■□ 3.21
PABPN1-201ENST00000216727 ZMYM6O95789 1325 aa35.07■■■■□ 3.21
PABPN1-201ENST00000216727 WDR19Q8NEZ3 1342 aa35.07■■■■□ 3.21
PABPN1-201ENST00000216727 ALX1Q15699 326 aa35.07■■■■□ 3.2
PABPN1-201ENST00000216727 TRAPPC3LQ5T215 181 aa35.07■■■■□ 3.2
PABPN1-201ENST00000216727 MAGEB6Q8N7X4 407 aa35.07■■■■□ 3.2
PABPN1-201ENST00000216727 NCOA7Q8NI08 942 aa35.07■■■■□ 3.2
PABPN1-201ENST00000216727 CELF1Q92879 486 aaKnown RBP35.07■■■■□ 3.2
PABPN1-201ENST00000216727 C4AP0C0L4 1744 aa35.07■■■■□ 3.2
PABPN1-201ENST00000216727 MCM5P33992 734 aa35.06■■■■□ 3.2
PABPN1-201ENST00000216727 GNL3LQ9NVN8 582 aaKnown RBP35.06■■■■□ 3.2
PABPN1-201ENST00000216727 TAF1P21675 1872 aa35.06■■■■□ 3.2
PABPN1-201ENST00000216727 RFC4P35249 363 aa35.05■■■■□ 3.2
PABPN1-201ENST00000216727 CSPP1Q1MSJ5 1256 aa35.05■■■■□ 3.2
PABPN1-201ENST00000216727 TMEM63CQ9P1W3 806 aa35.05■■■■□ 3.2
PABPN1-201ENST00000216727 JAK2O60674 1132 aa35.05■■■■□ 3.2
PABPN1-201ENST00000216727 RPS8P62241 208 aaKnown RBP35.05■■■■□ 3.2
PABPN1-201ENST00000216727 CDC37L1Q7L3B6 337 aa35.05■■■■□ 3.2
PABPN1-201ENST00000216727 RBM27Q9P2N5 1060 aaKnown RBP35.04■■■■□ 3.2
PABPN1-201ENST00000216727 ADRA2BP18089 450 aa35.03■■■■□ 3.2
PABPN1-201ENST00000216727 QTRT2Q9H974 415 aaKnown RBP35.03■■■■□ 3.2
PABPN1-201ENST00000216727 GADD45BO75293 160 aaPredicted RBP35.03■■■■□ 3.2
PABPN1-201ENST00000216727 PDIA3P30101 505 aaKnown RBP35.03■■■■□ 3.2
PABPN1-201ENST00000216727 FAM196AQ6ZSG2 479 aa35.03■■■■□ 3.2
PABPN1-201ENST00000216727 CHST3Q7LGC8 479 aa35.03■■■■□ 3.2
PABPN1-201ENST00000216727 RALYLQ86SE5 291 aaKnown RBP35.03■■■■□ 3.2
PABPN1-201ENST00000216727 PATL2C9JE40 543 aaKnown RBP35.02■■■■□ 3.2
PABPN1-201ENST00000216727 NSUN7Q8NE18 718 aaKnown RBP35.02■■■■□ 3.2
PABPN1-201ENST00000216727 NBPF3Q9H094 633 aa35.02■■■■□ 3.2
PABPN1-201ENST00000216727 APPP05067 770 aa35.01■■■■□ 3.2
PABPN1-201ENST00000216727 HMGN5P82970 282 aaKnown RBP35.01■■■■□ 3.2
PABPN1-201ENST00000216727 DNM1Q05193 864 aaKnown RBP35.01■■■■□ 3.2
PABPN1-201ENST00000216727 PRC1O43663 620 aa35.01■■■■□ 3.19
PABPN1-201ENST00000216727 CAVIN4Q5BKX8 364 aa35.01■■■■□ 3.19
PABPN1-201ENST00000216727 SYAP1Q96A49 352 aaPredicted RBP35.01■■■■□ 3.19
PABPN1-201ENST00000216727 LRRC4BQ9NT99 713 aa35.01■■■■□ 3.19
PABPN1-201ENST00000216727 UBE2HP62256 183 aa35■■■■□ 3.19
PABPN1-201ENST00000216727 PNPLA7Q6ZV29 1317 aa35■■■■□ 3.19
PABPN1-201ENST00000216727 CARMIL3Q8ND23 1372 aa35■■■■□ 3.19
PABPN1-201ENST00000216727 MBD4O95243 580 aa34.99■■■■□ 3.19
PABPN1-201ENST00000216727 TRDNQ13061 729 aa34.99■■■■□ 3.19
PABPN1-201ENST00000216727 GNAT2P19087 354 aa34.99■■■■□ 3.19
PABPN1-201ENST00000216727 GYG1P46976 350 aa34.99■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms